FFCP PHASE1:Mm9::chr5:22056068..22056079,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=26429|HGNC=|MCL_coexpression_id=115|UniProt=|association_with_transcript=42bp_to_ENSMUST00000135906_5end|description=CAGE_peak_2_at_Orc5_5end|id=chr5:22056068..22056079,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000049,3.39e-15,19;CL:0000988,5.84e-12,32;CL:0002032,5.84e-12,32;CL:0000037,5.84e-12,32;CL:0000837,5.84e-12,32;CL:0002320,1.19e-10,46;CL:0000134,1.19e-10,46;CL:0000034,2.81e-09,97;CL:0000219,5.46e-09,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002106!6.45e-07!6;UBERON:0004457!6.45e-07!6;UBERON:0000042!6.45e-07!6;UBERON:0004854!6.45e-07!6;UBERON:0009034!6.45e-07!6;UBERON:0002095!6.45e-07!6;UBERON:0004782!6.45e-07!6;UBERON:0003281!6.45e-07!6;UBERON:0009664!6.45e-07!6;UBERON:0002296!6.45e-07!6;UBERON:0005602!6.45e-07!6;UBERON:0001179!6.45e-07!6;UBERON:0006293!6.45e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.19e-10,46|phase1_expression=0,0,0,0,0,0,0,0.387369970324729,0,0.234064526321993,0,0,1.02720437958723,0.262261207256992,0,0.404950534779652,0,0,0,0,0,0.198581902401771,0.522399578277871,0,0,0,0,0,0,0,0,1.90509202037889,0,0,0.577703239502549,0,0.408338712524738,0.418531630736908,0,0.523523743973798,0.588231488031014,0.683045484958446,0.485510353031154,0.377690453926732,0.101376931219515,0,0,0,0,0,0,0,0.167782606057736,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284743361598206,0,0.075726193333184,0,0,0,1.3599426674155,0,0,0,0,0,0.259786004602869,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0.323533699894818,0,0,0,0,0,0,2.39630249011841,5.39912457894067,1.52484272487678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0.136072998302656,0,0.0937017245597288,0,0,0.189106080167819,0,0.219195732427575,0,0,0.205782136407943,0,0,1.28673953557358,1.42081749697796,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0.128867461322093,0,0,0.190225626112559,0,0,0,0,0,0.898819408654221,0,0,0,0.228497025219458,0,0,0,0,0,0,0,0,0,0.166845105716094,0.393117990226406,0.674586337154561,0,0.241177159752417,0,0,0.162135226775035,0,0,0,0,0,0.538192240565737,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0.160550589987792,0,0.163934945376675,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0.141940085208269,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0.258717367565509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0.341741761595705,0.206386867963223,0.555583582109135,0.376736914009382,0.27338845544205,0.457556346413045,1.5298058699447,2.23922323717853,1.24379976423981,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0.314578033277133,0,0,0,0,0.205421914329655,0.129920822977795,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0.221985953374065,0.0897138566094757,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0.341467211508268,0.243106717068294,0.209613162627982,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0,0.114870937911227,0,0.115884325944855,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0.191288332068843,0,0|short_description=p2@Orc5}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=26429 | |||
|HGNC= | |||
|MCL_coexpression_id=115 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=42bp_to_ENSMUST00000135906_5end | |||
|cluster_id=chr5:22056068..22056079,- | |||
|description=CAGE_peak_2_at_Orc5_5end | |||
|id=chr5:22056068..22056079,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,3.39e-15,19;CL:0000988,5.84e-12,32;CL:0002032,5.84e-12,32;CL:0000037,5.84e-12,32;CL:0000837,5.84e-12,32;CL:0002320,1.19e-10,46;CL:0000134,1.19e-10,46;CL:0000034,2.81e-09,97;CL:0000219,5.46e-09,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!6.45e-07!6;UBERON:0004457!6.45e-07!6;UBERON:0000042!6.45e-07!6;UBERON:0004854!6.45e-07!6;UBERON:0009034!6.45e-07!6;UBERON:0002095!6.45e-07!6;UBERON:0004782!6.45e-07!6;UBERON:0003281!6.45e-07!6;UBERON:0009664!6.45e-07!6;UBERON:0002296!6.45e-07!6;UBERON:0005602!6.45e-07!6;UBERON:0001179!6.45e-07!6;UBERON:0006293!6.45e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.19e-10,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0.387369970324729,0,0.234064526321993,0,0,1.02720437958723,0.262261207256992,0,0.404950534779652,0,0,0,0,0,0.198581902401771,0.522399578277871,0,0,0,0,0,0,0,0,1.90509202037889,0,0,0.577703239502549,0,0.408338712524738,0.418531630736908,0,0.523523743973798,0.588231488031014,0.683045484958446,0.485510353031154,0.377690453926732,0.101376931219515,0,0,0,0,0,0,0,0.167782606057736,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284743361598206,0,0.075726193333184,0,0,0,1.3599426674155,0,0,0,0,0,0.259786004602869,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0.323533699894818,0,0,0,0,0,0,2.39630249011841,5.39912457894067,1.52484272487678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0.136072998302656,0,0.0937017245597288,0,0,0.189106080167819,0,0.219195732427575,0,0,0.205782136407943,0,0,1.28673953557358,1.42081749697796,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0.128867461322093,0,0,0.190225626112559,0,0,0,0,0,0.898819408654221,0,0,0,0.228497025219458,0,0,0,0,0,0,0,0,0,0.166845105716094,0.393117990226406,0.674586337154561,0,0.241177159752417,0,0,0.162135226775035,0,0,0,0,0,0.538192240565737,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0.160550589987792,0,0.163934945376675,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0.141940085208269,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0.258717367565509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0.341741761595705,0.206386867963223,0.555583582109135,0.376736914009382,0.27338845544205,0.457556346413045,1.5298058699447,2.23922323717853,1.24379976423981,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0.314578033277133,0,0,0,0,0.205421914329655,0.129920822977795,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0.221985953374065,0.0897138566094757,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0.341467211508268,0.243106717068294,0.209613162627982,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0,0.114870937911227,0,0.115884325944855,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0.191288332068843,0,0 | |||
|short_description=p2@Orc5 | |||
}} |
Latest revision as of 20:07, 25 September 2015
Short description: | p2@Orc5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Orc5_5end |
Coexpression cluster: | MCL_coexpression_mm9:115 |
Association with transcript: | 42bp_to_ENSMUST00000135906_5end |
EntrezGene: | Orc5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 3.39e-15 | 19 |
hematopoietic cell | 5.84e-12 | 32 |
hematopoietic oligopotent progenitor cell | 5.84e-12 | 32 |
hematopoietic stem cell | 5.84e-12 | 32 |
hematopoietic multipotent progenitor cell | 5.84e-12 | 32 |
connective tissue cell | 1.19e-10 | 46 |
mesenchymal cell | 1.19e-10 | 46 |
stem cell | 2.81e-09 | 97 |
motile cell | 5.46e-09 | 54 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.19e-10 | 46 |