FFCP PHASE1:Hg19::chr3:145879113..145879126,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=5352 | |EntrezGene=5352 | ||
Line 8: | Line 8: | ||
|UniProt=O00469 | |UniProt=O00469 | ||
|association_with_transcript=155bp_to_NM_000935,NM_182943,uc003evr.1,uc003evs.1_5end | |association_with_transcript=155bp_to_NM_000935,NM_182943,uc003evr.1,uc003evs.1_5end | ||
|cluster_id=chr3:145879113..145879126,- | |||
|coexpression_cluster_id=C1512 | |coexpression_cluster_id=C1512 | ||
|description=CAGE_peak_2_at_PLOD2_5end | |description=CAGE_peak_2_at_PLOD2_5end |
Latest revision as of 06:23, 25 September 2015
Short description: | p2@PLOD2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PLOD2_5end |
Coexpression cluster: | C1512_Smooth_hepatic_mesenchymal_Mallassezderived_Small_Gingival_Ewing |
Association with transcript: | 155bp_to_NM_000935, NM_182943, uc003evr.1, uc003evs.1_5end |
EntrezGene: | PLOD2 |
HGNC: | 9082 |
UniProt: | O00469 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@PLOD2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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mesodermal cell | 1.68e-18 | 121 |
vascular associated smooth muscle cell | 2.35e-17 | 32 |
embryonic cell | 1.47e-15 | 250 |
muscle precursor cell | 1.43e-14 | 58 |
myoblast | 1.43e-14 | 58 |
multi-potent skeletal muscle stem cell | 1.43e-14 | 58 |
muscle cell | 3.39e-13 | 55 |
smooth muscle cell | 6.40e-13 | 43 |
smooth muscle myoblast | 6.40e-13 | 43 |
electrically responsive cell | 3.25e-11 | 61 |
Showing 1 to 10 of 13 entries
Ontology term | p-value | n |
---|---|---|
splanchnic layer of lateral plate mesoderm | 9.57e-22 | 83 |
vasculature | 4.33e-21 | 78 |
vascular system | 4.33e-21 | 78 |
epithelial tube open at both ends | 7.05e-21 | 59 |
blood vessel | 7.05e-21 | 59 |
blood vasculature | 7.05e-21 | 59 |
vascular cord | 7.05e-21 | 59 |
vessel | 9.83e-21 | 68 |
artery | 1.61e-20 | 42 |
arterial blood vessel | 1.61e-20 | 42 |
Showing 1 to 10 of 57 entries