CL:0000575: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 13: | Line 13: | ||
|located_in= | |located_in= | ||
|name=corneal epithelial cell | |name=corneal epithelial cell | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0000964 | |part_of=UBERON:0000964 | ||
Latest revision as of 16:35, 12 September 2014
| Name: | corneal epithelial cell | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "An epithelial cell of the cornea." [GOC:tfm] | ||
| Xrefs: |
| ||
| Synonyms: | "epithelial cell of cornea" EXACT [FMA:70551] | ||
| Alt_id: | CL:1000431 |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000076(squamous epithelial cell),CL:0002159(general ecto-epithelial cell) |
|---|---|
| part_of: | UBERON:0000964(cornea) |
Children
| derives from: | FF:0000043 (human corneal epithelial cell sample) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11526-119I5 (Corneal Epithelial Cells, donor1)
- 11606-120I4 (Corneal Epithelial Cells, donor2)
- 11687-122I4 (Corneal Epithelial Cells, donor3)
Mouse (Mus musculus)
- 11526-119I5 (Corneal Epithelial Cells, donor1)
- 11606-120I4 (Corneal Epithelial Cells, donor2)
- 11687-122I4 (Corneal Epithelial Cells, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000575 (corneal epithelial cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.75e-130 | FFCP PHASE1:Hg19::chr17:39023189..39023197,-#_90bf3da6dacad70b4e649f6de228d926 | p2@KRT12 |
| 1.75e-130 | FFCP PHASE2:Hg19::chr17:39023189..39023197,-#_90bf3da6dacad70b4e649f6de228d926 | p2@KRT12 |
| 5.22e-79 | FFCP PHASE2:Hg19::chr12:53189894..53189905,-#_31da7e1eab806ba23a95e8e030629695 | p1@KRT3 |
| 5.22e-79 | FFCP PHASE1:Hg19::chr12:53189894..53189905,-#_31da7e1eab806ba23a95e8e030629695 | p1@KRT3 |
| 1.45e-66 | FFCP PHASE1:Hg19::chr22:30144620..30144638,-#_a8aaac293212445649188996bd0c3a4e | p7@ZMAT5 |
| 1.45e-66 | FFCP PHASE2:Hg19::chr22:30144620..30144638,-#_a8aaac293212445649188996bd0c3a4e | p7@ZMAT5 |
| 5.53e-66 | FFCP PHASE1:Hg19::chr8:124206334..124206344,+#_c7800194a2512c4b482572d2d64cb984 | p@chr8:124206334..124206344, + |
| 5.53e-66 | FFCP PHASE2:Hg19::chr8:124206334..124206344,+#_c7800194a2512c4b482572d2d64cb984 | p@chr8:124206334..124206344, + |
| 3.58e-57 | FFCP PHASE1:Hg19::chr7:1600419..1600429,-#_5f749558dbc014688ebb267b910ea4de | p11@TMEM184A |
| 3.58e-57 | FFCP PHASE2:Hg19::chr7:1600419..1600429,-#_5f749558dbc014688ebb267b910ea4de | p11@TMEM184A |
| 3.58e-57 | FFCP PHASE1:Hg19::chr1:19403546..19403571,-#_5f749558dbc014688ebb267b910ea4de | p@chr1:19403546..19403571, - |
| 3.58e-57 | FFCP PHASE2:Hg19::chr1:19403546..19403571,-#_5f749558dbc014688ebb267b910ea4de | p@chr1:19403546..19403571, - |
| 1.13e-56 | FFCP PHASE1:Hg19::chr20:43743762..43743770,-#_e184b8476153f343bd1e73373b73c578 | p3@WFDC5 |
| 1.13e-56 | FFCP PHASE1:Hg19::chr12:48164790..48164808,-#_e184b8476153f343bd1e73373b73c578 | p16@RAPGEF3 |
| 1.13e-56 | FFCP PHASE2:Hg19::chr12:48164790..48164808,-#_e184b8476153f343bd1e73373b73c578 | p16@RAPGEF3 |
| 1.13e-56 | FFCP PHASE2:Hg19::chr20:43743762..43743770,-#_e184b8476153f343bd1e73373b73c578 | p3@WFDC5 |
| 1.46e-50 | FFCP PHASE1:Hg19::chr6:35048829..35048844,+#_c4946595904361e7fcc408ac06827621 | p@chr6:35048829..35048844, + |
| 1.46e-50 | FFCP PHASE2:Hg19::chr6:35048829..35048844,+#_c4946595904361e7fcc408ac06827621 | p@chr6:35048829..35048844, + |
| 2.42e-50 | FFCP PHASE2:Hg19::chr11:67463189..67463193,-#_be4cbc302928fefb9d03265a2bcf8436 | p@chr11:67463189..67463193, - |
| 2.42e-50 | FFCP PHASE1:Hg19::chr11:67463189..67463193,-#_be4cbc302928fefb9d03265a2bcf8436 | p@chr11:67463189..67463193, - |
| 2.74e-50 | FFCP PHASE2:Hg19::chr16:3014251..3014254,+#_bf5bdfbd37690b5844031ef976abee5c | p3@KREMEN2 |
| 2.74e-50 | FFCP PHASE1:Hg19::chr16:3014251..3014254,+#_bf5bdfbd37690b5844031ef976abee5c | p3@KREMEN2 |
| 4.52e-50 | FFCP PHASE2:Hg19::chr16:56368957..56368963,+#_a0addc0f62790f25eb004b4f8f94a4e7 | p@chr16:56368957..56368963, + |
| 4.52e-50 | FFCP PHASE1:Hg19::chr16:56368957..56368963,+#_a0addc0f62790f25eb004b4f8f94a4e7 | p@chr16:56368957..56368963, + |
| 2.98e-44 | FFCP PHASE1:Hg19::chr12:46897588..46897603,+#_c51c0365e5e72184f582fd10efbff34e | p@chr12:46897588..46897603, + |
| 2.98e-44 | FFCP PHASE2:Hg19::chr12:46897588..46897603,+#_c51c0365e5e72184f582fd10efbff34e | p@chr12:46897588..46897603, + |
| 3.72e-44 | FFCP PHASE1:Hg19::chr13:20934450..20934456,+#_b0dfda0464362ea238cd8926978f8d96 | p@chr13:20934450..20934456, + |
| 3.72e-44 | FFCP PHASE2:Hg19::chr13:20934450..20934456,+#_b0dfda0464362ea238cd8926978f8d96 | p@chr13:20934450..20934456, + |
| 4.65e-44 | FFCP PHASE2:Hg19::chr19:51538096..51538109,-#_1a21d043fb99f99fc1955bbd18a065c9 | p5@KLK12 |
| 4.65e-44 | FFCP PHASE1:Hg19::chr19:51538096..51538109,-#_1a21d043fb99f99fc1955bbd18a065c9 | p5@KLK12 |
| 7.33e-41 | FFCP PHASE2:Hg19::chr10:5529595..5529606,-#_6c6f1c6f9cbd39a7c634f429d2c7702e | p@chr10:5529595..5529606, - |
| 7.33e-41 | FFCP PHASE1:Hg19::chr10:5529595..5529606,-#_6c6f1c6f9cbd39a7c634f429d2c7702e | p@chr10:5529595..5529606, - |
| 3.68e-40 | FFCP PHASE1:Hg19::chr2:131669803..131669810,+#_88cc01231820acd1e92e600b8f445f33 | p@chr2:131669803..131669810, + |
| 3.68e-40 | FFCP PHASE2:Hg19::chr2:131669803..131669810,+#_88cc01231820acd1e92e600b8f445f33 | p@chr2:131669803..131669810, + |
| 4.49e-40 | FFCP PHASE2:Hg19::chr9:127212697..127212708,+#_37c8c52d93c2c95078562376ec0e9432 | p@chr9:127212697..127212708, + |
| 4.49e-40 | FFCP PHASE1:Hg19::chr9:127212697..127212708,+#_37c8c52d93c2c95078562376ec0e9432 | p@chr9:127212697..127212708, + |
| 6.7e-40 | FFCP PHASE1:Hg19::chr19:1905001..1905006,+#_777fe8956505c9560a7665b018e5c4e3 | p11@SCAMP4 |
| 6.7e-40 | FFCP PHASE2:Hg19::chr19:1905001..1905006,+#_777fe8956505c9560a7665b018e5c4e3 | p11@SCAMP4 |
| 9.99e-40 | FFCP PHASE1:Hg19::chr15:72490099..72490109,-#_d628a1a50c29e0e9b474687ba35e2369 | p3@GRAMD2 |
| 9.99e-40 | FFCP PHASE1:Hg19::chr19:50709335..50709346,+#_d628a1a50c29e0e9b474687ba35e2369 | p@chr19:50709335..50709346, + |
| 9.99e-40 | FFCP PHASE2:Hg19::chr15:72490099..72490109,-#_d628a1a50c29e0e9b474687ba35e2369 | p3@GRAMD2 |
| 9.99e-40 | FFCP PHASE2:Hg19::chr19:50709335..50709346,+#_d628a1a50c29e0e9b474687ba35e2369 | p@chr19:50709335..50709346, + |
| 1.18e-36 | FFCP PHASE1:Hg19::chr19:44306567..44306574,-#_3a12264dfc71f7aac476a4e020b02874 | p7@LYPD5 |
| 1.18e-36 | FFCP PHASE2:Hg19::chr19:44306567..44306574,-#_3a12264dfc71f7aac476a4e020b02874 | p7@LYPD5 |
| 2.04e-36 | FFCP PHASE1:Hg19::chr2:28853455..28853476,+#_7878fd37c9ab8a2e9ec12d673fc91e58 | p@chr2:28853455..28853476, + |
| 2.04e-36 | FFCP PHASE2:Hg19::chr2:28853455..28853476,+#_7878fd37c9ab8a2e9ec12d673fc91e58 | p@chr2:28853455..28853476, + |
| 2.45e-36 | FFCP PHASE1:Hg19::chr19:51538121..51538134,-#_e61e5dfe009f83eddc45b388a6d7dfd9 | p4@KLK12 |
| 2.45e-36 | FFCP PHASE2:Hg19::chr19:51538121..51538134,-#_e61e5dfe009f83eddc45b388a6d7dfd9 | p4@KLK12 |
| 2.45e-36 | FFCP PHASE1:Hg19::chr20:42816206..42816211,-#_e61e5dfe009f83eddc45b388a6d7dfd9 | p8@JPH2 |
| 2.45e-36 | FFCP PHASE2:Hg19::chr20:42816206..42816211,-#_e61e5dfe009f83eddc45b388a6d7dfd9 | p8@JPH2 |
| 5.04e-34 | FFCP PHASE1:Hg19::chr3:124535316..124535340,+#_d007bdcb0307f034c0d0fce01314a135 | p@chr3:124535316..124535340, + |
| 5.04e-34 | FFCP PHASE2:Hg19::chr3:124535316..124535340,+#_d007bdcb0307f034c0d0fce01314a135 | p@chr3:124535316..124535340, + |
| 5.04e-34 | FFCP PHASE1:Hg19::chr5:59064162..59064173,-#_d007bdcb0307f034c0d0fce01314a135 | p72@PDE4D |
| 5.04e-34 | FFCP PHASE2:Hg19::chr5:59064162..59064173,-#_d007bdcb0307f034c0d0fce01314a135 | p72@PDE4D |
| 1.64e-33 | FFCP PHASE2:Hg19::chr11:119039069..119039081,+#_716f9126541edb5b2d67db3a45476441 | p9@NLRX1 |
| 1.64e-33 | FFCP PHASE1:Hg19::chr11:119039069..119039081,+#_716f9126541edb5b2d67db3a45476441 | p9@NLRX1 |
| 1.0e-31 | FFCP PHASE1:Hg19::chr12:48164812..48164829,-#_4049485dd66893b4a1ea85789d43dade | p14@RAPGEF3 |
| 1.0e-31 | FFCP PHASE2:Hg19::chr12:48164812..48164829,-#_4049485dd66893b4a1ea85789d43dade | p14@RAPGEF3 |
| 1.6e-31 | FFCP PHASE1:Hg19::chr2:131669791..131669801,+#_aad76f026133be270bfff9a7729ac214 | p@chr2:131669791..131669801, + |
| 1.6e-31 | FFCP PHASE2:Hg19::chr2:131669791..131669801,+#_aad76f026133be270bfff9a7729ac214 | p@chr2:131669791..131669801, + |
| 2.54e-31 | FFCP PHASE2:Hg19::chr17:39742822..39742850,+#_d214b896389af88a9ddd11193369b63e | p@chr17:39742822..39742850, + |
| 2.54e-31 | FFCP PHASE1:Hg19::chr17:39742822..39742850,+#_d214b896389af88a9ddd11193369b63e | p@chr17:39742822..39742850, + |
| 2.97e-31 | FFCP PHASE1:Hg19::chr1:3591362..3591369,-#_41a2e9d80109e6fd7057e1d79f95c38c | p@chr1:3591362..3591369, - |
| 2.97e-31 | FFCP PHASE2:Hg19::chr1:3591362..3591369,-#_41a2e9d80109e6fd7057e1d79f95c38c | p@chr1:3591362..3591369, - |
| 4.71e-31 | FFCP PHASE1:Hg19::chr21:38631055..38631068,-#_321e7c6308a108aa3519fb898ea8f2a7 | p@chr21:38631055..38631068, - |
| 4.71e-31 | FFCP PHASE2:Hg19::chr21:38631055..38631068,-#_321e7c6308a108aa3519fb898ea8f2a7 | p@chr21:38631055..38631068, - |
| 5.5e-31 | FFCP PHASE2:Hg19::chr12:57328113..57328161,-#_c33f9b12986239862fd0bd98acc3983c | p2@SDR9C7 |
| 5.5e-31 | FFCP PHASE1:Hg19::chr12:57328113..57328161,-#_c33f9b12986239862fd0bd98acc3983c | p2@SDR9C7 |
| 7.48e-31 | FFCP PHASE2:Hg19::chr17:26833250..26833262,+#_dfa83f0d095e4494b3b24b339f7c25b5 | p2@FOXN1 |
| 7.48e-31 | FFCP PHASE1:Hg19::chr17:26833250..26833262,+#_dfa83f0d095e4494b3b24b339f7c25b5 | p2@FOXN1 |
| 4.49e-30 | FFCP PHASE1:Hg19::chr1:26498321..26498327,-#_6ef71982b06e3132f19e71c4ca7a321f | p1@ENST00000448923 |
| 4.49e-30 | FFCP PHASE2:Hg19::chr1:26498321..26498327,-#_6ef71982b06e3132f19e71c4ca7a321f | p1@ENST00000448923 |
| 6.02e-30 | FFCP PHASE1:Hg19::chr17:39743195..39743199,-#_563c590a7bdc0c3a94fdc92c273e9222 | p8@KRT14 |
| 6.02e-30 | FFCP PHASE2:Hg19::chr17:39743195..39743199,-#_563c590a7bdc0c3a94fdc92c273e9222 | p8@KRT14 |
| 6.99e-29 | FFCP PHASE1:Hg19::chr19:35609361..35609378,+#_282bc2df1b20c968022f9525db48febd | p@chr19:35609361..35609378, + |
| 6.99e-29 | FFCP PHASE2:Hg19::chr19:35609361..35609378,+#_282bc2df1b20c968022f9525db48febd | p@chr19:35609361..35609378, + |
| 9.3e-29 | FFCP PHASE2:Hg19::chr10:88729123..88729131,-#_55201d3f1e2321c89f6f4e3a4feb1928 | p2@ENST00000418273 |
| 9.3e-29 | FFCP PHASE1:Hg19::chr10:88729123..88729131,-#_55201d3f1e2321c89f6f4e3a4feb1928 | p2@ENST00000418273 |
| 1.43e-28 | FFCP PHASE1:Hg19::chr5:147582412..147582423,+#_07d2a01f519f9d09411ede7182bfa0ee | p9@SPINK6 |
| 1.43e-28 | FFCP PHASE2:Hg19::chr5:147582412..147582423,+#_07d2a01f519f9d09411ede7182bfa0ee | p9@SPINK6 |
| 5.41e-28 | FFCP PHASE1:Hg19::chr7:2019948..2019961,-#_fb044fd7bddd3e48cd0927ef5ce7e128 | p@chr7:2019948..2019961, - |
| 5.41e-28 | FFCP PHASE2:Hg19::chr7:2019948..2019961,-#_fb044fd7bddd3e48cd0927ef5ce7e128 | p@chr7:2019948..2019961, - |
| 6.2e-28 | FFCP PHASE2:Hg19::chr1:209601525..209601530,+#_a9512845d98bd5d6b1e91989fe0d739e | p@chr1:209601525..209601530, + |
| 6.2e-28 | FFCP PHASE1:Hg19::chr1:209601525..209601530,+#_a9512845d98bd5d6b1e91989fe0d739e | p@chr1:209601525..209601530, + |
| 9.31e-28 | FFCP PHASE1:Hg19::chr12:52887237..52887248,-#_4c9d3691156c4377e524aea78edb6f91 | p12@KRT6A |
| 9.31e-28 | FFCP PHASE2:Hg19::chr12:52887237..52887248,-#_4c9d3691156c4377e524aea78edb6f91 | p12@KRT6A |
| 1.07e-27 | FFCP PHASE2:Hg19::chr7:157086249..157086269,-#_d7548db929426f965635135cf115f70b | p@chr7:157086249..157086269, - |
| 1.07e-27 | FFCP PHASE1:Hg19::chr7:157086249..157086269,-#_d7548db929426f965635135cf115f70b | p@chr7:157086249..157086269, - |
| 2.39e-27 | FFCP PHASE2:Hg19::chr5:167182003..167182007,-#_fdc8224e2685916204d43d974cd051d0 | p@chr5:167182003..167182007, - |
| 2.39e-27 | FFCP PHASE1:Hg19::chr5:167182003..167182007,-#_fdc8224e2685916204d43d974cd051d0 | p@chr5:167182003..167182007, - |
| 2.16e-26 | FFCP PHASE1:Hg19::chr19:18870833..18870850,+#_9f550958cb2dfc496d26e3d8c4b7d874 | p@chr19:18870833..18870850, + |
| 2.16e-26 | FFCP PHASE2:Hg19::chr19:18870833..18870850,+#_9f550958cb2dfc496d26e3d8c4b7d874 | p@chr19:18870833..18870850, + |
| 4.32e-26 | FFCP PHASE1:Hg19::chr1:153321274..153321283,-#_82f14e5de791a76ba67fc9629336f815 | p2@PGLYRP4 |
| 4.32e-26 | FFCP PHASE2:Hg19::chr1:153321274..153321283,-#_82f14e5de791a76ba67fc9629336f815 | p2@PGLYRP4 |
| 8.7e-26 | FFCP PHASE1:Hg19::chr4:160356236..160356245,+#_1cc6901845d0b888b4b3eb6206aee730 | p@chr4:160356236..160356245, + |
| 8.7e-26 | FFCP PHASE1:Hg19::chr1:153004879..153004890,+#_1cc6901845d0b888b4b3eb6206aee730 | p4@SPRR1B |
| 8.7e-26 | FFCP PHASE2:Hg19::chr4:160356236..160356245,+#_1cc6901845d0b888b4b3eb6206aee730 | p@chr4:160356236..160356245, + |
| 8.7e-26 | FFCP PHASE2:Hg19::chr1:153004879..153004890,+#_1cc6901845d0b888b4b3eb6206aee730 | p4@SPRR1B |
| 9.87e-26 | FFCP PHASE1:Hg19::chr17:48611940..48611947,+#_415ab76c3452b41a9fd5525d3686570c | p5@EPN3 |
| 9.87e-26 | FFCP PHASE2:Hg19::chr17:48611940..48611947,+#_415ab76c3452b41a9fd5525d3686570c | p5@EPN3 |
