FFCP PHASE1:Mm9::chr11:78312545..78312567,+: Difference between revisions
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|id=chr11:78312545..78312567,+
|short_description=p5@Vtn
|description=CAGE_peak_5_at_Vtn_5end
|association_with_transcript=-25bp_to_ENSMUST00000128479_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=22370 | |EntrezGene=22370 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=16 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-25bp_to_ENSMUST00000128479_5end | |||
|cluster_id=chr11:78312545..78312567,+ | |||
|description=CAGE_peak_5_at_Vtn_5end | |||
|id=chr11:78312545..78312567,+ | |||
|ontology_enrichment_celltype=CL:0000115!3.04e-10!1;CL:0000213!3.04e-10!1;CL:0002078!3.04e-10!1;CL:0002262!3.04e-10!1;CL:1000398!3.04e-10!1;CL:0000181!4.02e-08!5;CL:0000417!4.02e-08!5;CL:0000668!4.02e-08!5;CL:0000412!4.02e-08!5;CL:0000182!4.02e-08!5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!1.69e-24!9;UBERON:0000019!1.69e-24!9;UBERON:0000047!1.69e-24!9;UBERON:0004088!1.69e-24!9;UBERON:0002104!1.69e-24!9;UBERON:0001456!1.69e-24!9;UBERON:0003072!1.69e-24!9;UBERON:0003071!1.69e-24!9;UBERON:0004128!1.69e-24!9;UBERON:0001444!4.35e-20!11;UBERON:0000020!1.97e-18!12;UBERON:0001032!1.97e-18!12;UBERON:0004456!1.97e-18!12;UBERON:0005085!4.98e-17!13;UBERON:0000353!3.04e-10!1;UBERON:0003497!3.04e-10!1;UBERON:0003909!3.04e-10!1;UBERON:0003835!3.04e-10!1;UBERON:0003513!3.04e-10!1;UBERON:0001281!3.04e-10!1;UBERON:0001280!3.04e-10!1;UBERON:0004647!3.04e-10!1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.98e-20,9;UBERON:0000019,1.98e-20,9;UBERON:0000047,1.98e-20,9;UBERON:0010312,1.98e-20,9;UBERON:0004088,1.98e-20,9;UBERON:0002104,1.98e-20,9;UBERON:0001456,1.98e-20,9;UBERON:0003072,1.98e-20,9;UBERON:0004128,1.98e-20,9;UBERON:0003071,1.98e-20,9;UBERON:0001444,5.67e-17,11;UBERON:0000020,1.13e-15,12;UBERON:0001032,1.13e-15,12;UBERON:0004456,1.13e-15,12;UBERON:0000033,1.42e-14,13;UBERON:0005085,1.42e-14,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0.539703191637817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.5694878592851,0,0,0,0,0.0680364991513279,0.2562274405697,0.187403449119458,38.5468022401133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0.539703191637817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.5694878592851,0,0,0,0,0.0680364991513279,0.2562274405697,0.187403449119458,38.5468022401133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p5@Vtn | |||
}} | }} |
Latest revision as of 18:06, 25 September 2015
Short description: | p5@Vtn |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Vtn_5end |
Coexpression cluster: | MCL_coexpression_mm9:16 |
Association with transcript: | -25bp_to_ENSMUST00000128479_5end |
EntrezGene: | Vtn |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 1.98e-20 | 9 |
camera-type eye | 1.98e-20 | 9 |
simple eye | 1.98e-20 | 9 |
immature eye | 1.98e-20 | 9 |
ocular region | 1.98e-20 | 9 |
visual system | 1.98e-20 | 9 |
face | 1.98e-20 | 9 |
optic cup | 1.98e-20 | 9 |
optic vesicle | 1.98e-20 | 9 |
eye primordium | 1.98e-20 | 9 |
subdivision of head | 5.67e-17 | 11 |
sense organ | 1.13e-15 | 12 |
sensory system | 1.13e-15 | 12 |
entire sense organ system | 1.13e-15 | 12 |
head | 1.42e-14 | 13 |
ectodermal placode | 1.42e-14 | 13 |