FFCP PHASE1:Mm9::chr8:130882965..130882985,+: Difference between revisions
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{{FFCP|EntrezGene=18186|HGNC=|MCL_coexpression_id=3668|UniProt=P97333|association_with_transcript=0bp_to_ENSMUST00000026917,NM_008737,uc009nzq.2,uc009nzr.2,uc009nzt.2_5end|description=CAGE_peak_1_at_Nrp1_5end|id=chr8:130882965..130882985,+|ontology_enrichment_celltype=CL:0000540!9.75e-08!33;CL:0000047!9.75e-08!33;CL:0000031!9.75e-08!33;CL:0000404!9.75e-08!33;CL:0000393!8.02e-07!39;CL:0000211!8.02e-07!39|ontology_enrichment_celltype_v019_2=CL:0000540,9.54e-08,33;CL:0000047,9.54e-08,33;CL:0000031,9.54e-08,33;CL:0000404,9.54e-08,33;CL:0000393,7.87e-07,39;CL:0000211,7.87e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000025!8.29e-10!114;UBERON:0007100!1.10e-09!18;UBERON:0000948!1.10e-09!18;UBERON:0005498!1.10e-09!18;UBERON:0004140!1.10e-09!18;UBERON:0009881!1.10e-09!18;UBERON:0004141!1.10e-09!18;UBERON:0003084!1.10e-09!18;UBERON:0007005!1.10e-09!18;UBERON:0004139!1.10e-09!18;UBERON:0004291!1.10e-09!18;UBERON:0004535!6.68e-09!23;UBERON:0001009!6.68e-09!23;UBERON:0003103!6.35e-08!43;UBERON:0004111!8.19e-08!122;UBERON:0003914!1.56e-07!47;UBERON:0000479!1.84e-07!349;UBERON:0000477!7.75e-07!154|ontology_enrichment_uberon_v019_2=UBERON:0000025,1.04e-09,114;UBERON:0007100,1.07e-09,18;UBERON:0000948,1.07e-09,18;UBERON:0005498,1.07e-09,18;UBERON:0004140,1.07e-09,18;UBERON:0009881,1.07e-09,18;UBERON:0004141,1.07e-09,18;UBERON:0003084,1.07e-09,18;UBERON:0007005,1.07e-09,18;UBERON:0004139,1.07e-09,18;UBERON:0004291,1.07e-09,18;UBERON:0004535,6.51e-09,23;UBERON:0001009,6.51e-09,23;UBERON:0003103,6.21e-08,43;UBERON:0004111,1.09e-07,122;UBERON:0003914,1.53e-07,47;UBERON:0000479,2.46e-07,349|phase1_expression=7.04654927261093,0,0,0,0,0.16787927191189,0.233612640595526,40.1573535903302,0.422366166455,0.468129052643987,1.19852577757853,0.319088635981346,0.684802919724823,0.174840804837995,0.333109761815663,0.607425802169478,1.39912375625629,1.26184866143295,1.09691546884591,0.42438965179803,12.161190491603,2.48227378002213,1.56719873483361,0,0,0,0,0,0.190023419456374,0,0.221730510655305,0,0,0,0,0.332469290716985,0.204169356262369,0,2.3440060335714,1.0470474879476,0.588231488031014,2.04913645487534,0.485510353031154,9.19046771221714,6.9950082541465,2.38610777810186,9.38869613217647,1.52617609466313,0.878744730937887,0.972149495371417,4.33957907038624,1.43752564364972,0,3.62681071005672,0,8.2323019531503,11.4613375975503,18.5641953219879,24.8849246857305,19.5726662330652,17.1134478946668,5.76035704517525,8.89294796111139,7.64914759689189,10.8775299882367,5.6838409195688,6.89080254192331,4.61061966385865,30.381056406384,38.6116983628635,25.86997024622,13.139945282575,15.0190607847097,7.96190194897201,8.05101956553185,13.7882817991503,12.1127469099328,9.19348834213351,5.83704826373725,21.6293511877518,21.225133315759,20.8365348222704,4.74611098302348,10.6924895906019,13.4462458043593,24.1595440088408,20.9286370774681,42.3126742023432,4.39211921332468,4.23200736597999,57.1033042742305,30.1148356943485,49.6379073606658,15.6513925574967,41.5856907166508,48.8349306936096,10.3928870897496,14.657007741713,9.35229616570328,8.12681021373782,2.81686839553361,8.98285341900225,12.7402619853323,21.3320010945999,3.030874574157,3.54703811665138,5.05524445014783,16.0999270403875,8.2860122767095,8.46120192669501,15.9606500624845,22.8349108734106,17.0655467969483,13.8664829308413,18.6966044345771,5.6549966098354,3.70792451601561,24.7264900333049,0.884610551949874,6.63244084784378,4.85851340612866,6.78825354389311,1.86391761218122,1.17112318804619,2.30391377494801,1.53274233125155,4.67278985573089,2.99951365496704,2.92261522268049,6.74057877321702,3.66000482254901,4.52355667606312,6.08385120672968,4.60287823194595,7.2725815595846,4.70499662896497,14.6648683944455,8.08645308965605,4.29628689337247,4.20883711772948,7.54698569183682,12.1848115349741,9.72335500948886,12.5084998803643,12.654788842147,12.6832583082001,12.9308379892426,6.72628763921441,8.191583731448,8.32066752738405,8.44565395986955,11.836569551089,14.7365042089567,11.8405736617537,7.61393904709391,9.55364480728767,3.51106593656617,0.772043721344145,2.84163499395593,42.2536575972424,35.6479611171266,36.732660538047,45.9284787035308,56.6680987432523,54.1477566234698,60.458825635106,67.3366237513044,49.7420358484142,38.6715647296679,35.2960047770055,42.723262630666,30.4095973844691,51.1551768628148,29.1227928710007,32.1743621303115,48.0564539811258,0.660837565967596,1.85115396664481,23.8882840599462,16.953277045812,10.9537342123779,9.27744213267376,6.67134131534611,5.1360919050391,1.89811624617805,6.91735609840846,4.02136334080431,4.17808591286417,2.9244613067868,1.79763881730844,2.16138049874694,2.19055400579804,14.9837641752935,23.7636906228236,28.1769339182701,24.641810669283,20.752916126936,13.3258057791605,15.4297150583188,8.56138858281692,10.9899109488962,12.3397163921801,22.2339470315362,10.0107063429656,7.07612382407531,2.9232074610031,3.44862206360455,2.17059443777175,2.29163266603278,2.87696137450811,5.83686816390127,3.843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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18186 | |||
|HGNC= | |||
|MCL_coexpression_id=3668 | |||
|TSSclassifier=NA | |||
|UniProt=P97333 | |||
|association_with_transcript=0bp_to_ENSMUST00000026917,NM_008737,uc009nzq.2,uc009nzr.2,uc009nzt.2_5end | |||
|cluster_id=chr8:130882965..130882985,+ | |||
|description=CAGE_peak_1_at_Nrp1_5end | |||
|id=chr8:130882965..130882985,+ | |||
|ontology_enrichment_celltype=CL:0000540!9.75e-08!33;CL:0000047!9.75e-08!33;CL:0000031!9.75e-08!33;CL:0000404!9.75e-08!33;CL:0000393!8.02e-07!39;CL:0000211!8.02e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,9.54e-08,33;CL:0000047,9.54e-08,33;CL:0000031,9.54e-08,33;CL:0000404,9.54e-08,33;CL:0000393,7.87e-07,39;CL:0000211,7.87e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!8.29e-10!114;UBERON:0007100!1.10e-09!18;UBERON:0000948!1.10e-09!18;UBERON:0005498!1.10e-09!18;UBERON:0004140!1.10e-09!18;UBERON:0009881!1.10e-09!18;UBERON:0004141!1.10e-09!18;UBERON:0003084!1.10e-09!18;UBERON:0007005!1.10e-09!18;UBERON:0004139!1.10e-09!18;UBERON:0004291!1.10e-09!18;UBERON:0004535!6.68e-09!23;UBERON:0001009!6.68e-09!23;UBERON:0003103!6.35e-08!43;UBERON:0004111!8.19e-08!122;UBERON:0003914!1.56e-07!47;UBERON:0000479!1.84e-07!349;UBERON:0000477!7.75e-07!154 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000025,1.04e-09,114;UBERON:0007100,1.07e-09,18;UBERON:0000948,1.07e-09,18;UBERON:0005498,1.07e-09,18;UBERON:0004140,1.07e-09,18;UBERON:0009881,1.07e-09,18;UBERON:0004141,1.07e-09,18;UBERON:0003084,1.07e-09,18;UBERON:0007005,1.07e-09,18;UBERON:0004139,1.07e-09,18;UBERON:0004291,1.07e-09,18;UBERON:0004535,6.51e-09,23;UBERON:0001009,6.51e-09,23;UBERON:0003103,6.21e-08,43;UBERON:0004111,1.09e-07,122;UBERON:0003914,1.53e-07,47;UBERON:0000479,2.46e-07,349 | |||
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| |||
|short_description=p1@Nrp1 | |||
}} |
Latest revision as of 18:32, 1 October 2015
Short description: | p1@Nrp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Nrp1_5end |
Coexpression cluster: | MCL_coexpression_mm9:3668 |
Association with transcript: | 0bp_to_ENSMUST00000026917, NM_008737, uc009nzq.2, uc009nzr.2, uc009nzt.2_5end |
EntrezGene: | Nrp1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 9.54e-08 | 33 |
neuronal stem cell | 9.54e-08 | 33 |
neuroblast | 9.54e-08 | 33 |
electrically signaling cell | 9.54e-08 | 33 |
electrically responsive cell | 7.87e-07 | 39 |
electrically active cell | 7.87e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
tube | 1.04e-09 | 114 |
primary circulatory organ | 1.07e-09 | 18 |
heart | 1.07e-09 | 18 |
primitive heart tube | 1.07e-09 | 18 |
primary heart field | 1.07e-09 | 18 |
anterior lateral plate mesoderm | 1.07e-09 | 18 |
heart tube | 1.07e-09 | 18 |
heart primordium | 1.07e-09 | 18 |
cardiac mesoderm | 1.07e-09 | 18 |
cardiogenic plate | 1.07e-09 | 18 |
heart rudiment | 1.07e-09 | 18 |
cardiovascular system | 6.51e-09 | 23 |
circulatory system | 6.51e-09 | 23 |
compound organ | 6.21e-08 | 43 |
anatomical conduit | 1.09e-07 | 122 |
epithelial tube | 1.53e-07 | 47 |
tissue | 2.46e-07 | 349 |