FFCP PHASE1:Mm9::chr7:107646849..107646870,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=22228|HGNC=|MCL_coexpression_id=38|UniProt=|association_with_transcript=0bp_to_ENSMUST00000149808_5end|description=CAGE_peak_4_at_Ucp2_5end|id=chr7:107646849..107646870,+|ontology_enrichment_celltype=CL:0002031!3.40e-09!25;CL:0000988!8.06e-09!32;CL:0002032!8.06e-09!32;CL:0000037!8.06e-09!32;CL:0000566!8.06e-09!32;CL:0000837!8.06e-09!32;CL:0002320!1.01e-07!46;CL:0000134!1.01e-07!46;CL:0000063!5.55e-07!66|ontology_enrichment_celltype_v019_2=CL:0002031,1.93e-10,25;CL:0000988,5.57e-10,32;CL:0002032,5.57e-10,32;CL:0000037,5.57e-10,32;CL:0000837,5.57e-10,32;CL:0002320,1.44e-09,46;CL:0000134,1.44e-09,46;CL:0000763,1.51e-07,16;CL:0000049,1.82e-07,19;CL:0000839,1.95e-07,13;CL:0000219,5.84e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!3.49e-13!48;UBERON:0002405!1.24e-11!70;UBERON:0002390!1.31e-11!45;UBERON:0003061!1.31e-11!45;UBERON:0002371!1.73e-08!16;UBERON:0002384!1.01e-07!46;UBERON:0001474!1.09e-07!22;UBERON:0004765!1.09e-07!22;UBERON:0001434!1.09e-07!22|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.72e-16,48;UBERON:0002405,5.72e-16,48;UBERON:0002390,4.15e-14,45;UBERON:0003061,4.15e-14,45;UBERON:0002384,1.44e-09,46;UBERON:0002371,1.45e-09,16;UBERON:0001474,5.13e-09,22;UBERON:0004765,5.13e-09,22;UBERON:0001434,5.13e-09,22;UBERON:0001007,1.79e-08,116;UBERON:0001555,1.79e-08,116;UBERON:0007026,1.79e-08,116;UBERON:0004119,3.08e-08,118;UBERON:0000925,3.08e-08,118;UBERON:0006595,3.08e-08,118;UBERON:0002204,1.03e-07,32;UBERON:0004921,1.18e-07,114|phase1_expression=0.160148847104794,2.44282785347553,3.18499467572675,1.51232105653415,1.00179145989269,1.84667199103079,5.84031601488814,3.87369970324729,3.801295498095,6.31974221069382,2.39705155515707,2.79202556483677,2.73921167889929,5.94458736449182,2.33176833270964,8.09901069559304,16.7894850750755,4.88966356305268,3.97631857456642,2.12194825899015,1.53077922271926,1.58865521921416,1.56719873483361,12.1594241322989,4.81759490241057,0.57423196411502,3.4460959692726,4.95583835177545,5.51067916423484,0.756090389279792,2.43903561720835,8.25539875497521,4.30545351309199,0,3.17736781726402,2.49351968037739,1.42918549383658,8.78916424547506,5.4693474116666,7.32933241563318,9.41170380849623,6.83045484958446,1.94204141212461,0.251793635951155,0.405507724878058,0.734187008646726,0.782391344348039,1.09012578190223,0.439372365468944,0.777719596297134,1.67983705950435,0,3.18786951509699,0.725362142011344,2.35265659399725,2.31533492432352,0.286533439938757,1.54701627683233,0,0,0,2.03306719241479,0,19.3478439215501,42.5212535903799,31.2611250576284,10.4860038681442,11.9107674649682,0.207379224616955,0.405017814995072,0.210324961351382,1.14260393761521,1.32521124570968,0,0.191690942036473,0,2.20231761998777,0.127687338085188,0.921639199537461,0.131886287730194,0.457438218012048,0,0.837548997004143,0.56276261003168,0.916789486660861,0.294628585473668,0.427115042397309,0,0.454357159999104,0.831287161174641,0.579728977403356,3.44169550792555,0,0,0.649776417447669,0,2.52799956237153,1.53387290320252,3.11743205523443,1.7666978725517,0.281686839553361,0,0,0,3.030874574157,0.506719730950197,0.505524445014783,0.91347103775248,4.91981978929626,2.07818994690755,0.346970653532272,2.13125834818499,1.15307748628029,0.452167921657868,0.352766121407114,0.376999773989026,1.97755974187499,0.86759614151947,5.30766331169925,1.45590164952668,2.87093973998512,3.39412677194655,0,0.292780797011547,0.41889341362691,1.78819938646014,4.07371423320129,0.599902730993408,2.28726408731516,0.299581278809645,0,0,0.173824320192276,0.255715457330331,0.41557608911912,0,0.611036183101898,2.36373244159177,1.26361379216837,3.99839526184301,0.260240885925407,0.459804208866946,0.180062129805349,0.150704817835715,0.0680364991513279,0.12811372028485,0.0937017245597288,2.32833033665114,0.431135985865684,0.756424320671277,0.703804496655795,0.219195732427575,0,0.696504333044333,0.205782136407943,0,2.1066395619397,2.05878325691772,1.42081749697796,1.03562886267751,0.938104239924385,0.36012412292203,0.710234206755631,0.196764231747404,0.617068451549513,0.232533944750408,0.536546802799238,0.467061369468678,0.16455984991348,1.14917224855367,0.972825714550269,2.48539978623065,1.3173006917463,0.939444931322602,0,0,2.97376904685418,2.11560453330835,0.213288250535234,0.232236671860439,0.644337306610467,0.605050573870028,0.667134131534611,0.760902504450237,6.16887780007865,1.31759163779209,1.75934646160189,0.795825888164603,0.19496408711912,8.08937467788799,2.16138049874694,2.78797782556114,1.70701110857774,0.685491075658373,0,1.01825663922657,0.193952487167626,0.701358198903186,0.69560190836683,0.295220295959204,0.627994911365499,0.863780147452604,0,3.00321190288969,3.93117990226406,5.39669069723649,4.46292267054706,4.82354319504834,2.5462585178142,3.74004978686054,2.91843408195064,1.92192989231657,5.75072826109418,0.744281895337007,0.624075346229121,0.252578877947112,0.538192240565737,0.482443521363367,2.21703828199926,0.37898282354097,0.488894929326078,0.678980343100753,0.234690248288502,1.00503754465089,1.6663054862021,1.95133647857799,0.630540576424764,1.7717175171902,0.956728611944923,2.29408640602033,1.20879487306127,2.4590339958857,42.2215595029962,14.1415477792864,6.39293554924747,5.51873492609465,0,0.468846746368813,0.491804836130026,0.252470927204373,1.26203287766503,1.95219372148319,2.36965737506079,2.38968797952552,1.55959071857676,1.13230612315533,0.809621403349789,2.63030272120181,0,0,1.98716119291576,0,0.325773918707152,1.81467135269789,1.32745138339963,1.45668381692989,0.604647113929502,0.943025398779491,3.2483208216885,0,0.258428293168221,1.45413491791002,0,0.632073515871632,0,0,3.06395645178409,0.18006109403131,0.517434735131018,0.643011105094777,1.41872186913819,1.24858172321449,0.658196082408484,2.13125464380219,0.469343416127421,1.27099242518292,0.441056796109924,2.63818004706368,0.484393280087717,0.542816324353403,1.79058516004705,2.9545361954111,4.95517422270746,0.741701208042039,4.78438466233988,1.03193433981611,2.22233432843654,5.65105371014073,6.15124024744613,3.66045077130436,1.69978429993855,1.53946597556024,2.48759952847963,18.1387417422872,0.474503990371703,1.01659733563424,0.216010681643603,1.04544148007234,1.74690050996942,1.21377911746339,1.57041565878138,1.83229159388821,3.75883422546199,1.86401793926078,1.12738587736838,1.04661582230785,0.992750942742586,0.583353565032143,0.645799117388655,1.35164900392623,1.64300134104056,0.911430693907651,0.629156066554265,0.724752362478018,0.576060012515731,2.52808896502543,0.608175645870493,1.23253148597793,1.68897069871134,2.68540043501222,2.38417625737518,1.32214994471966,2.21534290761866,2.1202954489111,2.51482461961499,2.92395936896837,2.82627854145282,2.40529604100824,1.8700304349051,1.36038230169127,0.443971906748129,0.269141569828427,0.335769232728157,1.73870634628971,2.25218970541418,2.19781949120718,1.71494703263253,1.50471631210609,0,0,0,0.68741272937475,0,0,0,0,0.453142408984205,0,0.31136204275253,0,0.682934423016537,0.729320151204882,0.209613162627982,0.183843508450014,0.222246727801615,0.824140228955577,0.320919209591815,0.505394423527595,1.01391719956096,0.754505365544305,1.31098110457835,0.576226371643824,0.459483751644906,0.476293691283074,0.463537303779422,0.77163688185482,0,0.441596760403192,1.37147700954166,1.4198064492747,0.953744759789284,0.436039249896986,0.376437521661322,0.930760686808441,0.548783918618318,0.789209134313529,0.950628796921032,0.561142271657738,0.949080144993393,0.689531376628944,1.63692417267876,0.309873682371932,0.578719832943424,1.49886346762768,0,1.93383948643468,1.72159498861959,1.98532277207564,1.39120701372253|short_description=p4@Ucp2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=22228 | |||
|HGNC= | |||
|MCL_coexpression_id=38 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000149808_5end | |||
|cluster_id=chr7:107646849..107646870,+ | |||
|description=CAGE_peak_4_at_Ucp2_5end | |||
|id=chr7:107646849..107646870,+ | |||
|ontology_enrichment_celltype=CL:0002031!3.40e-09!25;CL:0000988!8.06e-09!32;CL:0002032!8.06e-09!32;CL:0000037!8.06e-09!32;CL:0000566!8.06e-09!32;CL:0000837!8.06e-09!32;CL:0002320!1.01e-07!46;CL:0000134!1.01e-07!46;CL:0000063!5.55e-07!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,1.93e-10,25;CL:0000988,5.57e-10,32;CL:0002032,5.57e-10,32;CL:0000037,5.57e-10,32;CL:0000837,5.57e-10,32;CL:0002320,1.44e-09,46;CL:0000134,1.44e-09,46;CL:0000763,1.51e-07,16;CL:0000049,1.82e-07,19;CL:0000839,1.95e-07,13;CL:0000219,5.84e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.49e-13!48;UBERON:0002405!1.24e-11!70;UBERON:0002390!1.31e-11!45;UBERON:0003061!1.31e-11!45;UBERON:0002371!1.73e-08!16;UBERON:0002384!1.01e-07!46;UBERON:0001474!1.09e-07!22;UBERON:0004765!1.09e-07!22;UBERON:0001434!1.09e-07!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.72e-16,48;UBERON:0002405,5.72e-16,48;UBERON:0002390,4.15e-14,45;UBERON:0003061,4.15e-14,45;UBERON:0002384,1.44e-09,46;UBERON:0002371,1.45e-09,16;UBERON:0001474,5.13e-09,22;UBERON:0004765,5.13e-09,22;UBERON:0001434,5.13e-09,22;UBERON:0001007,1.79e-08,116;UBERON:0001555,1.79e-08,116;UBERON:0007026,1.79e-08,116;UBERON:0004119,3.08e-08,118;UBERON:0000925,3.08e-08,118;UBERON:0006595,3.08e-08,118;UBERON:0002204,1.03e-07,32;UBERON:0004921,1.18e-07,114 | |||
|phase1_expression=0.160148847104794,2.44282785347553,3.18499467572675,1.51232105653415,1.00179145989269,1.84667199103079,5.84031601488814,3.87369970324729,3.801295498095,6.31974221069382,2.39705155515707,2.79202556483677,2.73921167889929,5.94458736449182,2.33176833270964,8.09901069559304,16.7894850750755,4.88966356305268,3.97631857456642,2.12194825899015,1.53077922271926,1.58865521921416,1.56719873483361,12.1594241322989,4.81759490241057,0.57423196411502,3.4460959692726,4.95583835177545,5.51067916423484,0.756090389279792,2.43903561720835,8.25539875497521,4.30545351309199,0,3.17736781726402,2.49351968037739,1.42918549383658,8.78916424547506,5.4693474116666,7.32933241563318,9.41170380849623,6.83045484958446,1.94204141212461,0.251793635951155,0.405507724878058,0.734187008646726,0.782391344348039,1.09012578190223,0.439372365468944,0.777719596297134,1.67983705950435,0,3.18786951509699,0.725362142011344,2.35265659399725,2.31533492432352,0.286533439938757,1.54701627683233,0,0,0,2.03306719241479,0,19.3478439215501,42.5212535903799,31.2611250576284,10.4860038681442,11.9107674649682,0.207379224616955,0.405017814995072,0.210324961351382,1.14260393761521,1.32521124570968,0,0.191690942036473,0,2.20231761998777,0.127687338085188,0.921639199537461,0.131886287730194,0.457438218012048,0,0.837548997004143,0.56276261003168,0.916789486660861,0.294628585473668,0.427115042397309,0,0.454357159999104,0.831287161174641,0.579728977403356,3.44169550792555,0,0,0.649776417447669,0,2.52799956237153,1.53387290320252,3.11743205523443,1.7666978725517,0.281686839553361,0,0,0,3.030874574157,0.506719730950197,0.505524445014783,0.91347103775248,4.91981978929626,2.07818994690755,0.346970653532272,2.13125834818499,1.15307748628029,0.452167921657868,0.352766121407114,0.376999773989026,1.97755974187499,0.86759614151947,5.30766331169925,1.45590164952668,2.87093973998512,3.39412677194655,0,0.292780797011547,0.41889341362691,1.78819938646014,4.07371423320129,0.599902730993408,2.28726408731516,0.299581278809645,0,0,0.173824320192276,0.255715457330331,0.41557608911912,0,0.611036183101898,2.36373244159177,1.26361379216837,3.99839526184301,0.260240885925407,0.459804208866946,0.180062129805349,0.150704817835715,0.0680364991513279,0.12811372028485,0.0937017245597288,2.32833033665114,0.431135985865684,0.756424320671277,0.703804496655795,0.219195732427575,0,0.696504333044333,0.205782136407943,0,2.1066395619397,2.05878325691772,1.42081749697796,1.03562886267751,0.938104239924385,0.36012412292203,0.710234206755631,0.196764231747404,0.617068451549513,0.232533944750408,0.536546802799238,0.467061369468678,0.16455984991348,1.14917224855367,0.972825714550269,2.48539978623065,1.3173006917463,0.939444931322602,0,0,2.97376904685418,2.11560453330835,0.213288250535234,0.232236671860439,0.644337306610467,0.605050573870028,0.667134131534611,0.760902504450237,6.16887780007865,1.31759163779209,1.75934646160189,0.795825888164603,0.19496408711912,8.08937467788799,2.16138049874694,2.78797782556114,1.70701110857774,0.685491075658373,0,1.01825663922657,0.193952487167626,0.701358198903186,0.69560190836683,0.295220295959204,0.627994911365499,0.863780147452604,0,3.00321190288969,3.93117990226406,5.39669069723649,4.46292267054706,4.82354319504834,2.5462585178142,3.74004978686054,2.91843408195064,1.92192989231657,5.75072826109418,0.744281895337007,0.624075346229121,0.252578877947112,0.538192240565737,0.482443521363367,2.21703828199926,0.37898282354097,0.488894929326078,0.678980343100753,0.234690248288502,1.00503754465089,1.6663054862021,1.95133647857799,0.630540576424764,1.7717175171902,0.956728611944923,2.29408640602033,1.20879487306127,2.4590339958857,42.2215595029962,14.1415477792864,6.39293554924747,5.51873492609465,0,0.468846746368813,0.491804836130026,0.252470927204373,1.26203287766503,1.95219372148319,2.36965737506079,2.38968797952552,1.55959071857676,1.13230612315533,0.809621403349789,2.63030272120181,0,0,1.98716119291576,0,0.325773918707152,1.81467135269789,1.32745138339963,1.45668381692989,0.604647113929502,0.943025398779491,3.2483208216885,0,0.258428293168221,1.45413491791002,0,0.632073515871632,0,0,3.06395645178409,0.18006109403131,0.517434735131018,0.643011105094777,1.41872186913819,1.24858172321449,0.658196082408484,2.13125464380219,0.469343416127421,1.27099242518292,0.441056796109924,2.63818004706368,0.484393280087717,0.542816324353403,1.79058516004705,2.9545361954111,4.95517422270746,0.741701208042039,4.78438466233988,1.03193433981611,2.22233432843654,5.65105371014073,6.15124024744613,3.66045077130436,1.69978429993855,1.53946597556024,2.48759952847963,18.1387417422872,0.474503990371703,1.01659733563424,0.216010681643603,1.04544148007234,1.74690050996942,1.21377911746339,1.57041565878138,1.83229159388821,3.75883422546199,1.86401793926078,1.12738587736838,1.04661582230785,0.992750942742586,0.583353565032143,0.645799117388655,1.35164900392623,1.64300134104056,0.911430693907651,0.629156066554265,0.724752362478018,0.576060012515731,2.52808896502543,0.608175645870493,1.23253148597793,1.68897069871134,2.68540043501222,2.38417625737518,1.32214994471966,2.21534290761866,2.1202954489111,2.51482461961499,2.92395936896837,2.82627854145282,2.40529604100824,1.8700304349051,1.36038230169127,0.443971906748129,0.269141569828427,0.335769232728157,1.73870634628971,2.25218970541418,2.19781949120718,1.71494703263253,1.50471631210609,0,0,0,0.68741272937475,0,0,0,0,0.453142408984205,0,0.31136204275253,0,0.682934423016537,0.729320151204882,0.209613162627982,0.183843508450014,0.222246727801615,0.824140228955577,0.320919209591815,0.505394423527595,1.01391719956096,0.754505365544305,1.31098110457835,0.576226371643824,0.459483751644906,0.476293691283074,0.463537303779422,0.77163688185482,0,0.441596760403192,1.37147700954166,1.4198064492747,0.953744759789284,0.436039249896986,0.376437521661322,0.930760686808441,0.548783918618318,0.789209134313529,0.950628796921032,0.561142271657738,0.949080144993393,0.689531376628944,1.63692417267876,0.309873682371932,0.578719832943424,1.49886346762768,0,1.93383948643468,1.72159498861959,1.98532277207564,1.39120701372253 | |||
|short_description=p4@Ucp2 | |||
}} |
Latest revision as of 14:45, 25 September 2015
Short description: | p4@Ucp2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Ucp2_5end |
Coexpression cluster: | MCL_coexpression_mm9:38 |
Association with transcript: | 0bp_to_ENSMUST00000149808_5end |
EntrezGene: | Ucp2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 1.93e-10 | 25 |
hematopoietic cell | 5.57e-10 | 32 |
hematopoietic oligopotent progenitor cell | 5.57e-10 | 32 |
hematopoietic stem cell | 5.57e-10 | 32 |
hematopoietic multipotent progenitor cell | 5.57e-10 | 32 |
connective tissue cell | 1.44e-09 | 46 |
mesenchymal cell | 1.44e-09 | 46 |
myeloid cell | 1.51e-07 | 16 |
common myeloid progenitor | 1.82e-07 | 19 |
myeloid lineage restricted progenitor cell | 1.95e-07 | 13 |
motile cell | 5.84e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 5.72e-16 | 48 |
immune system | 5.72e-16 | 48 |
hematopoietic system | 4.15e-14 | 45 |
blood island | 4.15e-14 | 45 |
connective tissue | 1.44e-09 | 46 |
bone marrow | 1.45e-09 | 16 |
bone element | 5.13e-09 | 22 |
skeletal element | 5.13e-09 | 22 |
skeletal system | 5.13e-09 | 22 |
digestive system | 1.79e-08 | 116 |
digestive tract | 1.79e-08 | 116 |
primitive gut | 1.79e-08 | 116 |
endoderm-derived structure | 3.08e-08 | 118 |
endoderm | 3.08e-08 | 118 |
presumptive endoderm | 3.08e-08 | 118 |
musculoskeletal system | 1.03e-07 | 32 |
subdivision of digestive tract | 1.18e-07 | 114 |