FFCP PHASE1:Mm9::chr6:78320612..78320623,+: Difference between revisions
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{{FFCP|EntrezGene=18489|HGNC=|UniProt=P35230,E9PXT3|association_with_transcript=-255bp_to_ENSMUST00000096904,ENSMUST00000164851,NM_011036,uc009cjw.1_5end|description=CAGE_peak_3_at_Reg3b_5end|id=chr6:78320612..78320623,+|ontology_enrichment_celltype=CL:0000239!1.35e-11!6;CL:0000677!1.35e-11!6;CL:0000212!1.35e-11!6;CL:0000584!1.35e-11!6;CL:0000075!6.73e-10!7;CL:0000473!1.30e-09!3;CL:0000627!1.30e-09!3;CL:0000682!1.30e-09!3;CL:0002563!1.24e-07!9;CL:0002251!1.24e-07!9|ontology_enrichment_celltype_v019_2=CL:0000682,8.96e-18,3;CL:0000473,6.02e-08,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!3.25e-37!43;UBERON:0005409!1.01e-25!59;UBERON:0000344!6.02e-21!15;UBERON:0002108!6.96e-17!16;UBERON:0001242!1.30e-16!13;UBERON:0000060!1.30e-16!13;UBERON:0001262!1.30e-16!13;UBERON:0004786!1.30e-16!13;UBERON:0001045!2.12e-13!13;UBERON:0004923!2.81e-12!24;UBERON:0001007!3.94e-12!128;UBERON:0001555!3.94e-12!128;UBERON:0007026!3.94e-12!128;UBERON:0004119!7.39e-12!130;UBERON:0000925!7.39e-12!130;UBERON:0006595!7.39e-12!130;UBERON:0001264!3.89e-11!12;UBERON:0003922!3.89e-11!12;UBERON:0002114!3.89e-11!12;UBERON:0003923!3.89e-11!12;UBERON:0003924!3.89e-11!12;UBERON:0003921!3.89e-11!12;UBERON:0004921!3.18e-10!126;UBERON:0004185!3.18e-10!126;UBERON:0000331!6.22e-10!3;UBERON:0002116!6.22e-10!3;UBERON:0001204!6.22e-10!3;UBERON:0001168!6.22e-10!3;UBERON:0003350!1.24e-07!9;UBERON:0004808!1.24e-07!9;UBERON:0001277!1.24e-07!9;UBERON:0001155!4.13e-07!2;UBERON:0000059!4.13e-07!2|ontology_enrichment_uberon_v019_2=UBERON:0001155,9.57e-13,2;UBERON:0000059,9.57e-13,2;UBERON:0000160,1.64e-11,31;UBERON:0000331,2.85e-09,3;UBERON:0002116,2.85e-09,3;UBERON:0001204,2.85e-09,3;UBERON:0001168,2.85e-09,3;UBERON:0001264,3.22e-08,12;UBERON:0005409,2.66e-07,47;UBERON:0001153,2.79e-07,1;UBERON:0001045,2.79e-07,1;UBERON:0002108,3.69e-07,4|phase1_expression=0,0,0.909998478779072,0.30246421130683,2.50447864973174,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319984845586813,0.22940928106717,1.14846392823004,2.15380998079537,1.07735616342945,7.22088993934221,2.52030129759931,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.264450566663544,0,0,0,0.201683524623343,0,0,1.42358718463353,0.164698954724011,0,0,0,1.79763881730844,0.648414149624083,1.1948476395262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0,0,0,0,0.307435147943927,0.258428293168221,0,0.356497378384721,1.58018378967908,15.8127912862498,2.06271086496374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p3@Reg3b}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18489 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=P35230,E9PXT3 | |||
|association_with_transcript=-255bp_to_ENSMUST00000096904,ENSMUST00000164851,NM_011036,uc009cjw.1_5end | |||
|cluster_id=chr6:78320612..78320623,+ | |||
|description=CAGE_peak_3_at_Reg3b_5end | |||
|id=chr6:78320612..78320623,+ | |||
|ontology_enrichment_celltype=CL:0000239!1.35e-11!6;CL:0000677!1.35e-11!6;CL:0000212!1.35e-11!6;CL:0000584!1.35e-11!6;CL:0000075!6.73e-10!7;CL:0000473!1.30e-09!3;CL:0000627!1.30e-09!3;CL:0000682!1.30e-09!3;CL:0002563!1.24e-07!9;CL:0002251!1.24e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,8.96e-18,3;CL:0000473,6.02e-08,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.25e-37!43;UBERON:0005409!1.01e-25!59;UBERON:0000344!6.02e-21!15;UBERON:0002108!6.96e-17!16;UBERON:0001242!1.30e-16!13;UBERON:0000060!1.30e-16!13;UBERON:0001262!1.30e-16!13;UBERON:0004786!1.30e-16!13;UBERON:0001045!2.12e-13!13;UBERON:0004923!2.81e-12!24;UBERON:0001007!3.94e-12!128;UBERON:0001555!3.94e-12!128;UBERON:0007026!3.94e-12!128;UBERON:0004119!7.39e-12!130;UBERON:0000925!7.39e-12!130;UBERON:0006595!7.39e-12!130;UBERON:0001264!3.89e-11!12;UBERON:0003922!3.89e-11!12;UBERON:0002114!3.89e-11!12;UBERON:0003923!3.89e-11!12;UBERON:0003924!3.89e-11!12;UBERON:0003921!3.89e-11!12;UBERON:0004921!3.18e-10!126;UBERON:0004185!3.18e-10!126;UBERON:0000331!6.22e-10!3;UBERON:0002116!6.22e-10!3;UBERON:0001204!6.22e-10!3;UBERON:0001168!6.22e-10!3;UBERON:0003350!1.24e-07!9;UBERON:0004808!1.24e-07!9;UBERON:0001277!1.24e-07!9;UBERON:0001155!4.13e-07!2;UBERON:0000059!4.13e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001155,9.57e-13,2;UBERON:0000059,9.57e-13,2;UBERON:0000160,1.64e-11,31;UBERON:0000331,2.85e-09,3;UBERON:0002116,2.85e-09,3;UBERON:0001204,2.85e-09,3;UBERON:0001168,2.85e-09,3;UBERON:0001264,3.22e-08,12;UBERON:0005409,2.66e-07,47;UBERON:0001153,2.79e-07,1;UBERON:0001045,2.79e-07,1;UBERON:0002108,3.69e-07,4 | |||
|phase1_expression=0,0,0.909998478779072,0.30246421130683,2.50447864973174,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319984845586813,0.22940928106717,1.14846392823004,2.15380998079537,1.07735616342945,7.22088993934221,2.52030129759931,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,0.264450566663544,0,0,0,0.201683524623343,0,0,1.42358718463353,0.164698954724011,0,0,0,1.79763881730844,0.648414149624083,1.1948476395262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32745138339963,0,0,0,0,0.307435147943927,0.258428293168221,0,0.356497378384721,1.58018378967908,15.8127912862498,2.06271086496374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@Reg3b | |||
}} |
Latest revision as of 18:06, 1 October 2015
Short description: | p3@Reg3b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Reg3b_5end |
Coexpression cluster: | NA |
Association with transcript: | -255bp_to_ENSMUST00000096904, ENSMUST00000164851, NM_011036, uc009cjw.1_5end |
EntrezGene: | Reg3b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 8.96e-18 | 3 |
defensive cell | 6.02e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
colon | 9.57e-13 | 2 |
large intestine | 9.57e-13 | 2 |
intestine | 1.64e-11 | 31 |
ileal mucosa | 2.85e-09 | 3 |
ileum | 2.85e-09 | 3 |
mucosa of small intestine | 2.85e-09 | 3 |
wall of small intestine | 2.85e-09 | 3 |
pancreas | 3.22e-08 | 12 |
gastrointestinal system | 2.66e-07 | 47 |
caecum | 2.79e-07 | 1 |
midgut | 2.79e-07 | 1 |
small intestine | 3.69e-07 | 4 |