FFCP PHASE1:Mm9::chr11:100002209..100002231,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:100002209..100002231,+
|short_description=p@chr11:100002209..100002231,+
|description=CAGE_peak_at_chr11:100002209..100002231,+
|association_with_transcri...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=72 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:100002209..100002231,+ | |||
|description=CAGE_peak_at_chr11:100002209..100002231,+ | |||
|id=chr11:100002209..100002231,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.96e-19,3;CL:0002202,1.96e-19,3;CL:0000069,1.96e-19,3;CL:0002632,1.96e-19,3;CL:0002368,1.96e-19,3;CL:0000307,1.96e-19,3;CL:0000377,1.96e-19,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!3.38e-12!59;UBERON:0000160!3.06e-10!43;UBERON:0004119!3.58e-10!130;UBERON:0000925!3.58e-10!130;UBERON:0006595!3.58e-10!130;UBERON:0001007!5.25e-09!128;UBERON:0001555!5.25e-09!128;UBERON:0007026!5.25e-09!128;UBERON:0004921!7.84e-08!126;UBERON:0004185!7.84e-08!126;UBERON:0000344!4.71e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,1.96e-19,3;UBERON:0001005,1.96e-19,3;UBERON:0007196,1.96e-19,3;UBERON:0001558,1.96e-19,3;UBERON:0000331,6.00e-18,3;UBERON:0002116,6.00e-18,3;UBERON:0001204,6.00e-18,3;UBERON:0001168,6.00e-18,3;UBERON:0002108,1.28e-13,4;UBERON:0001962,4.84e-13,2;UBERON:0001961,4.84e-13,2;UBERON:0001744,4.84e-13,2;UBERON:0000344,9.10e-10,15;UBERON:0004119,1.15e-09,118;UBERON:0000925,1.15e-09,118;UBERON:0006595,1.15e-09,118;UBERON:0005409,5.03e-09,47;UBERON:0002465,5.41e-09,3;UBERON:0000160,1.49e-08,31;UBERON:0004923,1.99e-08,24;UBERON:0001007,1.99e-08,116;UBERON:0001555,1.99e-08,116;UBERON:0007026,1.99e-08,116;UBERON:0003199,2.79e-07,1 | |||
|phase1_expression=0.160148847104794,0,0.454999239389536,0,0,0,0.934450562382103,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,2.87986361028132,2.75291137280604,0,0.86152399231815,0.646413698057667,5.70070258369122,1.00812051903972,1.10865255327652,0,0,0,0,0.498703936075477,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,20.9996309780878,19.0019899106324,22.7486000256652,0.45673551887624,0,0,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0.247194967734374,0,0,0,0,0,0,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0.505445516867349,0,0,0,0,0.150704817835715,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0.213288250535234,0,0.128867461322093,0.403367049246685,0.22237804384487,0.760902504450237,1.42358718463353,0.823494773620054,1.25667604400135,0.198956472041151,0.19496408711912,0.898819408654221,1.08069024937347,0.796565093017469,0,0.114248512609729,0,0,0.193952487167626,0,0,0,0,0,0.296452627087149,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0.704070744865506,0,0,0.195133647857799,0,0,0,0,0,0.289298117163023,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0.704015124191131,1.0591603543191,0.220528398054962,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.648032044930808,0,0.655087691238533,0.944050424693745,0.41326727862668,2.87931536182433,2.33306951925227,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0.0762068066549998,0,0,0,0,0,0.443971906748129,0.538283139656854,0.167884616364078,0.19318959403219,0,0.36630324853453,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0.238436189947321,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.160148847104794,0,0.454999239389536,0,0,0,0.934450562382103,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,2.87986361028132,2.75291137280604,0,0.86152399231815,0.646413698057667,5.70070258369122,1.00812051903972,1.10865255327652,0,0,0,0,0.498703936075477,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,20.9996309780878,19.0019899106324,22.7486000256652,0.45673551887624,0,0,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0.247194967734374,0,0,0,0,0,0,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0.505445516867349,0,0,0,0,0.150704817835715,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0,0,0.330418782983798,0,0.213288250535234,0,0.128867461322093,0.403367049246685,0.22237804384487,0.760902504450237,1.42358718463353,0.823494773620054,1.25667604400135,0.198956472041151,0.19496408711912,0.898819408654221,1.08069024937347,0.796565093017469,0,0.114248512609729,0,0,0.193952487167626,0,0,0,0,0,0.296452627087149,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0.704070744865506,0,0,0.195133647857799,0,0,0,0,0,0.289298117163023,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0.704015124191131,1.0591603543191,0.220528398054962,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.648032044930808,0,0.655087691238533,0.944050424693745,0.41326727862668,2.87931536182433,2.33306951925227,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0.0762068066549998,0,0,0,0,0,0.443971906748129,0.538283139656854,0.167884616364078,0.19318959403219,0,0.36630324853453,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0.238436189947321,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr11:100002209..100002231,+ | |||
}} | }} |
Latest revision as of 02:52, 5 August 2015
Short description: | p@chr11:100002209..100002231, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:100002209..100002231, + |
Coexpression cluster: | MCL_coexpression_mm9:72 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.96e-19 | 3 |
epithelial cell of tracheobronchial tree | 1.96e-19 | 3 |
branched duct epithelial cell | 1.96e-19 | 3 |
epithelial cell of lower respiratory tract | 1.96e-19 | 3 |
respiratory epithelial cell | 1.96e-19 | 3 |
tracheal epithelial cell | 1.96e-19 | 3 |
tracheoblast | 1.96e-19 | 3 |
Ontology term | p-value | n |
---|---|---|
trachea | 1.96e-19 | 3 |
respiratory airway | 1.96e-19 | 3 |
tracheobronchial tree | 1.96e-19 | 3 |
lower respiratory tract | 1.96e-19 | 3 |
ileal mucosa | 6.00e-18 | 3 |
ileum | 6.00e-18 | 3 |
mucosa of small intestine | 6.00e-18 | 3 |
wall of small intestine | 6.00e-18 | 3 |
small intestine | 1.28e-13 | 4 |
gut-associated lymphoid tissue | 4.84e-13 | 2 |
mucosa-associated lymphoid tissue | 4.84e-13 | 2 |
lymphoid tissue | 4.84e-13 | 2 |
mucosa | 9.10e-10 | 15 |
endoderm-derived structure | 1.15e-09 | 118 |
endoderm | 1.15e-09 | 118 |
presumptive endoderm | 1.15e-09 | 118 |
gastrointestinal system | 5.03e-09 | 47 |
lymphoid system | 5.41e-09 | 3 |
intestine | 1.49e-08 | 31 |
organ component layer | 1.99e-08 | 24 |
digestive system | 1.99e-08 | 116 |
digestive tract | 1.99e-08 | 116 |
primitive gut | 1.99e-08 | 116 |
egg chamber | 2.79e-07 | 1 |