CL:0001029: Difference between revisions
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|located_in= | |located_in= | ||
|name=common dendritic progenitor | |name=common dendritic progenitor | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of= | |part_of= | ||
Latest revision as of 16:39, 12 September 2014
| Name: | common dendritic progenitor |
|---|---|
| Namespace: | FANTOM |
| Definition: | "Common dendritic precursor is a hematopoietic progenitor cell that is CD117-low, CD135-positive, CD115-positive and lacks plasma membrane parts for hematopoietic lineage markers." [GO_REF:0000031, GOC:amm, GOC:tfm, PMID:16551251, PMID:17922016, PMID:19286519] |
| Synonyms: |
"CDP" EXACT [PMID:21219184] "common dendritic precursor" EXACT [] "pro-DCs" EXACT [PMID:21219184] |
| Comments: | Surface markers are for mouse cells. Originally described in the dendritic cell ontology (DC_CL:0000041) CDP are reportedly CD2-negative, CD3-negative, CD4-negative, CD5-negative, CD8a-negative, CD11c-positive, CD14-negative, CD19-negative, CD20-negative, CD56-negative, B220-negative, Ly6g-negative, MHCII-positive, and Ter119-negative. (PMID: 19243617). |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000763(myeloid cell),CL:0001019(CD115-positive monocyte OR common dendritic progenitor) |
|---|---|
| develops_from: | CL:0002009(macrophage dendritic cell progenitor) |
Children
| develops from: | CL:0000840 (immature conventional dendritic cell) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0001029 (common dendritic progenitor), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 2.64e-136 | FFCP PHASE2:Hg19::chr1:159272441..159272452,+#_63b95b3cf1d84604e92b44aa499c84bf | p5@FCER1A |
| 2.64e-136 | FFCP PHASE1:Hg19::chr1:159272441..159272452,+#_63b95b3cf1d84604e92b44aa499c84bf | p5@FCER1A |
| 3.49e-136 | FFCP PHASE2:Hg19::chr1:159272420..159272431,+#_cd5b0b4ec4ebe1261012f563787d6bc8 | p3@FCER1A |
| 3.49e-136 | FFCP PHASE1:Hg19::chr1:159272420..159272431,+#_cd5b0b4ec4ebe1261012f563787d6bc8 | p3@FCER1A |
| 4.61e-136 | FFCP PHASE2:Hg19::chr2:61080954..61080964,+#_e03ccfa6f237bb10cff002d1751d1ad1 | p@chr2:61080954..61080964, + |
| 4.61e-136 | FFCP PHASE1:Hg19::chr2:61080954..61080964,+#_e03ccfa6f237bb10cff002d1751d1ad1 | p@chr2:61080954..61080964, + |
| 1.07e-130 | FFCP PHASE1:Hg19::chr4:16267477..16267486,-#_51e723bc34caba2e0282841357efaf78 | p@chr4:16267477..16267486, - |
| 1.07e-130 | FFCP PHASE1:Hg19::chr17:6982145..6982156,-#_51e723bc34caba2e0282841357efaf78 | p1@CU691636 |
| 1.07e-130 | FFCP PHASE2:Hg19::chr17:6982145..6982156,-#_51e723bc34caba2e0282841357efaf78 | p1@CU691636 |
| 1.07e-130 | FFCP PHASE2:Hg19::chr4:16267477..16267486,-#_51e723bc34caba2e0282841357efaf78 | p@chr4:16267477..16267486, - |
| 3.08e-117 | FFCP PHASE1:Hg19::chr1:158224278..158224289,+#_7c7bcb607b8395c070b13630126f66e0 | p9@CD1A |
| 3.08e-117 | FFCP PHASE2:Hg19::chr1:158224278..158224289,+#_7c7bcb607b8395c070b13630126f66e0 | p9@CD1A |
| 6.33e-117 | FFCP PHASE2:Hg19::chr9:124030015..124030022,+#_9e50cfbd40690851d4b9c46fc05a1a23 | p43@GSN |
| 6.33e-117 | FFCP PHASE1:Hg19::chr9:124030015..124030022,+#_9e50cfbd40690851d4b9c46fc05a1a23 | p43@GSN |
| 6.76e-105 | FFCP PHASE2:Hg19::chr17:6983503..6983512,-#_4bbd4b744b64eb26dafa677f217b460f | p5@CLEC10A |
| 6.76e-105 | FFCP PHASE1:Hg19::chr17:6983503..6983512,-#_4bbd4b744b64eb26dafa677f217b460f | p5@CLEC10A |
| 1.51e-104 | FFCP PHASE1:Hg19::chr12:121976278..121976285,-#_f8d3e7d9b51122fe6c13fd047e8645a2 | p@chr12:121976278..121976285, - |
| 1.51e-104 | FFCP PHASE2:Hg19::chr12:121976278..121976285,-#_f8d3e7d9b51122fe6c13fd047e8645a2 | p@chr12:121976278..121976285, - |
| 6.22e-103 | FFCP PHASE2:Hg19::chr1:158224235..158224244,+#_e2263a727c2d005bf6bbdb74201811b6 | p10@CD1A |
| 6.22e-103 | FFCP PHASE1:Hg19::chr1:158224235..158224244,+#_e2263a727c2d005bf6bbdb74201811b6 | p10@CD1A |
| 9.47e-103 | FFCP PHASE1:Hg19::chr17:6983479..6983490,-#_2f42bb69bd0143506002d7e9cb2ed2c8 | p4@CLEC10A |
| 9.47e-103 | FFCP PHASE2:Hg19::chr17:6983479..6983490,-#_2f42bb69bd0143506002d7e9cb2ed2c8 | p4@CLEC10A |
| 4.11e-102 | FFCP PHASE1:Hg19::chr15:101535004..101535045,+#_72b61155d7d09c6c9411aab44bf0ad2a | p@chr15:101535004..101535045, + |
| 4.11e-102 | FFCP PHASE2:Hg19::chr15:101535004..101535045,+#_72b61155d7d09c6c9411aab44bf0ad2a | p@chr15:101535004..101535045, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr14:55590616..55590617,+#_3c785f50463d66eaf342c3585be24860 | p33@LGALS3 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr17:46058427..46058445,+#_3c785f50463d66eaf342c3585be24860 | p@chr17:46058427..46058445, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr5:52909608..52909635,+#_3c785f50463d66eaf342c3585be24860 | p@chr5:52909608..52909635, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr6:42145703..42145716,+#_3c785f50463d66eaf342c3585be24860 | p@chr6:42145703..42145716, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr19:10246051..10246052,+#_3c785f50463d66eaf342c3585be24860 | p@chr19:10246051..10246052, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr1:224398082..224398104,-#_3c785f50463d66eaf342c3585be24860 | p2@ENST00000453760 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr16:57399108..57399115,+#_3c785f50463d66eaf342c3585be24860 | p@chr16:57399108..57399115, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr9:131235697..131235702,+#_3c785f50463d66eaf342c3585be24860 | p@chr9:131235697..131235702, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr14:91019196..91019216,-#_3c785f50463d66eaf342c3585be24860 | p@chr14:91019196..91019216, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr11:7544941..7544949,+#_3c785f50463d66eaf342c3585be24860 | p@chr11:7544941..7544949, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr9:131235669..131235680,+#_3c785f50463d66eaf342c3585be24860 | p@chr9:131235669..131235680, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr10:127738495..127738498,-#_3c785f50463d66eaf342c3585be24860 | p@chr10:127738495..127738498, - |
| 1.83e-98 | FFCP PHASE2:Hg19::chr4:26887004..26887011,-#_3c785f50463d66eaf342c3585be24860 | p@chr4:26887004..26887011, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr16:5070595..5070602,-#_3c785f50463d66eaf342c3585be24860 | p@chr16:5070595..5070602, - |
| 1.83e-98 | FFCP PHASE2:Hg19::chr6:154521063..154521071,-#_3c785f50463d66eaf342c3585be24860 | p@chr6:154521063..154521071, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr17:67125354..67125365,-#_3c785f50463d66eaf342c3585be24860 | p@chr17:67125354..67125365, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr10:127738525..127738534,-#_3c785f50463d66eaf342c3585be24860 | p@chr10:127738525..127738534, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr12:1725865..1725884,+#_3c785f50463d66eaf342c3585be24860 | p7@WNT5B |
| 1.83e-98 | FFCP PHASE1:Hg19::chr10:46048740..46048751,-#_3c785f50463d66eaf342c3585be24860 | p@chr10:46048740..46048751, - |
| 1.83e-98 | FFCP PHASE2:Hg19::chr8:20258347..20258360,+#_3c785f50463d66eaf342c3585be24860 | p@chr8:20258347..20258360, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr15:45454976..45454985,+#_3c785f50463d66eaf342c3585be24860 | p@chr15:45454976..45454985, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr8:20258288..20258300,+#_3c785f50463d66eaf342c3585be24860 | p@chr8:20258288..20258300, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr3:152588255..152588266,+#_3c785f50463d66eaf342c3585be24860 | p@chr3:152588255..152588266, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr11:1870362..1870366,-#_3c785f50463d66eaf342c3585be24860 | p@chr11:1870362..1870366, - |
| 1.83e-98 | FFCP PHASE2:Hg19::chr17:67125354..67125365,-#_3c785f50463d66eaf342c3585be24860 | p@chr17:67125354..67125365, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr17:26961255..26961266,-#_3c785f50463d66eaf342c3585be24860 | p@chr17:26961255..26961266, - |
| 1.83e-98 | FFCP PHASE2:Hg19::chr8:17777952..17777982,-#_3c785f50463d66eaf342c3585be24860 | p@chr8:17777952..17777982, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr10:119014647..119014658,+#_3c785f50463d66eaf342c3585be24860 | p@chr10:119014647..119014658, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr19:17843005..17843009,+#_3c785f50463d66eaf342c3585be24860 | p@chr19:17843005..17843009, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr9:131235697..131235702,+#_3c785f50463d66eaf342c3585be24860 | p@chr9:131235697..131235702, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr17:26961255..26961266,-#_3c785f50463d66eaf342c3585be24860 | p@chr17:26961255..26961266, - |
| 1.83e-98 | FFCP PHASE2:Hg19::chr15:45454976..45454985,+#_3c785f50463d66eaf342c3585be24860 | p@chr15:45454976..45454985, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr4:26887004..26887011,-#_3c785f50463d66eaf342c3585be24860 | p@chr4:26887004..26887011, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr10:127738551..127738554,-#_3c785f50463d66eaf342c3585be24860 | p@chr10:127738551..127738554, - |
| 1.83e-98 | FFCP PHASE2:Hg19::chr4:91005462..91005483,+#_3c785f50463d66eaf342c3585be24860 | p@chr4:91005462..91005483, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr17:46058452..46058468,+#_3c785f50463d66eaf342c3585be24860 | p@chr17:46058452..46058468, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr2:218933972..218933980,+#_3c785f50463d66eaf342c3585be24860 | p1@RUFY4 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr11:7544914..7544928,+#_3c785f50463d66eaf342c3585be24860 | p@chr11:7544914..7544928, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr8:20258347..20258360,+#_3c785f50463d66eaf342c3585be24860 | p@chr8:20258347..20258360, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr4:169633317..169633344,+#_3c785f50463d66eaf342c3585be24860 | p43@PALLD |
| 1.83e-98 | FFCP PHASE1:Hg19::chr6:154521063..154521071,-#_3c785f50463d66eaf342c3585be24860 | p@chr6:154521063..154521071, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr17:8171916..8171922,+#_3c785f50463d66eaf342c3585be24860 | p4@PFAS |
| 1.83e-98 | FFCP PHASE2:Hg19::chr17:46058452..46058468,+#_3c785f50463d66eaf342c3585be24860 | p@chr17:46058452..46058468, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr11:1870376..1870388,-#_3c785f50463d66eaf342c3585be24860 | p@chr11:1870376..1870388, - |
| 1.83e-98 | FFCP PHASE2:Hg19::chr5:86707848..86707855,-#_3c785f50463d66eaf342c3585be24860 | p@chr5:86707848..86707855, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr17:6982162..6982170,-#_3c785f50463d66eaf342c3585be24860 | p2@CU691636 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr17:8171916..8171922,+#_3c785f50463d66eaf342c3585be24860 | p4@PFAS |
| 1.83e-98 | FFCP PHASE2:Hg19::chr20:15229663..15229673,+#_3c785f50463d66eaf342c3585be24860 | p@chr20:15229663..15229673, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr1:153744224..153744233,+#_3c785f50463d66eaf342c3585be24860 | p@chr1:153744224..153744233, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr17:26970937..26970956,-#_3c785f50463d66eaf342c3585be24860 | p2@KIAA0100 |
| 1.83e-98 | FFCP PHASE1:Hg19::chr10:119014661..119014665,+#_3c785f50463d66eaf342c3585be24860 | p@chr10:119014661..119014665, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr6:42145678..42145695,+#_3c785f50463d66eaf342c3585be24860 | p@chr6:42145678..42145695, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr12:1725865..1725884,+#_3c785f50463d66eaf342c3585be24860 | p7@WNT5B |
| 1.83e-98 | FFCP PHASE2:Hg19::chr10:46048740..46048751,-#_3c785f50463d66eaf342c3585be24860 | p@chr10:46048740..46048751, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr8:17777952..17777982,-#_3c785f50463d66eaf342c3585be24860 | p@chr8:17777952..17777982, - |
| 1.83e-98 | FFCP PHASE2:Hg19::chr17:6982162..6982170,-#_3c785f50463d66eaf342c3585be24860 | p2@CU691636 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr10:127738525..127738534,-#_3c785f50463d66eaf342c3585be24860 | p@chr10:127738525..127738534, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr19:17843005..17843009,+#_3c785f50463d66eaf342c3585be24860 | p@chr19:17843005..17843009, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr16:57399108..57399115,+#_3c785f50463d66eaf342c3585be24860 | p@chr16:57399108..57399115, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr6:32156759..32156767,+#_3c785f50463d66eaf342c3585be24860 | p@chr6:32156759..32156767, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr17:26970937..26970956,-#_3c785f50463d66eaf342c3585be24860 | p2@KIAA0100 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr11:1870362..1870366,-#_3c785f50463d66eaf342c3585be24860 | p@chr11:1870362..1870366, - |
| 1.83e-98 | FFCP PHASE2:Hg19::chr8:97906247..97906259,+#_3c785f50463d66eaf342c3585be24860 | p@chr8:97906247..97906259, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr2:218954217..218954224,+#_3c785f50463d66eaf342c3585be24860 | p@chr2:218954217..218954224, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr11:7544941..7544949,+#_3c785f50463d66eaf342c3585be24860 | p@chr11:7544941..7544949, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr4:91005462..91005483,+#_3c785f50463d66eaf342c3585be24860 | p@chr4:91005462..91005483, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr2:218933972..218933980,+#_3c785f50463d66eaf342c3585be24860 | p1@RUFY4 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr16:5070595..5070602,-#_3c785f50463d66eaf342c3585be24860 | p@chr16:5070595..5070602, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr4:169633317..169633344,+#_3c785f50463d66eaf342c3585be24860 | p43@PALLD |
| 1.83e-98 | FFCP PHASE1:Hg19::chr8:97906247..97906259,+#_3c785f50463d66eaf342c3585be24860 | p@chr8:97906247..97906259, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr4:78105380..78105389,+#_3c785f50463d66eaf342c3585be24860 | p@chr4:78105380..78105389, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr10:119014647..119014658,+#_3c785f50463d66eaf342c3585be24860 | p@chr10:119014647..119014658, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr20:15229663..15229673,+#_3c785f50463d66eaf342c3585be24860 | p@chr20:15229663..15229673, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr17:26970962..26970974,-#_3c785f50463d66eaf342c3585be24860 | p5@KIAA0100 |
| 1.83e-98 | FFCP PHASE1:Hg19::chr10:127738495..127738498,-#_3c785f50463d66eaf342c3585be24860 | p@chr10:127738495..127738498, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr5:86707848..86707855,-#_3c785f50463d66eaf342c3585be24860 | p@chr5:86707848..86707855, - |
