FFCP PHASE1:Mm9::chr6:112440825..112440838,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=18430|HGNC=|MCL_coexpression_id=1263|UniProt=F8VQ78|association_with_transcript=45bp_to_ENSMUST00000165435_5end|description=CAGE_peak_1_at_Oxtr_5end|id=chr6:112440825..112440838,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005156!1.60e-11!26;UBERON:0000990!1.60e-11!26;UBERON:0003064!2.21e-11!14;UBERON:0003133!3.76e-11!24;UBERON:0002369!1.09e-10!7;UBERON:0006858!1.09e-10!7;UBERON:0003135!8.44e-09!15;UBERON:0003101!4.50e-08!16;UBERON:0000079!4.50e-08!16;UBERON:0003100!7.57e-08!11;UBERON:0000473!1.26e-07!14;UBERON:0004176!2.20e-07!17;UBERON:0009196!2.20e-07!17;UBERON:0009117!2.20e-07!17;UBERON:0004175!3.37e-07!9;UBERON:0002342!5.68e-07!10;UBERON:0005062!5.68e-07!10;UBERON:0000991!8.01e-07!18;UBERON:0005564!8.01e-07!18|ontology_enrichment_uberon_v019_2=UBERON:0002369,1.24e-26,7;UBERON:0006858,1.24e-26,7;UBERON:0003064,4.87e-19,14;UBERON:0001911,4.86e-16,2;UBERON:0000076,4.86e-16,2;UBERON:0005333,4.86e-16,2;UBERON:0008425,4.86e-16,2;UBERON:0005311,4.86e-16,2;UBERON:0003100,6.20e-11,11;UBERON:0005256,1.14e-07,45|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.202753862439029,2.56965453026354,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599200221036809,0.768436610643109,0,0,0,0.285650984403804,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0.294628585473668,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445326417194474,0.520455980298408,3.65358573974569,3.92046345335299,3.61734337326294,3.17489509266403,9.42499434972566,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125654352112864,0.173824320192276,0,0.20778804455956,0.162241263067758,0,0.248813941220186,6.06534620240819,0,0,0,0,0,0.136072998302656,0,0.0937017245597288,0.258703370739016,0,0.189106080167819,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0.420579897128254,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0.379335801906163,0.342745537829186,0,0.203651327845314,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.44234991113325,10.7615331058846,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,2.41298144854057,0,0,0.659880491890142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0.23467170806371,0,0,0,0.322928853391811,0.0603129249281559,0,0,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0.56369293868419,0.149516546043979,0,0.972255941720238,0.774958940866387,0.337912250981556,0.58678619322877,0,0.104859344425711,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93841237725591,2.38097111547445,0.857473516316263,0.501572104035363,0,0.460325236507177,0,0.171853182343688,0,0,0,0,0,1.03552062350364,0,0,0,0,0,0,0,0,0,0,0,0,0.187283014939765,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0.476872379894642,0,0,0,0.182927972872773,0,0,0,0,0.0985044823755635,0,0,0,0,0.233931608445408,0,0.191288332068843,0,0|short_description=p1@Oxtr}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18430 | |||
|HGNC= | |||
|MCL_coexpression_id=1263 | |||
|TSSclassifier=NA | |||
|UniProt=F8VQ78 | |||
|association_with_transcript=45bp_to_ENSMUST00000165435_5end | |||
|cluster_id=chr6:112440825..112440838,- | |||
|description=CAGE_peak_1_at_Oxtr_5end | |||
|id=chr6:112440825..112440838,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005156!1.60e-11!26;UBERON:0000990!1.60e-11!26;UBERON:0003064!2.21e-11!14;UBERON:0003133!3.76e-11!24;UBERON:0002369!1.09e-10!7;UBERON:0006858!1.09e-10!7;UBERON:0003135!8.44e-09!15;UBERON:0003101!4.50e-08!16;UBERON:0000079!4.50e-08!16;UBERON:0003100!7.57e-08!11;UBERON:0000473!1.26e-07!14;UBERON:0004176!2.20e-07!17;UBERON:0009196!2.20e-07!17;UBERON:0009117!2.20e-07!17;UBERON:0004175!3.37e-07!9;UBERON:0002342!5.68e-07!10;UBERON:0005062!5.68e-07!10;UBERON:0000991!8.01e-07!18;UBERON:0005564!8.01e-07!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,1.24e-26,7;UBERON:0006858,1.24e-26,7;UBERON:0003064,4.87e-19,14;UBERON:0001911,4.86e-16,2;UBERON:0000076,4.86e-16,2;UBERON:0005333,4.86e-16,2;UBERON:0008425,4.86e-16,2;UBERON:0005311,4.86e-16,2;UBERON:0003100,6.20e-11,11;UBERON:0005256,1.14e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.202753862439029,2.56965453026354,0,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599200221036809,0.768436610643109,0,0,0,0.285650984403804,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0.294628585473668,0.142371680799103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445326417194474,0.520455980298408,3.65358573974569,3.92046345335299,3.61734337326294,3.17489509266403,9.42499434972566,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125654352112864,0.173824320192276,0,0.20778804455956,0.162241263067758,0,0.248813941220186,6.06534620240819,0,0,0,0,0,0.136072998302656,0,0.0937017245597288,0.258703370739016,0,0.189106080167819,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0.420579897128254,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0.379335801906163,0.342745537829186,0,0.203651327845314,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.44234991113325,10.7615331058846,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,2.41298144854057,0,0,0.659880491890142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0.23467170806371,0,0,0,0.322928853391811,0.0603129249281559,0,0,0,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0.56369293868419,0.149516546043979,0,0.972255941720238,0.774958940866387,0.337912250981556,0.58678619322877,0,0.104859344425711,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93841237725591,2.38097111547445,0.857473516316263,0.501572104035363,0,0.460325236507177,0,0.171853182343688,0,0,0,0,0,1.03552062350364,0,0,0,0,0,0,0,0,0,0,0,0,0.187283014939765,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0.476872379894642,0,0,0,0.182927972872773,0,0,0,0,0.0985044823755635,0,0,0,0,0.233931608445408,0,0.191288332068843,0,0 | |||
|short_description=p1@Oxtr | |||
}} |
Latest revision as of 11:07, 26 September 2015
Short description: | p1@Oxtr |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Oxtr_5end |
Coexpression cluster: | MCL_coexpression_mm9:1263 |
Association with transcript: | 45bp_to_ENSMUST00000165435_5end |
EntrezGene: | Oxtr |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adrenal gland | 1.24e-26 | 7 |
adrenal/interrenal gland | 1.24e-26 | 7 |
intermediate mesoderm | 4.87e-19 | 14 |
mammary gland | 4.86e-16 | 2 |
external ectoderm | 4.86e-16 | 2 |
mammary bud | 4.86e-16 | 2 |
mammary ridge | 4.86e-16 | 2 |
mammary placode | 4.86e-16 | 2 |
female organism | 6.20e-11 | 11 |
trunk mesenchyme | 1.14e-07 | 45 |