FFCP PHASE1:Mm9::chr11:86400387..86400441,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:86400387..86400441,-
|short_description=p2@Vmp1
|description=CAGE_peak_2_at_Vmp1_5end
|association_with_transcript=-4bp_to_ENSMUST00000150176_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=75909 | |EntrezGene=75909 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1093 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-4bp_to_ENSMUST00000150176_5end | |||
|cluster_id=chr11:86400387..86400441,- | |||
|description=CAGE_peak_2_at_Vmp1_5end | |||
|id=chr11:86400387..86400441,- | |||
|ontology_enrichment_celltype=CL:0000063!8.36e-21!66;CL:0000219!7.25e-19!54;CL:0002320!6.16e-16!46;CL:0000134!6.16e-16!46;CL:0000144!7.53e-14!121;CL:0000012!7.53e-14!121;CL:0002371!2.62e-12!118;CL:0000548!1.82e-11!115;CL:0000004!1.82e-11!115;CL:0000255!1.82e-11!115;CL:0000988!7.16e-09!32;CL:0002032!7.16e-09!32;CL:0000037!7.16e-09!32;CL:0000566!7.16e-09!32;CL:0000837!7.16e-09!32;CL:0000223!1.15e-08!20;CL:0000066!6.58e-08!25;CL:0000034!1.99e-07!97;CL:0000049!2.98e-07!19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,6.64e-19,54;CL:0002320,5.73e-16,46;CL:0000134,5.73e-16,46;CL:0000988,6.90e-09,32;CL:0002032,6.90e-09,32;CL:0000037,6.90e-09,32;CL:0000837,6.90e-09,32;CL:0000223,1.11e-08,20;CL:0000066,6.37e-08,25;CL:0000034,1.34e-07,97;CL:0000049,2.89e-07,19 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!6.16e-16!46;UBERON:0004119!8.08e-09!130;UBERON:0000925!8.08e-09!130;UBERON:0006595!8.08e-09!130;UBERON:0001007!1.92e-08!128;UBERON:0001555!1.92e-08!128;UBERON:0007026!1.92e-08!128;UBERON:0004921!9.78e-08!126;UBERON:0004185!9.78e-08!126;UBERON:0002204!1.47e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.73e-16,46;UBERON:0004119,4.00e-10,118;UBERON:0000925,4.00e-10,118;UBERON:0006595,4.00e-10,118;UBERON:0001007,1.00e-09,116;UBERON:0001555,1.00e-09,116;UBERON:0007026,1.00e-09,116;UBERON:0004921,5.94e-09,114;UBERON:0002204,1.42e-07,32 | |||
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|phase1_expression=3.04282809499109,32.8036883180999,64.1548927539246,48.9992022317065,39.5707626657614,33.2400958385542,44.3864017131499,65.5946483083207,60.1167843587617,45.4085181064667,85.780202080978,65.7322590121572,9.58724087614752,6.55653018142481,7.99463428357591,17.2103977281352,25.8837894907414,16.4040325986284,13.1629856261509,15.2780274647291,19.474913444595,37.6312705051355,79.1435361090974,114.874559565666,131.451518051488,29.285830169866,41.3531516312712,47.4036711908956,62.8977518400598,23.1867719379136,74.7231820908377,60.327913978665,58.4311548205342,142.633512913895,80.5896019106056,46.3794660550194,49.6131535717557,34.7381253511633,69.5388456626182,32.4584721263755,198.234011466452,52.5945023418003,33.0147040061184,235.42704961433,245.332173551225,149.039962755285,73.5447863687157,29.2153709549798,41.0813161713462,78.9385390241591,37.5163609955972,51.7509231713898,20.4694779390438,26.1130371124084,22.1821907434026,130.173274634189,151.003122847725,145.419530022239,0,0.528990979272033,0,91.4880236586657,133.394219416671,224.97492932035,505.310711271724,263.588122645003,166.877261558751,73.0014780110954,0.207379224616955,0.270011876663381,0.210324961351382,1.71390590642282,0.883474163806454,0.122490799214954,0.575072826109418,0,2.20231761998777,0.127687338085188,0.153606533256243,0.131886287730194,0.365950574409639,0.52091337055676,0.279182999001381,1.12552522006336,0.61119299110724,1.76777151284201,1.13897344639282,0.745597783301202,79.1338720331773,74.1357004647566,75.6546315511379,28.3939879403858,260.429020810068,187.81671068996,198.181807321539,178.31470106474,10.3928870897496,77.2049361278602,68.8432912197602,59.3610485177372,3.80277233397037,80.8456807710202,30.5766287647975,7.11066703153331,230.129976594921,226.503719734738,227.486000256652,58.3479625364396,118.852488594052,11.5784868470563,9.02123699183906,31.3599442661505,17.0655467969483,14.1679282119465,11.170927177892,7.6656620711102,36.0904652892186,15.7613299042704,14.153768831198,5.3383060482645,11.2629174414801,11.1521308221101,57.7814459776179,0,0.209446706813455,53.9014386490128,157.676703849791,124.179865315635,152.484272487678,0.299581278809645,0,0.502617408451458,0.521472960576829,0.255715457330331,0.62336413367868,0.324482526135515,10.3876151127323,29.360045063982,79.8603916650412,3.15662783829711,0.650602214813519,1.14951052216736,0.360124259610698,2.56198190320716,3.46986145671772,1.0249097622788,2.43624483855295,2.06962696591213,0.431135985865684,0.945530400839096,1.58356011747554,2.84954452155847,5.83899223373756,3.1342694986995,4.93877127379064,2.18937693500343,108.843044033551,101.137727496083,130.146882723181,13.8774267598786,14.7751417788091,10.2635375032778,11.3637473080901,8.65762619688577,5.707883176833,4.41814495025775,6.43856163359086,12.0268302638185,12.341988743511,4.26835406605648,2.10778904819225,2.77779976108131,8.12335426576887,0.805238512562231,0.841159794256509,0.308713837137853,155.627246785369,46.2788491661203,3.41261200856374,4.41249676534833,8.63411990858025,8.0673409849337,5.33707305227689,11.4135375667535,19.9302205848695,8.07024878147653,15.0801125280162,16.9113001234978,18.3266241891973,34.1551375288604,34.1498118802017,36.0445704590405,5.50036912763937,3.99869794134051,6.76246414038483,4.2766778847516,2.90928730751439,6.59276706968994,8.41045943752622,4.72352473534727,7.06494275286187,8.76119863844784,11.858105083486,5.33904338291501,6.2898878436225,5.17182858485164,2.84004169943904,4.10001171579109,5.85639459097266,6.32931502391783,19.2940919862292,14.0026320725922,35.9420516318386,9.30352369171258,8.7370548472077,7.82994521636046,10.4050499842709,15.9206362049911,26.0501998134913,3.22135400009824,7.33342393989116,3.39490171550376,3.75504397261603,13.5680068527871,6.9032655856944,22.6355031515047,17.9704064281058,18.1601045511995,11.1618338060241,18.3526912481627,18.6499780415167,18.5150794984335,205.07614615741,203.964631432016,5.4094070032094,5.51873492609465,0.160550589987792,0.468846746368813,1.80328439914343,1.51482556322624,12.304820557234,15.6175497718655,11.2020166821055,21.7461606136822,38.5441706162542,39.3476377796477,24.2886421004937,39.4545408180271,22.5314033429518,1.28528526568723,29.5235377233199,4.27357448801413,5.86393053672874,25.9003093066881,0,3.39892890616974,4.53485335447127,8.11001842950362,6.20133975049623,8.30074899448604,23.0001180919717,13.4507479906677,16.7553767840819,3.16036757935816,9.48767477174989,5.15677716240934,5.44703369206061,1.62054984628179,0.517434735131018,0.857348140126369,1.59606210278046,1.07021290561242,0.658196082408484,5.48036908406279,65.4734065497752,14.6164128896036,60.8658378631695,11.7069239588451,14.6932628293274,7.84068024066026,4.53614907211919,2.62625439592098,24.7758711135373,0.370850604021019,21.5297309805294,9.70018279427146,13.8895895527284,13.1857919903284,12.3024804948923,14.6418030852174,251.908033250894,190.89378096947,196.796762697499,105.013767981662,1.26534397432454,6.09958401380546,14.9047370334086,16.936151977172,20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| ||
|short_description=p2@Vmp1 | |||
}} | }} |
Latest revision as of 21:36, 25 September 2015
Short description: | p2@Vmp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Vmp1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1093 |
Association with transcript: | -4bp_to_ENSMUST00000150176_5end |
EntrezGene: | Vmp1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 6.64e-19 | 54 |
connective tissue cell | 5.73e-16 | 46 |
mesenchymal cell | 5.73e-16 | 46 |
hematopoietic cell | 6.90e-09 | 32 |
hematopoietic oligopotent progenitor cell | 6.90e-09 | 32 |
hematopoietic stem cell | 6.90e-09 | 32 |
hematopoietic multipotent progenitor cell | 6.90e-09 | 32 |
endodermal cell | 1.11e-08 | 20 |
epithelial cell | 6.37e-08 | 25 |
stem cell | 1.34e-07 | 97 |
common myeloid progenitor | 2.89e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 5.73e-16 | 46 |
endoderm-derived structure | 4.00e-10 | 118 |
endoderm | 4.00e-10 | 118 |
presumptive endoderm | 4.00e-10 | 118 |
digestive system | 1.00e-09 | 116 |
digestive tract | 1.00e-09 | 116 |
primitive gut | 1.00e-09 | 116 |
subdivision of digestive tract | 5.94e-09 | 114 |
musculoskeletal system | 1.42e-07 | 32 |