FFCP PHASE1:Mm9::chr5:143668400..143668405,-: Difference between revisions
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{{FFCP|EntrezGene=11461|HGNC=|MCL_coexpression_id=462|UniProt=F8WI82,E9Q2D1,E9QAZ1,B2RRX1,P60710,D3Z2K3|association_with_transcript=0bp_to_ENSMUST00000031564,ENSMUST00000163829,ENSMUST00000167386,NM_007393,uc009ajk.1_5end|description=CAGE_peak_1_at_Actb_5end|id=chr5:143668400..143668405,-|ontology_enrichment_celltype=CL:0000144!8.26e-18!121;CL:0000012!8.26e-18!121;CL:0002371!2.16e-17!118;CL:0000548!1.35e-15!115;CL:0000004!1.35e-15!115;CL:0000255!1.35e-15!115;CL:0000034!6.93e-10!97;CL:0000723!6.01e-09!91;CL:0000048!6.01e-09!91;CL:0000219!9.10e-09!54;CL:0000063!5.79e-08!66;CL:0002321!3.76e-07!70;CL:0000220!3.76e-07!70|ontology_enrichment_celltype_v019_2=CL:0000034,6.93e-10,97;CL:0000723,6.01e-09,91;CL:0000048,6.01e-09,91;CL:0000219,9.10e-09,54;CL:0002321,3.76e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.50e-08!48;UBERON:0002390!1.88e-07!45;UBERON:0003061!1.88e-07!45|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.13e-09,118;UBERON:0000925,3.13e-09,118;UBERON:0006595,3.13e-09,118;UBERON:0001007,3.57e-09,116;UBERON:0001555,3.57e-09,116;UBERON:0007026,3.57e-09,116;UBERON:0002193,1.50e-08,48;UBERON:0002405,1.50e-08,48;UBERON:0005409,1.54e-08,47;UBERON:0004921,1.97e-08,114;UBERON:0002390,1.88e-07,45;UBERON:0003061,1.88e-07,45;UBERON:0000160,2.46e-07,31|phase1_expression=1785.33934752424,16152.3267425878,13946.1816865287,5313.9937284497,7394.22276546798,4381.98475544415,4419.25032214556,7580.7011959315,4396.12784918579,5035.66421929137,4158.71323022929,3920.72184246179,7212.1731498119,8379.77009427541,3237.49377508643,3172.38248946379,2539.40961760517,6692.68756915769,6185.91767212291,5425.82169823782,1798.24037024437,3492.06275373514,2990.47638585167,7920.10490554201,8309.8923880961,13145.318122521,9722.29825331032,8858.88426064764,10261.0746272247,8768.88430473727,7462.78379712559,3338.35625037728,2415.97448563219,1553.1204739513,1375.51141325557,1539.33281601964,1523.10339771727,23313.467426938,18256.6816601431,16454.8747968405,25080.4259551784,23459.1971808978,20063.2298286594,5252.03755548716,5199.82555611134,5413.52790825664,10369.0324866446,7115.68702878863,11741.1280362438,6238.47774169746,3945.51729351084,9862.8634410807,4155.97515205013,5559.90081851696,5669.56629773423,12461.3898221452,8090.2716766708,8449.80290405817,5124.87827003447,6031.02615468045,5279.81559120647,13392.8301300324,11286.0402574465,15288.3962968937,14862.6614293816,16275.6784731853,12664.695871834,13266.2896461426,5135.64280802659,5806.33539576935,5100.38031277101,3829.43709691739,4046.31167023356,4802.37427402149,3856.53421736078,5157.73661166883,1004.25683471442,1756.59471003793,1846.96495587307,5091.47013782413,3996.36324784046,4617.37611661512,1967.12341096373,1520.5845723056,1705.99243642808,3245.03924040698,3310.42632194074,3808.88627599419,4509.57053918444,4627.24662533848,3389.09560190002,2821.32989262197,8273.89118855591,2199.83020911574,2369.0848180142,1450.71106042117,2401.88047309322,6541.62707151359,6122.37677047581,5304.33369254923,1932.0900324965,5275.50148650261,3215.64212509787,2659.38946979346,6406.83586768587,6901.01601581074,6728.02483870175,2616.06686824338,4670.98048311133,2061.11910091509,3067.39406255205,2791.33950516571,2920.51465725072,2307.7143495012,1861.42923395821,1951.97916312385,5162.17251119693,2407.57929271653,8857.60545667409,2555.59269546917,2435.88194861814,2537.35219965662,5416.54458099863,927.822345729593,1157.61194855797,6786.21667161623,3631.35679352543,1632.33533103306,3468.00063727808,1162.67494306023,1627.78714482867,3702.40548500555,1575.02216526222,1554.74998056841,1394.67335508377,1418.15088047527,3244.39845354338,2853.64709185431,1454.16675202736,1341.35638942039,2695.96545774426,2642.72469046277,2748.82847360846,2191.2480513313,1696.69421583581,2034.95833300455,2063.87418515259,1228.32360426885,4063.24109879114,3057.27799807313,3060.84575595605,2941.82592491048,2544.41037766345,2900.94054712965,2720.43984331301,2246.69880384715,1710.59132429504,1950.43978802243,3987.66638701835,2098.80545310224,1919.59580094527,1730.21634857889,1823.40795347729,1370.46287412067,1457.51568255995,1214.29225948663,1467.45550565592,999.044269293502,1182.69164132818,1457.47874609421,996.416738128113,1258.05089179498,1874.07978412441,900.659276300855,1845.92516849591,3317.02727543385,8579.6541189573,6110.92369446118,3415.81133232177,3233.43118231289,3374.39447471901,3909.6351248235,4473.8014860711,5470.50855574498,7585.34704878902,5542.94332123659,4092.99387531239,4397.53490152556,4804.11007070224,7269.65137719534,5483.85460142074,4877.16892327271,3597.05174157519,2708.48948843884,3082.55657065875,2550.12192727902,2489.57412528364,2004.06091754596,2250.14570049245,1550.20177408178,1928.10137661992,1613.54131544146,1125.6306250499,2733.42336694677,2599.09959238188,2713.18624803564,2772.48927901667,2984.56735193616,2797.31960767068,2969.88722690472,2219.79338977701,2938.63080535204,2745.97274467247,3120.4018462004,2357.44462038051,2169.90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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=11461 | |||
|HGNC= | |||
|MCL_coexpression_id=462 | |||
|TSSclassifier=NA | |||
|UniProt=F8WI82,E9Q2D1,E9QAZ1,B2RRX1,P60710,D3Z2K3 | |||
|association_with_transcript=0bp_to_ENSMUST00000031564,ENSMUST00000163829,ENSMUST00000167386,NM_007393,uc009ajk.1_5end | |||
|cluster_id=chr5:143668400..143668405,- | |||
|description=CAGE_peak_1_at_Actb_5end | |||
|id=chr5:143668400..143668405,- | |||
|ontology_enrichment_celltype=CL:0000144!8.26e-18!121;CL:0000012!8.26e-18!121;CL:0002371!2.16e-17!118;CL:0000548!1.35e-15!115;CL:0000004!1.35e-15!115;CL:0000255!1.35e-15!115;CL:0000034!6.93e-10!97;CL:0000723!6.01e-09!91;CL:0000048!6.01e-09!91;CL:0000219!9.10e-09!54;CL:0000063!5.79e-08!66;CL:0002321!3.76e-07!70;CL:0000220!3.76e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,6.93e-10,97;CL:0000723,6.01e-09,91;CL:0000048,6.01e-09,91;CL:0000219,9.10e-09,54;CL:0002321,3.76e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.50e-08!48;UBERON:0002390!1.88e-07!45;UBERON:0003061!1.88e-07!45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.13e-09,118;UBERON:0000925,3.13e-09,118;UBERON:0006595,3.13e-09,118;UBERON:0001007,3.57e-09,116;UBERON:0001555,3.57e-09,116;UBERON:0007026,3.57e-09,116;UBERON:0002193,1.50e-08,48;UBERON:0002405,1.50e-08,48;UBERON:0005409,1.54e-08,47;UBERON:0004921,1.97e-08,114;UBERON:0002390,1.88e-07,45;UBERON:0003061,1.88e-07,45;UBERON:0000160,2.46e-07,31 | |||
|phase1_expression=1785.33934752424,16152.3267425878,13946.1816865287,5313.9937284497,7394.22276546798,4381.98475544415,4419.25032214556,7580.7011959315,4396.12784918579,5035.66421929137,4158.71323022929,3920.72184246179,7212.1731498119,8379.77009427541,3237.49377508643,3172.38248946379,2539.40961760517,6692.68756915769,6185.91767212291,5425.82169823782,1798.24037024437,3492.06275373514,2990.47638585167,7920.10490554201,8309.8923880961,13145.318122521,9722.29825331032,8858.88426064764,10261.0746272247,8768.88430473727,7462.78379712559,3338.35625037728,2415.97448563219,1553.1204739513,1375.51141325557,1539.33281601964,1523.10339771727,23313.467426938,18256.6816601431,16454.8747968405,25080.4259551784,23459.1971808978,20063.2298286594,5252.03755548716,5199.82555611134,5413.52790825664,10369.0324866446,7115.68702878863,11741.1280362438,6238.47774169746,3945.51729351084,9862.8634410807,4155.97515205013,5559.90081851696,5669.56629773423,12461.3898221452,8090.2716766708,8449.80290405817,5124.87827003447,6031.02615468045,5279.81559120647,13392.8301300324,11286.0402574465,15288.3962968937,14862.6614293816,16275.6784731853,12664.695871834,13266.2896461426,5135.64280802659,5806.33539576935,5100.38031277101,3829.43709691739,4046.31167023356,4802.37427402149,3856.53421736078,5157.73661166883,1004.25683471442,1756.59471003793,1846.96495587307,5091.47013782413,3996.36324784046,4617.37611661512,1967.12341096373,1520.5845723056,1705.99243642808,3245.03924040698,3310.42632194074,3808.88627599419,4509.57053918444,4627.24662533848,3389.09560190002,2821.32989262197,8273.89118855591,2199.83020911574,2369.0848180142,1450.71106042117,2401.88047309322,6541.62707151359,6122.37677047581,5304.33369254923,1932.0900324965,5275.50148650261,3215.64212509787,2659.38946979346,6406.83586768587,6901.01601581074,6728.02483870175,2616.06686824338,4670.98048311133,2061.11910091509,3067.39406255205,2791.33950516571,2920.51465725072,2307.7143495012,1861.42923395821,1951.97916312385,5162.17251119693,2407.57929271653,8857.60545667409,2555.59269546917,2435.88194861814,2537.35219965662,5416.54458099863,927.822345729593,1157.61194855797,6786.21667161623,3631.35679352543,1632.33533103306,3468.00063727808,1162.67494306023,1627.78714482867,3702.40548500555,1575.02216526222,1554.74998056841,1394.67335508377,1418.15088047527,3244.39845354338,2853.64709185431,1454.16675202736,1341.35638942039,2695.96545774426,2642.72469046277,2748.82847360846,2191.2480513313,1696.69421583581,2034.95833300455,2063.87418515259,1228.32360426885,4063.24109879114,3057.27799807313,3060.84575595605,2941.82592491048,2544.41037766345,2900.94054712965,2720.43984331301,2246.69880384715,1710.59132429504,1950.43978802243,3987.66638701835,2098.80545310224,1919.59580094527,1730.21634857889,1823.40795347729,1370.46287412067,1457.51568255995,1214.29225948663,1467.45550565592,999.044269293502,1182.69164132818,1457.47874609421,996.416738128113,1258.05089179498,1874.07978412441,900.659276300855,1845.92516849591,3317.02727543385,8579.6541189573,6110.92369446118,3415.81133232177,3233.43118231289,3374.39447471901,3909.6351248235,4473.8014860711,5470.50855574498,7585.34704878902,5542.94332123659,4092.99387531239,4397.53490152556,4804.11007070224,7269.65137719534,5483.85460142074,4877.16892327271,3597.05174157519,2708.48948843884,3082.55657065875,2550.12192727902,2489.57412528364,2004.06091754596,2250.14570049245,1550.20177408178,1928.10137661992,1613.54131544146,1125.6306250499,2733.42336694677,2599.09959238188,2713.18624803564,2772.48927901667,2984.56735193616,2797.31960767068,2969.88722690472,2219.79338977701,2938.63080535204,2745.97274467247,3120.4018462004,2357.44462038051,2169.90514044364,2278.16775431476,1423.6908315433,4118.88762157428,3200.50994480349,3470.33917333294,3342.95971925656,3316.8772790614,4066.38190565752,4207.18330901941,3764.71346812051,3611.73642176105,4174.38793518976,3654.54384286095,3271.20335167028,4212.30476265479,3200.36042111594,7954.24022779661,19729.6347748399,2073.76993932128,2117.26265439621,1397.75343643372,1391.53714322264,5514.44369258061,1056.5908303503,4181.43043192365,4138.26025080007,3099.94269337498,3331.22504345858,3376.2911070446,4192.6464975134,4009.24518938815,3746.42784256511,3365.4801414367,1203.66965131609,2455.27959393263,3154.43216896543,2886.03114582666,3059.37093052567,1072.5807177869,2715.50141539347,2416.16986726229,1929.24136082308,2607.8110160301,2117.30586388983,2863.64391659706,2143.39486899937,2026.68759611714,1592.19318648064,1374.65865581798,1362.42052630855,1112.21619199763,2429.56434176447,2743.30960698087,2585.97632765616,2085.52114763314,2637.89644351702,2102.4428362333,2770.02210704462,3514.20882825406,2997.42380272306,1468.49860264799,2456.64028257511,2165.39942641879,2690.37864227025,3149.63929652276,2959.95284510269,6637.31013089833,1703.68767487256,3923.0245522379,4619.97003935674,4327.44052104805,3431.50818125446,3220.65269933507,4420.45186269643,3661.33538206764,3743.84130111018,3697.40209916355,2298.84684818039,3471.47119355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| |||
|short_description=p1@Actb | |||
}} |
Latest revision as of 16:46, 25 September 2015
Short description: | p1@Actb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Actb_5end |
Coexpression cluster: | MCL_coexpression_mm9:462 |
Association with transcript: | 0bp_to_ENSMUST00000031564, ENSMUST00000163829, ENSMUST00000167386, NM_007393, uc009ajk.1_5end |
EntrezGene: | Actb |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 6.93e-10 | 97 |
somatic stem cell | 6.01e-09 | 91 |
multi fate stem cell | 6.01e-09 | 91 |
motile cell | 9.10e-09 | 54 |
embryonic cell | 3.76e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 3.13e-09 | 118 |
endoderm | 3.13e-09 | 118 |
presumptive endoderm | 3.13e-09 | 118 |
digestive system | 3.57e-09 | 116 |
digestive tract | 3.57e-09 | 116 |
primitive gut | 3.57e-09 | 116 |
hemolymphoid system | 1.50e-08 | 48 |
immune system | 1.50e-08 | 48 |
gastrointestinal system | 1.54e-08 | 47 |
subdivision of digestive tract | 1.97e-08 | 114 |
hematopoietic system | 1.88e-07 | 45 |
blood island | 1.88e-07 | 45 |
intestine | 2.46e-07 | 31 |