FFCP PHASE1:Mm9::chr7:52721748..52721798,-: Difference between revisions
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{{FFCP|EntrezGene=12028|HGNC=|MCL_coexpression_id=1063|UniProt=Q8K3J2|association_with_transcript=346bp_to_ENSMUST00000169539,uc009gvh.1_5end|description=CAGE_peak_3_at_Bax_5end|id=chr7:52721748..52721798,-|ontology_enrichment_celltype=CL:0000055!9.11e-12!50;CL:0002319!5.06e-09!43;CL:0000221!1.70e-08!44;CL:0000133!1.70e-08!44;CL:0000548!2.66e-08!115;CL:0000004!2.66e-08!115;CL:0000255!2.66e-08!115;CL:0002371!5.18e-08!118;CL:0002321!7.92e-08!70;CL:0000220!7.92e-08!70;CL:0000333!1.22e-07!10;CL:0000095!1.22e-07!10;CL:0000243!1.22e-07!10;CL:0000123!1.22e-07!10;CL:0000125!1.22e-07!10;CL:0000030!1.22e-07!10;CL:0000339!1.22e-07!10;CL:0000107!1.25e-07!9;CL:0000144!3.32e-07!121;CL:0000012!3.32e-07!121;CL:0000393!4.17e-07!39;CL:0000211!4.17e-07!39|ontology_enrichment_celltype_v019_2=CL:0002321,1.77e-20,70;CL:0000333,1.66e-17,10;CL:0000095,1.66e-17,10;CL:0000243,1.66e-17,10;CL:0000123,1.66e-17,10;CL:0000125,1.66e-17,10;CL:0000030,1.66e-17,10;CL:0000339,1.66e-17,10;CL:0000107,1.78e-17,9;CL:0002453,5.85e-15,8;CL:0002319,6.94e-15,43;CL:0000034,2.01e-14,97;CL:0000221,2.01e-14,44;CL:0000133,2.01e-14,44;CL:0000222,8.77e-13,7;CL:0000723,4.42e-12,91;CL:0000048,4.42e-12,91;CL:0000680,1.60e-11,6;CL:0000187,1.60e-11,6;CL:0000056,1.60e-11,6;CL:0000128,2.46e-11,6;CL:0000126,2.46e-11,6;CL:0000127,2.46e-11,6;CL:0000393,1.35e-10,39;CL:0000211,1.35e-10,39;CL:0000219,2.22e-10,54;CL:0000355,2.12e-07,9;CL:0000349,2.57e-07,3;CL:0000351,2.57e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000010!1.34e-08!11;UBERON:0002410!1.25e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000010,5.11e-20,11;UBERON:0002410,1.78e-17,9;UBERON:0007524,1.17e-07,11;UBERON:0003077,1.17e-07,11;UBERON:0007285,1.17e-07,11;UBERON:0001134,2.12e-07,9;UBERON:0002036,2.12e-07,9;UBERON:0002385,2.12e-07,9;UBERON:0000486,2.12e-07,9;UBERON:0007503,2.12e-07,9;UBERON:0001015,2.12e-07,9;UBERON:0002329,2.12e-07,9;UBERON:0003082,2.12e-07,9;UBERON:0003059,2.12e-07,9;UBERON:0007282,2.12e-07,9;UBERON:0004290,2.12e-07,9;UBERON:0009618,2.12e-07,9;UBERON:0000358,2.57e-07,3;UBERON:0000307,2.57e-07,3;UBERON:0007010,2.57e-07,3;UBERON:0000013,2.95e-07,3;UBERON:0010313,8.40e-07,3;UBERON:0002342,8.40e-07,3;UBERON:0002005,8.40e-07,3;UBERON:0005428,8.40e-07,3;UBERON:0005062,8.40e-07,3|phase1_expression=1.12104192973356,0,0,0,0,0,0,0.258246646883153,0.140788722151667,0.234064526321993,0.171217968225505,0.0797721589953364,0,0,0,0,0,0,0.137114433605739,0.42438965179803,0,0.496454756004426,1.04479915655574,0,0,0,0,0,0,0,0,3.17515336729816,0,0,0,0,0,0,0,0.523523743973798,0,0,0,11.7084040717287,11.9624778839027,7.89251034295231,89.1926132556765,5.66865406589161,6.81027166476863,4.47188767870852,10.9189408867783,11.5002051491977,0.167782606057736,0,0.336093799142464,30.3566134522417,3.72493471920384,9.28209766099396,0.202316460859598,0.528990979272033,0,100.297981492463,51.5790981744461,8.09909745553259,9.88866362566974,14.209602298922,16.4780060785123,14.9845139075406,0.311068836925433,0.135005938331691,0,0.285650984403804,0.220868540951614,0.122490799214954,0.0958454710182364,0.919218786610021,0,0.127687338085188,0,0.131886287730194,0.0914876436024097,0,0.279182999001381,0,0,1.17851434189467,0.284743361598206,0.186399445825301,1.28734528666413,2.49386148352392,1.73918693221007,0,0,0,0.649776417447669,0,0,4.26075806445144,3.11743205523443,8.12681021373782,0,5.13305909657271,0,0,3.68034769719064,2.53359865475099,1.01104889002957,0,0,0,0.173485326766136,0.304465478312141,0,0,0.352766121407114,0,1.48316980640624,0.289198713839823,0,0,0,0,0,0.585561594023094,0.628340120440365,0,0,0,0.127070227073065,0.149790639404823,0,0.125654352112864,0.173824320192276,0,0.20778804455956,0.162241263067758,0.203678727700633,0.124406970610093,0,0,0.260240885925407,0,0,0,0.408218994907967,0.12811372028485,0.0937017245597288,0.258703370739016,0.215567992932842,0.189106080167819,0,0.657587197282725,0,0,0,0.398068533636986,0,0,0,0.207125772535502,0.703578179943289,0.180062061461015,0.23674473558521,0.590292695242212,0.462801338662135,0,0.268273401399619,0,0.16455984991348,0.164167464079095,0.0810688095458557,0,0.439100230582101,0.134206418760372,0.210289948564127,0.102904612379284,0,0,0,0.696710015581316,0.38660238396628,0.201683524623343,0.22237804384487,0,0,0.329397909448022,0,0,0,0,0.216138049874694,0,0.948339504765408,0,0,0.203651327845314,0.387904974335251,0.210407459670956,0.442655759869801,0.147610147979602,0.627994911365499,0.123397163921801,0,1.16791574001266,0.786235980452812,0.899448449539415,0.405720242777006,0.241177159752417,0.25462585178142,0,0.648540907100142,0,0,0.372140947668503,0,0.252578877947112,0,0,0,0.189491411770485,0.325929952884052,0.169745085775188,0,0,0,0,0.472905432318573,0.44292937929755,0.318909537314974,0.163863314715738,0.172684981865896,0.144649058581512,0,0.54390568381871,0,0,0.321101179975584,0.234423373184406,0.327869890753351,0,16.4064274096453,17.5697434933487,7.32439552291516,12.1874086955802,14.0363164671908,7.35998980050964,15.7876173653209,21.9191893433484,22.1361155650053,0,0,0,0.162886959353576,0.164970122972535,0,2.6705869977048,0.604647113929502,0.377210159511796,0,0,0,0.363533729477506,0,0,0,0,0,0.18006109403131,0,0.428674070063185,0,0.178368817602071,0.329098041204242,0.304464949114599,2.11204537257339,0.63549621259146,0,0,0,0,0.238744688006273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0.218362563746178,0,0,0,0,0,0,0.149516546043979,0.330916980914195,0,0.129159823477731,0.675824501963113,0,0,0.104859344425711,0,0.288030006257865,0,0.608175645870493,0.513554785824136,0,0.537080087002444,0.198681354781265,0,0.147689527174577,0,0.0762068066549998,0.100826185136841,0.194915761479505,0,0.233753804363138,0,17.9808622232992,27.8112955489375,16.6205770200438,0.19318959403219,0,0.183151624267265,0,0,0,0,0,0.171853182343688,0,0,0,0.45032120322422,0,0,0,0.399024873401031,0.512200817262403,0.243106717068294,0.209613162627982,0.183843508450014,0,0,0,0,0,0,0.0936415074698824,0,0.114870937911227,0,0.115884325944855,0,0,0,0.342869252385415,0,0.238436189947321,0,0.282328141245992,0.338458431566706,0,0,0,0.561142271657738,0.118635018124174,0,0,0.154936841185966,0,0.499621155875892,0,0.214871054048298,0.191288332068843,0.220591419119515,0|short_description=p3@Bax}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12028 | |||
|HGNC= | |||
|MCL_coexpression_id=1063 | |||
|TSSclassifier=NA | |||
|UniProt=Q8K3J2 | |||
|association_with_transcript=346bp_to_ENSMUST00000169539,uc009gvh.1_5end | |||
|cluster_id=chr7:52721748..52721798,- | |||
|description=CAGE_peak_3_at_Bax_5end | |||
|id=chr7:52721748..52721798,- | |||
|ontology_enrichment_celltype=CL:0000055!9.11e-12!50;CL:0002319!5.06e-09!43;CL:0000221!1.70e-08!44;CL:0000133!1.70e-08!44;CL:0000548!2.66e-08!115;CL:0000004!2.66e-08!115;CL:0000255!2.66e-08!115;CL:0002371!5.18e-08!118;CL:0002321!7.92e-08!70;CL:0000220!7.92e-08!70;CL:0000333!1.22e-07!10;CL:0000095!1.22e-07!10;CL:0000243!1.22e-07!10;CL:0000123!1.22e-07!10;CL:0000125!1.22e-07!10;CL:0000030!1.22e-07!10;CL:0000339!1.22e-07!10;CL:0000107!1.25e-07!9;CL:0000144!3.32e-07!121;CL:0000012!3.32e-07!121;CL:0000393!4.17e-07!39;CL:0000211!4.17e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.77e-20,70;CL:0000333,1.66e-17,10;CL:0000095,1.66e-17,10;CL:0000243,1.66e-17,10;CL:0000123,1.66e-17,10;CL:0000125,1.66e-17,10;CL:0000030,1.66e-17,10;CL:0000339,1.66e-17,10;CL:0000107,1.78e-17,9;CL:0002453,5.85e-15,8;CL:0002319,6.94e-15,43;CL:0000034,2.01e-14,97;CL:0000221,2.01e-14,44;CL:0000133,2.01e-14,44;CL:0000222,8.77e-13,7;CL:0000723,4.42e-12,91;CL:0000048,4.42e-12,91;CL:0000680,1.60e-11,6;CL:0000187,1.60e-11,6;CL:0000056,1.60e-11,6;CL:0000128,2.46e-11,6;CL:0000126,2.46e-11,6;CL:0000127,2.46e-11,6;CL:0000393,1.35e-10,39;CL:0000211,1.35e-10,39;CL:0000219,2.22e-10,54;CL:0000355,2.12e-07,9;CL:0000349,2.57e-07,3;CL:0000351,2.57e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!1.34e-08!11;UBERON:0002410!1.25e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,5.11e-20,11;UBERON:0002410,1.78e-17,9;UBERON:0007524,1.17e-07,11;UBERON:0003077,1.17e-07,11;UBERON:0007285,1.17e-07,11;UBERON:0001134,2.12e-07,9;UBERON:0002036,2.12e-07,9;UBERON:0002385,2.12e-07,9;UBERON:0000486,2.12e-07,9;UBERON:0007503,2.12e-07,9;UBERON:0001015,2.12e-07,9;UBERON:0002329,2.12e-07,9;UBERON:0003082,2.12e-07,9;UBERON:0003059,2.12e-07,9;UBERON:0007282,2.12e-07,9;UBERON:0004290,2.12e-07,9;UBERON:0009618,2.12e-07,9;UBERON:0000358,2.57e-07,3;UBERON:0000307,2.57e-07,3;UBERON:0007010,2.57e-07,3;UBERON:0000013,2.95e-07,3;UBERON:0010313,8.40e-07,3;UBERON:0002342,8.40e-07,3;UBERON:0002005,8.40e-07,3;UBERON:0005428,8.40e-07,3;UBERON:0005062,8.40e-07,3 | |||
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0.258246646883153,0.140788722151667,0.234064526321993,0.171217968225505,0.0797721589953364,0,0,0,0,0,0,0.137114433605739,0.42438965179803,0,0.496454756004426,1.04479915655574,0,0,0,0,0,0,0,0,3.17515336729816,0,0,0,0,0,0,0,0.523523743973798,0,0,0,11.7084040717287,11.9624778839027,7.89251034295231,89.1926132556765,5.66865406589161,6.81027166476863,4.47188767870852,10.9189408867783,11.5002051491977,0.167782606057736,0,0.336093799142464,30.3566134522417,3.72493471920384,9.28209766099396,0.202316460859598,0.528990979272033,0,100.297981492463,51.5790981744461,8.09909745553259,9.88866362566974,14.209602298922,16.4780060785123,14.9845139075406,0.311068836925433,0.135005938331691,0,0.285650984403804,0.220868540951614,0.122490799214954,0.0958454710182364,0.919218786610021,0,0.127687338085188,0,0.131886287730194,0.0914876436024097,0,0.279182999001381,0,0,1.17851434189467,0.284743361598206,0.186399445825301,1.28734528666413,2.49386148352392,1.73918693221007,0,0,0,0.649776417447669,0,0,4.26075806445144,3.11743205523443,8.12681021373782,0,5.13305909657271,0,0,3.68034769719064,2.53359865475099,1.01104889002957,0,0,0,0.173485326766136,0.304465478312141,0,0,0.352766121407114,0,1.48316980640624,0.289198713839823,0,0,0,0,0,0.585561594023094,0.628340120440365,0,0,0,0.127070227073065,0.149790639404823,0,0.125654352112864,0.173824320192276,0,0.20778804455956,0.162241263067758,0.203678727700633,0.124406970610093,0,0,0.260240885925407,0,0,0,0.408218994907967,0.12811372028485,0.0937017245597288,0.258703370739016,0.215567992932842,0.189106080167819,0,0.657587197282725,0,0,0,0.398068533636986,0,0,0,0.207125772535502,0.703578179943289,0.180062061461015,0.23674473558521,0.590292695242212,0.462801338662135,0,0.268273401399619,0,0.16455984991348,0.164167464079095,0.0810688095458557,0,0.439100230582101,0.134206418760372,0.210289948564127,0.102904612379284,0,0,0,0.696710015581316,0.38660238396628,0.201683524623343,0.22237804384487,0,0,0.329397909448022,0,0,0,0,0.216138049874694,0,0.948339504765408,0,0,0.203651327845314,0.387904974335251,0.210407459670956,0.442655759869801,0.147610147979602,0.627994911365499,0.123397163921801,0,1.16791574001266,0.786235980452812,0.899448449539415,0.405720242777006,0.241177159752417,0.25462585178142,0,0.648540907100142,0,0,0.372140947668503,0,0.252578877947112,0,0,0,0.189491411770485,0.325929952884052,0.169745085775188,0,0,0,0,0.472905432318573,0.44292937929755,0.318909537314974,0.163863314715738,0.172684981865896,0.144649058581512,0,0.54390568381871,0,0,0.321101179975584,0.234423373184406,0.327869890753351,0,16.4064274096453,17.5697434933487,7.32439552291516,12.1874086955802,14.0363164671908,7.35998980050964,15.7876173653209,21.9191893433484,22.1361155650053,0,0,0,0.162886959353576,0.164970122972535,0,2.6705869977048,0.604647113929502,0.377210159511796,0,0,0,0.363533729477506,0,0,0,0,0,0.18006109403131,0,0.428674070063185,0,0.178368817602071,0.329098041204242,0.304464949114599,2.11204537257339,0.63549621259146,0,0,0,0,0.238744688006273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0.218362563746178,0,0,0,0,0,0,0.149516546043979,0.330916980914195,0,0.129159823477731,0.675824501963113,0,0,0.104859344425711,0,0.288030006257865,0,0.608175645870493,0.513554785824136,0,0.537080087002444,0.198681354781265,0,0.147689527174577,0,0.0762068066549998,0.100826185136841,0.194915761479505,0,0.233753804363138,0,17.9808622232992,27.8112955489375,16.6205770200438,0.19318959403219,0,0.183151624267265,0,0,0,0,0,0.171853182343688,0,0,0,0.45032120322422,0,0,0,0.399024873401031,0.512200817262403,0.243106717068294,0.209613162627982,0.183843508450014,0,0,0,0,0,0,0.0936415074698824,0,0.114870937911227,0,0.115884325944855,0,0,0,0.342869252385415,0,0.238436189947321,0,0.282328141245992,0.338458431566706,0,0,0,0.561142271657738,0.118635018124174,0,0,0.154936841185966,0,0.499621155875892,0,0.214871054048298,0.191288332068843,0.220591419119515,0 | |||
|short_description=p3@Bax | |||
}} |
Latest revision as of 21:18, 26 September 2015
Short description: | p3@Bax |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Bax_5end |
Coexpression cluster: | MCL_coexpression_mm9:1063 |
Association with transcript: | 346bp_to_ENSMUST00000169539, uc009gvh.1_5end |
EntrezGene: | Bax |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.77e-20 | 70 |
migratory neural crest cell | 1.66e-17 | 10 |
neuron associated cell | 1.66e-17 | 10 |
glial cell (sensu Vertebrata) | 1.66e-17 | 10 |
neuron associated cell (sensu Vertebrata) | 1.66e-17 | 10 |
glial cell | 1.66e-17 | 10 |
glioblast | 1.66e-17 | 10 |
glioblast (sensu Vertebrata) | 1.66e-17 | 10 |
autonomic neuron | 1.78e-17 | 9 |
oligodendrocyte precursor cell | 5.85e-15 | 8 |
neural cell | 6.94e-15 | 43 |
stem cell | 2.01e-14 | 97 |
ectodermal cell | 2.01e-14 | 44 |
neurectodermal cell | 2.01e-14 | 44 |
mesodermal cell | 8.77e-13 | 7 |
somatic stem cell | 4.42e-12 | 91 |
multi fate stem cell | 4.42e-12 | 91 |
muscle precursor cell | 1.60e-11 | 6 |
muscle cell | 1.60e-11 | 6 |
myoblast | 1.60e-11 | 6 |
oligodendrocyte | 2.46e-11 | 6 |
macroglial cell | 2.46e-11 | 6 |
astrocyte | 2.46e-11 | 6 |
electrically responsive cell | 1.35e-10 | 39 |
electrically active cell | 1.35e-10 | 39 |
motile cell | 2.22e-10 | 54 |
multi-potent skeletal muscle stem cell | 2.12e-07 | 9 |
extraembryonic cell | 2.57e-07 | 3 |
trophoblast cell | 2.57e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 5.11e-20 | 11 |
autonomic nervous system | 1.78e-17 | 9 |
dense mesenchyme tissue | 1.17e-07 | 11 |
paraxial mesoderm | 1.17e-07 | 11 |
presumptive paraxial mesoderm | 1.17e-07 | 11 |
skeletal muscle tissue | 2.12e-07 | 9 |
striated muscle tissue | 2.12e-07 | 9 |
muscle tissue | 2.12e-07 | 9 |
multilaminar epithelium | 2.12e-07 | 9 |
epithelial vesicle | 2.12e-07 | 9 |
musculature | 2.12e-07 | 9 |
somite | 2.12e-07 | 9 |
myotome | 2.12e-07 | 9 |
presomitic mesoderm | 2.12e-07 | 9 |
presumptive segmental plate | 2.12e-07 | 9 |
dermomyotome | 2.12e-07 | 9 |
trunk paraxial mesoderm | 2.12e-07 | 9 |
blastocyst | 2.57e-07 | 3 |
blastula | 2.57e-07 | 3 |
cleaving embryo | 2.57e-07 | 3 |
sympathetic nervous system | 2.95e-07 | 3 |
neural crest-derived structure | 8.40e-07 | 3 |
neural crest | 8.40e-07 | 3 |
enteric nervous system | 8.40e-07 | 3 |
vagal neural crest | 8.40e-07 | 3 |
neural fold | 8.40e-07 | 3 |