FFCP PHASE1:Mm9::chr11:93827246..93827270,-: Difference between revisions
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|id=chr11:93827246..93827270,-
|short_description=p2@Nme1
|description=CAGE_peak_2_at_Nme1_5end
|association_with_transcript=86bp_to_ENSMUST00000021220_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=18102 | |EntrezGene=18102 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=16 | |||
|TSSclassifier=NA | |||
|UniProt=Q5NC80 | |UniProt=Q5NC80 | ||
|association_with_transcript=86bp_to_ENSMUST00000021220_5end | |||
|cluster_id=chr11:93827246..93827270,- | |||
|description=CAGE_peak_2_at_Nme1_5end | |||
|id=chr11:93827246..93827270,- | |||
|ontology_enrichment_celltype=CL:0000055!2.94e-07!50;CL:0002319!7.45e-07!43;CL:0000221!8.01e-07!44;CL:0000133!8.01e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,3.14e-08,43;CL:0000333,3.85e-08,10;CL:0000095,3.85e-08,10;CL:0000243,3.85e-08,10;CL:0000123,3.85e-08,10;CL:0000125,3.85e-08,10;CL:0000030,3.85e-08,10;CL:0000339,3.85e-08,10;CL:0000221,5.15e-08,44;CL:0000133,5.15e-08,44;CL:0002614,1.13e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,1.13e-07,3;UBERON:0009663,1.13e-07,3;UBERON:0009661,1.13e-07,3;UBERON:0000125,1.13e-07,3;UBERON:0002308,1.13e-07,3 | |||
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|short_description=p2@Nme1 | |||
}} | }} |
Latest revision as of 23:29, 25 September 2015
Short description: | p2@Nme1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Nme1_5end |
Coexpression cluster: | MCL_coexpression_mm9:16 |
Association with transcript: | 86bp_to_ENSMUST00000021220_5end |
EntrezGene: | Nme1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 3.14e-08 | 43 |
migratory neural crest cell | 3.85e-08 | 10 |
neuron associated cell | 3.85e-08 | 10 |
glial cell (sensu Vertebrata) | 3.85e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 3.85e-08 | 10 |
glial cell | 3.85e-08 | 10 |
glioblast | 3.85e-08 | 10 |
glioblast (sensu Vertebrata) | 3.85e-08 | 10 |
ectodermal cell | 5.15e-08 | 44 |
neurectodermal cell | 5.15e-08 | 44 |
neuron of the substantia nigra | 1.13e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
substantia nigra | 1.13e-07 | 3 |
telencephalic nucleus | 1.13e-07 | 3 |
midbrain nucleus | 1.13e-07 | 3 |
neural nucleus | 1.13e-07 | 3 |
nucleus of brain | 1.13e-07 | 3 |