FFCP PHASE1:Mm9::chr13:47218088..47218130,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr13:47218088..47218130,+
|short_description=p4@Rnf144b
|description=CAGE_peak_4_at_Rnf144b_5end
|association_with_transcript=0bp_to_ENSMUST00000068891,NM_1460...") |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=218215 | |EntrezGene=218215 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=8 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BKD6 | |UniProt=Q8BKD6 | ||
|association_with_transcript=0bp_to_ENSMUST00000068891,NM_146042,uc007qhx.2_5end | |||
|cluster_id=chr13:47218088..47218130,+ | |||
|description=CAGE_peak_4_at_Rnf144b_5end | |||
|id=chr13:47218088..47218130,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.60e-08!22;UBERON:0007499!1.60e-08!22;UBERON:0006925!1.60e-08!22;UBERON:0009497!1.60e-08!22;UBERON:0000015!1.60e-08!22;UBERON:0002423!1.60e-08!22;UBERON:0006235!1.60e-08!22;UBERON:0008835!1.60e-08!22;UBERON:0003894!1.60e-08!22;UBERON:0004161!1.60e-08!22;UBERON:0008836!1.60e-08!22;UBERON:0009854!9.97e-08!23;UBERON:0009856!9.97e-08!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.32e-15,22;UBERON:0007499,3.32e-15,22;UBERON:0006925,3.32e-15,22;UBERON:0009497,3.32e-15,22;UBERON:0000015,3.32e-15,22;UBERON:0002423,3.32e-15,22;UBERON:0006235,3.32e-15,22;UBERON:0008835,3.32e-15,22;UBERON:0003894,3.32e-15,22;UBERON:0004161,3.32e-15,22;UBERON:0008836,3.32e-15,22;UBERON:0009854,2.58e-14,23;UBERON:0009856,2.58e-14,23;UBERON:0002365,9.38e-13,25;UBERON:0002330,9.38e-13,25 | |||
|phase1_expression=0,0.697950815278722,0,0.60492842261366,0,0.33575854382378,0.934450562382103,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.765389611359628,0,0,0.319984845586813,0,0,0.430761996159075,0.215471232685889,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367093504323363,0,0.436050312760893,0.219686182734472,0.972149495371417,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0.383062014255563,0.46081959976873,0,0,0,0.279182999001381,0.56276261003168,0.30559649555362,0,0,0,0,0,0.289864488701678,4.30211938490693,0,0,9.09686984426737,4.92829575807069,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0.304465478312141,0.922461989024234,0.452167921657868,0.117588707135705,0,0,0.86759614151947,0,2.58826959915855,0.662524555381181,2.90925151881133,0,0,0,0,0,0,0,0.898743836428936,0.915001205637253,0,1.73824320192276,0.511430914660661,0.62336413367868,0.486723789203273,0.509196819251581,0.746441823660558,0,0.841767423545896,0,0.689706313300419,0.540186389416048,1.80845781402858,2.38127747029647,2.43416068541215,1.78033276663485,0.776110112217047,0,0,0.879755620819744,0.219195732427575,0.556094498451196,1.0447564995665,1.64625709126355,0.398068533636986,0,0,0,0.414251545071004,0.469052119962192,0.720248245844059,0.23674473558521,0.590292695242212,0.617068451549513,0.232533944750408,0.536546802799238,0.233530684734339,0.493679549740441,0.164167464079095,0.0810688095458557,0.292399974850665,0.658650345873152,0.268412837520744,0.630869845692382,0,0,0.264450566663544,0,0,0.257734922644187,0,0,0.190225626112559,0,0.164698954724011,0,0.397912944082302,0,0.898819408654221,0,0,0,0.342745537829186,1.1270773567308,0,0.387904974335251,0.49095073923223,0.189709611372772,0.147610147979602,0,0.123397163921801,5.92905254174298,0,0.196558995113203,0.449724224769707,1.62288097110802,3.13530307678142,3.05551022137704,4.89083433666378,5.99900339067631,7.96228098245436,8.62609239164127,12.2806512730606,14.0416952901552,17.9331003342449,10.225652570749,13.0259750768109,0,0,0.162964976442026,0.509235257325564,0.469380496577004,0.167506257441816,0,0,0.315270288212382,0,0,0.327726629431476,0,0.144649058581512,0,0,0,0,0.642202359951168,0.117211686592203,0,1.00988370881749,1.57754109708128,1.17131623288992,0.430846795465598,0.238968797952552,0.222798674082394,0.283076530788832,0,0.292255857911312,2.37172666767914,0,1.70328102249922,1.06839362200353,0.977321756121456,0.494910368917606,1.32745138339963,0,0.604647113929502,0.188605079755898,0.590603785761546,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0.164549020602121,0.608929898229199,0.469343416127421,0.21183207086382,0.220528398054962,0,0.968786560175433,0.241251699712623,0.119372344003136,0,0,0.370850604021019,0,0.412773735926445,0,0,0,0,0.169978429993855,0.279902904647316,0.138199973804424,0,0,0.203319467126849,0.648032044930808,0,0.655087691238533,0.269728692769641,1.23980183588004,0,0,0,1.12738587736838,0.747582730219894,0.827292452285488,0.388902376688095,0.904118764344118,0.675824501963113,1.5256441023948,2.21347454234715,5.7672639434141,3.8653459332161,2.88030006257865,0,0,0,0,0,0.39736270956253,0,0,0.100966449948148,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0,0.226730383615211,0.221985953374065,0,0.167884616364078,0,0.750729901804728,0.915758121336325,0.643105137237198,0,1.12950368523413,0,0.572895513439397,0.515559547031063,5.48066015816514,2.2661816921691,2.02506750069542,4.5032120322422,2.71885445390523,1.55328093525546,0,0,0.170733605754134,1.45864030240976,0.419226325255965,1.10306105070008,2.00022055021454,2.26638562962784,0.320919209591815,1.76888048234658,2.02783439912192,1.32038438970253,1.87283014939765,1.47257850531199,0.746661096422973,1.42888107384922,1.62238056322798,0.578727661391115,1.23625770240992,0.883193520806384,0.685738504770831,1.59728225543404,0.953744759789284,0.726732083161643,1.50575008664529,1.77690676572521,1.64635175585495,1.31534855718921,1.22223702461276,0.561142271657738,0.949080144993393,0.788035859004508,1.63692417267876,0.929621047115796,1.73615949883027,1.24905288968973,1.87145286756327,2.57845264857958,2.48674831689496,1.54413993383661,1.39120701372253 | |phase1_expression=0,0.697950815278722,0,0.60492842261366,0,0.33575854382378,0.934450562382103,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.765389611359628,0,0,0.319984845586813,0,0,0.430761996159075,0.215471232685889,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367093504323363,0,0.436050312760893,0.219686182734472,0.972149495371417,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0.383062014255563,0.46081959976873,0,0,0,0.279182999001381,0.56276261003168,0.30559649555362,0,0,0,0,0,0.289864488701678,4.30211938490693,0,0,9.09686984426737,4.92829575807069,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0.304465478312141,0.922461989024234,0.452167921657868,0.117588707135705,0,0,0.86759614151947,0,2.58826959915855,0.662524555381181,2.90925151881133,0,0,0,0,0,0,0,0.898743836428936,0.915001205637253,0,1.73824320192276,0.511430914660661,0.62336413367868,0.486723789203273,0.509196819251581,0.746441823660558,0,0.841767423545896,0,0.689706313300419,0.540186389416048,1.80845781402858,2.38127747029647,2.43416068541215,1.78033276663485,0.776110112217047,0,0,0.879755620819744,0.219195732427575,0.556094498451196,1.0447564995665,1.64625709126355,0.398068533636986,0,0,0,0.414251545071004,0.469052119962192,0.720248245844059,0.23674473558521,0.590292695242212,0.617068451549513,0.232533944750408,0.536546802799238,0.233530684734339,0.493679549740441,0.164167464079095,0.0810688095458557,0.292399974850665,0.658650345873152,0.268412837520744,0.630869845692382,0,0,0.264450566663544,0,0,0.257734922644187,0,0,0.190225626112559,0,0.164698954724011,0,0.397912944082302,0,0.898819408654221,0,0,0,0.342745537829186,1.1270773567308,0,0.387904974335251,0.49095073923223,0.189709611372772,0.147610147979602,0,0.123397163921801,5.92905254174298,0,0.196558995113203,0.449724224769707,1.62288097110802,3.13530307678142,3.05551022137704,4.89083433666378,5.99900339067631,7.96228098245436,8.62609239164127,12.2806512730606,14.0416952901552,17.9331003342449,10.225652570749,13.0259750768109,0,0,0.162964976442026,0.509235257325564,0.469380496577004,0.167506257441816,0,0,0.315270288212382,0,0,0.327726629431476,0,0.144649058581512,0,0,0,0,0.642202359951168,0.117211686592203,0,1.00988370881749,1.57754109708128,1.17131623288992,0.430846795465598,0.238968797952552,0.222798674082394,0.283076530788832,0,0.292255857911312,2.37172666767914,0,1.70328102249922,1.06839362200353,0.977321756121456,0.494910368917606,1.32745138339963,0,0.604647113929502,0.188605079755898,0.590603785761546,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0.164549020602121,0.608929898229199,0.469343416127421,0.21183207086382,0.220528398054962,0,0.968786560175433,0.241251699712623,0.119372344003136,0,0,0.370850604021019,0,0.412773735926445,0,0,0,0,0.169978429993855,0.279902904647316,0.138199973804424,0,0,0.203319467126849,0.648032044930808,0,0.655087691238533,0.269728692769641,1.23980183588004,0,0,0,1.12738587736838,0.747582730219894,0.827292452285488,0.388902376688095,0.904118764344118,0.675824501963113,1.5256441023948,2.21347454234715,5.7672639434141,3.8653459332161,2.88030006257865,0,0,0,0,0,0.39736270956253,0,0,0.100966449948148,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0,0.226730383615211,0.221985953374065,0,0.167884616364078,0,0.750729901804728,0.915758121336325,0.643105137237198,0,1.12950368523413,0,0.572895513439397,0.515559547031063,5.48066015816514,2.2661816921691,2.02506750069542,4.5032120322422,2.71885445390523,1.55328093525546,0,0,0.170733605754134,1.45864030240976,0.419226325255965,1.10306105070008,2.00022055021454,2.26638562962784,0.320919209591815,1.76888048234658,2.02783439912192,1.32038438970253,1.87283014939765,1.47257850531199,0.746661096422973,1.42888107384922,1.62238056322798,0.578727661391115,1.23625770240992,0.883193520806384,0.685738504770831,1.59728225543404,0.953744759789284,0.726732083161643,1.50575008664529,1.77690676572521,1.64635175585495,1.31534855718921,1.22223702461276,0.561142271657738,0.949080144993393,0.788035859004508,1.63692417267876,0.929621047115796,1.73615949883027,1.24905288968973,1.87145286756327,2.57845264857958,2.48674831689496,1.54413993383661,1.39120701372253 | ||
|short_description=p4@Rnf144b | |||
}} | }} |
Latest revision as of 16:19, 1 October 2015
Short description: | p4@Rnf144b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Rnf144b_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 0bp_to_ENSMUST00000068891, NM_146042, uc007qhx.2_5end |
EntrezGene: | Rnf144b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
liver | 3.32e-15 | 22 |
epithelial sac | 3.32e-15 | 22 |
digestive gland | 3.32e-15 | 22 |
epithelium of foregut-midgut junction | 3.32e-15 | 22 |
anatomical boundary | 3.32e-15 | 22 |
hepatobiliary system | 3.32e-15 | 22 |
foregut-midgut junction | 3.32e-15 | 22 |
hepatic diverticulum | 3.32e-15 | 22 |
liver primordium | 3.32e-15 | 22 |
septum transversum | 3.32e-15 | 22 |
liver bud | 3.32e-15 | 22 |
digestive tract diverticulum | 2.58e-14 | 23 |
sac | 2.58e-14 | 23 |
exocrine gland | 9.38e-13 | 25 |
exocrine system | 9.38e-13 | 25 |