CL:0000094: Difference between revisions
From FANTOM5_SSTAR
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|located_in= | |located_in= | ||
|name=granulocyte | |name=granulocyte | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of= | |part_of= | ||
Latest revision as of 16:29, 12 September 2014
| Name: | granulocyte | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "A leukocyte with abundant granules in the cytoplasm." [GOC:amm, GOC:tfm, MESH:A.11.118.637.415] | ||
| Xrefs: |
| ||
| Synonyms: |
"granular leucocyte" EXACT [] "granular leukocyte" EXACT [] "polymorphonuclear leukocyte" EXACT [] |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000081(blood cell),CL:0000766(myeloid leukocyte) |
|---|
Children
| is a: | FF:0000214 (CD15-positive granulocyte),CL:0000767 (basophil),CL:0000771 (eosinophil),CL:0000775 (neutrophil) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11233-116C9 (Neutrophils, donor1)
- 11314-117C9 (Neutrophils, donor2)
- 11390-118C4 (Neutrophils, donor3)
- 11542-120B3
- 11546-120B7
- 11622-122B2
- 11626-122B6
- 11703-123B2
- 11707-123B6
- 12133-128D9 (neutrophil PMN, donor1)
... further results Mouse (Mus musculus)
- 11233-116C9 (Neutrophils, donor1)
- 11314-117C9 (Neutrophils, donor2)
- 11390-118C4 (Neutrophils, donor3)
- 11542-120B3
- 11546-120B7
- 11622-122B2
- 11626-122B6
- 11703-123B2
- 11707-123B6
- 12133-128D9 (neutrophil PMN, donor1)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000094 (granulocyte), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 8.98e-147 | FFCP PHASE2:Hg19::chr10:73530674..73530683,-#_35f68e732b63df04fbaac01a88d634c0 | p@chr10:73530674..73530683, - |
| 8.98e-147 | FFCP PHASE2:Hg19::chr12:3827524..3827527,+#_35f68e732b63df04fbaac01a88d634c0 | p@chr12:3827524..3827527, + |
| 8.98e-147 | FFCP PHASE1:Hg19::chr12:3827524..3827527,+#_35f68e732b63df04fbaac01a88d634c0 | p@chr12:3827524..3827527, + |
| 8.98e-147 | FFCP PHASE1:Hg19::chr10:73530674..73530683,-#_35f68e732b63df04fbaac01a88d634c0 | p@chr10:73530674..73530683, - |
| 1.36e-133 | FFCP PHASE1:Hg19::chr11:67055888..67055896,-#_92c8ec9850562704f66ee524730cc281 | p@chr11:67055888..67055896, - |
| 1.36e-133 | FFCP PHASE2:Hg19::chr11:67055888..67055896,-#_92c8ec9850562704f66ee524730cc281 | p@chr11:67055888..67055896, - |
| 1.5e-122 | FFCP PHASE1:Hg19::chr2:70246139..70246146,-#_494594e457aa50e4942936a77e67bb94 | p@chr2:70246139..70246146, - |
| 1.5e-122 | FFCP PHASE2:Hg19::chr2:70246139..70246146,-#_494594e457aa50e4942936a77e67bb94 | p@chr2:70246139..70246146, - |
| 1.5e-122 | FFCP PHASE2:Hg19::chr1:208712347..208712354,+#_494594e457aa50e4942936a77e67bb94 | p@chr1:208712347..208712354, + |
| 1.5e-122 | FFCP PHASE2:Hg19::chr12:8720206..8720211,-#_494594e457aa50e4942936a77e67bb94 | p4@ENST00000542819 |
| 1.5e-122 | FFCP PHASE1:Hg19::chr1:182367189..182367199,+#_494594e457aa50e4942936a77e67bb94 | p@chr1:182367189..182367199, + |
| 1.5e-122 | FFCP PHASE1:Hg19::chr7:128048285..128048310,-#_494594e457aa50e4942936a77e67bb94 | p@chr7:128048285..128048310, - |
| 1.5e-122 | FFCP PHASE1:Hg19::chr2:103106370..103106380,+#_494594e457aa50e4942936a77e67bb94 | p@chr2:103106370..103106380, + |
| 1.5e-122 | FFCP PHASE1:Hg19::chr2:120967895..120967903,-#_494594e457aa50e4942936a77e67bb94 | p@chr2:120967895..120967903, - |
| 1.5e-122 | FFCP PHASE1:Hg19::chr2:120967889..120967892,-#_494594e457aa50e4942936a77e67bb94 | p@chr2:120967889..120967892, - |
| 1.5e-122 | FFCP PHASE1:Hg19::chr7:112062470..112062479,+#_494594e457aa50e4942936a77e67bb94 | p@chr7:112062470..112062479, + |
| 1.5e-122 | FFCP PHASE2:Hg19::chr2:103106370..103106380,+#_494594e457aa50e4942936a77e67bb94 | p@chr2:103106370..103106380, + |
| 1.5e-122 | FFCP PHASE1:Hg19::chr12:8720206..8720211,-#_494594e457aa50e4942936a77e67bb94 | p4@ENST00000542819 |
| 1.5e-122 | FFCP PHASE1:Hg19::chr8:133774199..133774210,-#_494594e457aa50e4942936a77e67bb94 | p@chr8:133774199..133774210, - |
| 1.5e-122 | FFCP PHASE2:Hg19::chr7:112062470..112062479,+#_494594e457aa50e4942936a77e67bb94 | p@chr7:112062470..112062479, + |
| 1.5e-122 | FFCP PHASE2:Hg19::chr8:133774199..133774210,-#_494594e457aa50e4942936a77e67bb94 | p@chr8:133774199..133774210, - |
| 1.5e-122 | FFCP PHASE2:Hg19::chr7:128048285..128048310,-#_494594e457aa50e4942936a77e67bb94 | p@chr7:128048285..128048310, - |
| 1.5e-122 | FFCP PHASE2:Hg19::chr11:1865720..1865724,+#_494594e457aa50e4942936a77e67bb94 | p@chr11:1865720..1865724, + |
| 1.5e-122 | FFCP PHASE1:Hg19::chr1:27155357..27155367,+#_494594e457aa50e4942936a77e67bb94 | p@chr1:27155357..27155367, + |
| 1.5e-122 | FFCP PHASE1:Hg19::chr15:90579320..90579331,-#_494594e457aa50e4942936a77e67bb94 | p@chr15:90579320..90579331, - |
| 1.5e-122 | FFCP PHASE2:Hg19::chr15:90579320..90579331,-#_494594e457aa50e4942936a77e67bb94 | p@chr15:90579320..90579331, - |
| 1.5e-122 | FFCP PHASE2:Hg19::chr1:27155357..27155367,+#_494594e457aa50e4942936a77e67bb94 | p@chr1:27155357..27155367, + |
| 1.5e-122 | FFCP PHASE1:Hg19::chr1:206731759..206731770,+#_494594e457aa50e4942936a77e67bb94 | p@chr1:206731759..206731770, + |
| 1.5e-122 | FFCP PHASE2:Hg19::chr1:206731759..206731770,+#_494594e457aa50e4942936a77e67bb94 | p@chr1:206731759..206731770, + |
| 1.5e-122 | FFCP PHASE2:Hg19::chr2:120967889..120967892,-#_494594e457aa50e4942936a77e67bb94 | p@chr2:120967889..120967892, - |
| 1.5e-122 | FFCP PHASE2:Hg19::chr17:80187468..80187472,+#_494594e457aa50e4942936a77e67bb94 | p@chr17:80187468..80187472, + |
| 1.5e-122 | FFCP PHASE1:Hg19::chr1:208712347..208712354,+#_494594e457aa50e4942936a77e67bb94 | p@chr1:208712347..208712354, + |
| 1.5e-122 | FFCP PHASE2:Hg19::chr14:88469399..88469404,-#_494594e457aa50e4942936a77e67bb94 | p@chr14:88469399..88469404, - |
| 1.5e-122 | FFCP PHASE1:Hg19::chr17:80187468..80187472,+#_494594e457aa50e4942936a77e67bb94 | p@chr17:80187468..80187472, + |
| 1.5e-122 | FFCP PHASE1:Hg19::chr14:88469399..88469404,-#_494594e457aa50e4942936a77e67bb94 | p@chr14:88469399..88469404, - |
| 1.5e-122 | FFCP PHASE2:Hg19::chr2:120967895..120967903,-#_494594e457aa50e4942936a77e67bb94 | p@chr2:120967895..120967903, - |
| 1.5e-122 | FFCP PHASE1:Hg19::chr11:1865720..1865724,+#_494594e457aa50e4942936a77e67bb94 | p@chr11:1865720..1865724, + |
| 1.5e-122 | FFCP PHASE2:Hg19::chr1:182367189..182367199,+#_494594e457aa50e4942936a77e67bb94 | p@chr1:182367189..182367199, + |
| 2.1e-120 | FFCP PHASE1:Hg19::chr3:12689370..12689373,+#_2278f238825a3fd8e6e59f982bf8ec7a | p@chr3:12689370..12689373, + |
| 2.1e-120 | FFCP PHASE2:Hg19::chr3:12689370..12689373,+#_2278f238825a3fd8e6e59f982bf8ec7a | p@chr3:12689370..12689373, + |
| 3.57e-120 | FFCP PHASE1:Hg19::chrX:22015219..22015221,+#_ca294ad645e53555e4bf5c6c67d2f8a1 | p@chrX:22015219..22015221, + |
| 3.57e-120 | FFCP PHASE2:Hg19::chrX:22015219..22015221,+#_ca294ad645e53555e4bf5c6c67d2f8a1 | p@chrX:22015219..22015221, + |
| 7.05e-113 | FFCP PHASE2:Hg19::chr3:72150292..72150301,+#_38fe549a13597a457d1e3fd0ed19c59f | p@chr3:72150292..72150301, + |
| 7.05e-113 | FFCP PHASE1:Hg19::chr3:72150292..72150301,+#_38fe549a13597a457d1e3fd0ed19c59f | p@chr3:72150292..72150301, + |
| 1.26e-112 | FFCP PHASE2:Hg19::chr19:18613543..18613548,-#_656d29cd0c30396bcfaf80b10c6b8f2f | p@chr19:18613543..18613548, - |
| 1.26e-112 | FFCP PHASE1:Hg19::chr19:18613543..18613548,-#_656d29cd0c30396bcfaf80b10c6b8f2f | p@chr19:18613543..18613548, - |
| 5.34e-112 | FFCP PHASE1:Hg19::chr3:128946643..128946657,-#_3771b435811b4e1499cc73a96b9c4165 | p@chr3:128946643..128946657, - |
| 5.34e-112 | FFCP PHASE2:Hg19::chr3:128946643..128946657,-#_3771b435811b4e1499cc73a96b9c4165 | p@chr3:128946643..128946657, - |
| 9.87e-111 | FFCP PHASE2:Hg19::chr1:182367155..182367159,+#_ec7c24fc2c6d7e70ad881f2d36003e8f | p@chr1:182367155..182367159, + |
| 9.87e-111 | FFCP PHASE1:Hg19::chr1:182367155..182367159,+#_ec7c24fc2c6d7e70ad881f2d36003e8f | p@chr1:182367155..182367159, + |
| 3.07e-110 | FFCP PHASE1:Hg19::chr2:136971902..136971905,-#_f92cc306a2fa002cc8aee46a34258b8f | p@chr2:136971902..136971905, - |
| 3.07e-110 | FFCP PHASE2:Hg19::chr2:136971902..136971905,-#_f92cc306a2fa002cc8aee46a34258b8f | p@chr2:136971902..136971905, - |
| 6.86e-110 | FFCP PHASE1:Hg19::chr15:90574798..90574806,+#_51baa4f5a950f401ee23f146dd5ebd1f | p@chr15:90574798..90574806, + |
| 6.86e-110 | FFCP PHASE2:Hg19::chr15:90574798..90574806,+#_51baa4f5a950f401ee23f146dd5ebd1f | p@chr15:90574798..90574806, + |
| 1.67e-105 | FFCP PHASE1:Hg19::chr1:117057737..117057747,-#_10d2db52a38b844c17b56936818fec3b | p@chr1:117057737..117057747, - |
| 1.67e-105 | FFCP PHASE2:Hg19::chr1:117057737..117057747,-#_10d2db52a38b844c17b56936818fec3b | p@chr1:117057737..117057747, - |
| 1.77e-102 | FFCP PHASE2:Hg19::chr11:75482683..75482690,-#_3cbc8347b0c09536e1133bca241358f7 | p@chr11:75482683..75482690, - |
| 1.77e-102 | FFCP PHASE1:Hg19::chr15:69075220..69075232,-#_3cbc8347b0c09536e1133bca241358f7 | p@chr15:69075220..69075232, - |
| 1.77e-102 | FFCP PHASE2:Hg19::chr20:48963128..48963163,+#_3cbc8347b0c09536e1133bca241358f7 | p@chr20:48963128..48963163, + |
| 1.77e-102 | FFCP PHASE2:Hg19::chr2:70274580..70274587,-#_3cbc8347b0c09536e1133bca241358f7 | p@chr2:70274580..70274587, - |
| 1.77e-102 | FFCP PHASE1:Hg19::chr15:80189589..80189598,+#_3cbc8347b0c09536e1133bca241358f7 | p@chr15:80189589..80189598, + |
| 1.77e-102 | FFCP PHASE2:Hg19::chr21:42739014..42739023,+#_3cbc8347b0c09536e1133bca241358f7 | p@chr21:42739014..42739023, + |
| 1.77e-102 | FFCP PHASE1:Hg19::chr1:185389832..185389838,-#_3cbc8347b0c09536e1133bca241358f7 | p@chr1:185389832..185389838, - |
| 1.77e-102 | FFCP PHASE1:Hg19::chr20:4792540..4792567,+#_3cbc8347b0c09536e1133bca241358f7 | p@chr20:4792540..4792567, + |
| 1.77e-102 | FFCP PHASE2:Hg19::chr4:74702740..74702748,-#_3cbc8347b0c09536e1133bca241358f7 | p@chr4:74702740..74702748, - |
| 1.77e-102 | FFCP PHASE1:Hg19::chr2:70246087..70246098,-#_3cbc8347b0c09536e1133bca241358f7 | p@chr2:70246087..70246098, - |
| 1.77e-102 | FFCP PHASE2:Hg19::chr1:185389832..185389838,-#_3cbc8347b0c09536e1133bca241358f7 | p@chr1:185389832..185389838, - |
| 1.77e-102 | FFCP PHASE1:Hg19::chr4:74702740..74702748,-#_3cbc8347b0c09536e1133bca241358f7 | p@chr4:74702740..74702748, - |
| 1.77e-102 | FFCP PHASE1:Hg19::chr8:133774445..133774459,+#_3cbc8347b0c09536e1133bca241358f7 | p@chr8:133774445..133774459, + |
| 1.77e-102 | FFCP PHASE2:Hg19::chr15:69075220..69075232,-#_3cbc8347b0c09536e1133bca241358f7 | p@chr15:69075220..69075232, - |
| 1.77e-102 | FFCP PHASE2:Hg19::chr17:58247963..58247970,-#_3cbc8347b0c09536e1133bca241358f7 | p@chr17:58247963..58247970, - |
| 1.77e-102 | FFCP PHASE2:Hg19::chr1:198610136..198610143,+#_3cbc8347b0c09536e1133bca241358f7 | p@chr1:198610136..198610143, + |
| 1.77e-102 | FFCP PHASE1:Hg19::chr20:48963128..48963163,+#_3cbc8347b0c09536e1133bca241358f7 | p@chr20:48963128..48963163, + |
| 1.77e-102 | FFCP PHASE1:Hg19::chr1:198610136..198610143,+#_3cbc8347b0c09536e1133bca241358f7 | p@chr1:198610136..198610143, + |
| 1.77e-102 | FFCP PHASE1:Hg19::chr11:75484913..75484923,+#_3cbc8347b0c09536e1133bca241358f7 | p@chr11:75484913..75484923, + |
| 1.77e-102 | FFCP PHASE1:Hg19::chr17:58247963..58247970,-#_3cbc8347b0c09536e1133bca241358f7 | p@chr17:58247963..58247970, - |
| 1.77e-102 | FFCP PHASE2:Hg19::chr21:46334376..46334408,+#_3cbc8347b0c09536e1133bca241358f7 | p@chr21:46334376..46334408, + |
| 1.77e-102 | FFCP PHASE2:Hg19::chr1:159047469..159047474,+#_3cbc8347b0c09536e1133bca241358f7 | p@chr1:159047469..159047474, + |
| 1.77e-102 | FFCP PHASE1:Hg19::chr1:159047469..159047474,+#_3cbc8347b0c09536e1133bca241358f7 | p@chr1:159047469..159047474, + |
| 1.77e-102 | FFCP PHASE1:Hg19::chr2:70274580..70274587,-#_3cbc8347b0c09536e1133bca241358f7 | p@chr2:70274580..70274587, - |
| 1.77e-102 | FFCP PHASE2:Hg19::chr20:4792540..4792567,+#_3cbc8347b0c09536e1133bca241358f7 | p@chr20:4792540..4792567, + |
| 1.77e-102 | FFCP PHASE1:Hg19::chr21:35570914..35570921,+#_3cbc8347b0c09536e1133bca241358f7 | p@chr21:35570914..35570921, + |
| 1.77e-102 | FFCP PHASE1:Hg19::chr11:75482683..75482690,-#_3cbc8347b0c09536e1133bca241358f7 | p@chr11:75482683..75482690, - |
| 1.77e-102 | FFCP PHASE2:Hg19::chr8:133774445..133774459,+#_3cbc8347b0c09536e1133bca241358f7 | p@chr8:133774445..133774459, + |
| 1.77e-102 | FFCP PHASE1:Hg19::chr21:46334376..46334408,+#_3cbc8347b0c09536e1133bca241358f7 | p@chr21:46334376..46334408, + |
| 1.77e-102 | FFCP PHASE2:Hg19::chr21:35570914..35570921,+#_3cbc8347b0c09536e1133bca241358f7 | p@chr21:35570914..35570921, + |
| 1.77e-102 | FFCP PHASE1:Hg19::chr21:42739014..42739023,+#_3cbc8347b0c09536e1133bca241358f7 | p@chr21:42739014..42739023, + |
| 1.77e-102 | FFCP PHASE2:Hg19::chr11:75484913..75484923,+#_3cbc8347b0c09536e1133bca241358f7 | p@chr11:75484913..75484923, + |
| 1.77e-102 | FFCP PHASE2:Hg19::chr15:80189589..80189598,+#_3cbc8347b0c09536e1133bca241358f7 | p@chr15:80189589..80189598, + |
| 1.77e-102 | FFCP PHASE2:Hg19::chr2:70246087..70246098,-#_3cbc8347b0c09536e1133bca241358f7 | p@chr2:70246087..70246098, - |
| 2.19e-102 | FFCP PHASE1:Hg19::chr11:1865774..1865782,+#_f0484a24c3ed945f8d01afd4d2d2eef2 | p@chr11:1865774..1865782, + |
| 2.19e-102 | FFCP PHASE2:Hg19::chr11:1865774..1865782,+#_f0484a24c3ed945f8d01afd4d2d2eef2 | p@chr11:1865774..1865782, + |
| 2.19e-102 | FFCP PHASE2:Hg19::chr2:103039663..103039672,+#_f0484a24c3ed945f8d01afd4d2d2eef2 | p6@IL18RAP |
| 2.19e-102 | FFCP PHASE1:Hg19::chr2:103039663..103039672,+#_f0484a24c3ed945f8d01afd4d2d2eef2 | p6@IL18RAP |
| 1.5e-100 | FFCP PHASE2:Hg19::chr11:15601676..15601684,-#_1abd72802dd7a11cecf93fc53dc73736 | p@chr11:15601676..15601684, - |
| 1.5e-100 | FFCP PHASE1:Hg19::chr11:15601676..15601684,-#_1abd72802dd7a11cecf93fc53dc73736 | p@chr11:15601676..15601684, - |
| 4.2e-99 | FFCP PHASE1:Hg19::chr2:136971977..136971986,-#_d939fb6c3136a88e1c03abbea62062f8 | p@chr2:136971977..136971986, - |
| 4.2e-99 | FFCP PHASE2:Hg19::chr2:136971977..136971986,-#_d939fb6c3136a88e1c03abbea62062f8 | p@chr2:136971977..136971986, - |
| 1.03e-98 | FFCP PHASE2:Hg19::chr3:129546717..129546727,-#_463c34a6dcfd4d59effe77127658a578 | p29@TMCC1 |
| 1.03e-98 | FFCP PHASE1:Hg19::chr14:88468930..88468934,-#_463c34a6dcfd4d59effe77127658a578 | p@chr14:88468930..88468934, - |
