CL:0002621: Difference between revisions
From FANTOM5_SSTAR
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|located_in= | |located_in= | ||
|name=gingival epithelial cell | |name=gingival epithelial cell | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date=2011-03-14T12:46:28Z | |obo_creation_date=2011-03-14T12:46:28Z | ||
|part_of=UBERON:0001949 | |part_of=UBERON:0001949 | ||
Latest revision as of 16:46, 12 September 2014
| Name: | gingival epithelial cell |
|---|---|
| Namespace: | FANTOM |
| Created by: | tmeehan |
| Creation date: | 2011-03-14T12:46:28Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0002251(epithelial cell of alimentary canal) |
|---|---|
| part_of: | UBERON:0001949(gingival epithelium) |
Children
| derives from: | FF:0000254 (human gingival epithelial cell sample) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11221-116B6 (Gingival epithelial cells, donor1 (GEA11))
- 11302-117B6 (Gingival epithelial cells, donor2 (GEA14))
- 11379-118B2 (Gingival epithelial cells, donor3 (GEA15))
Mouse (Mus musculus)
- 11221-116B6 (Gingival epithelial cells, donor1 (GEA11))
- 11302-117B6 (Gingival epithelial cells, donor2 (GEA14))
- 11379-118B2 (Gingival epithelial cells, donor3 (GEA15))
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002621 (gingival epithelial cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 4.06e-99 | FFCP PHASE1:Hg19::chr4:143470541..143470551,+#_243f5f632b5af509e73b9681d3127061 | p@chr4:143470541..143470551, + |
| 4.06e-99 | FFCP PHASE2:Hg19::chr4:143470541..143470551,+#_243f5f632b5af509e73b9681d3127061 | p@chr4:143470541..143470551, + |
| 1.52e-87 | FFCP PHASE1:Hg19::chr1:14465017..14465026,+#_56317ecb69cd14afe66a6204d776e310 | p@chr1:14465017..14465026, + |
| 1.52e-87 | FFCP PHASE2:Hg19::chr17:73753856..73753871,+#_56317ecb69cd14afe66a6204d776e310 | p1@CU674593 |
| 1.52e-87 | FFCP PHASE1:Hg19::chr17:73753856..73753871,+#_56317ecb69cd14afe66a6204d776e310 | p1@CU674593 |
| 1.52e-87 | FFCP PHASE2:Hg19::chr1:14465017..14465026,+#_56317ecb69cd14afe66a6204d776e310 | p@chr1:14465017..14465026, + |
| 2.28e-85 | FFCP PHASE2:Hg19::chr8:130798890..130798901,-#_387427adfddfbb754ff68c43a30d2a1f | p3@GSDMC |
| 2.28e-85 | FFCP PHASE1:Hg19::chr8:130798890..130798901,-#_387427adfddfbb754ff68c43a30d2a1f | p3@GSDMC |
| 5.41e-85 | FFCP PHASE2:Hg19::chr11:93754560..93754567,+#_3f35649b32fb5da4d843aaed22939881 | p@chr11:93754560..93754567, + |
| 5.41e-85 | FFCP PHASE1:Hg19::chr11:93754560..93754567,+#_3f35649b32fb5da4d843aaed22939881 | p@chr11:93754560..93754567, + |
| 2.27e-84 | FFCP PHASE2:Hg19::chr10:105791095..105791110,-#_414e901e84096c5c625b19afc07799db | p@chr10:105791095..105791110, - |
| 2.27e-84 | FFCP PHASE1:Hg19::chr10:105791095..105791110,-#_414e901e84096c5c625b19afc07799db | p@chr10:105791095..105791110, - |
| 1.01e-74 | FFCP PHASE2:Hg19::chr1:153533849..153533860,-#_aa577964d4bcdcfcda24cca362212834 | p@chr1:153533849..153533860, - |
| 1.01e-74 | FFCP PHASE2:Hg19::chr7:40883542..40883550,+#_aa577964d4bcdcfcda24cca362212834 | p@chr7:40883542..40883550, + |
| 1.01e-74 | FFCP PHASE1:Hg19::chr1:153533849..153533860,-#_aa577964d4bcdcfcda24cca362212834 | p@chr1:153533849..153533860, - |
| 1.01e-74 | FFCP PHASE1:Hg19::chr7:40883542..40883550,+#_aa577964d4bcdcfcda24cca362212834 | p@chr7:40883542..40883550, + |
| 2.14e-74 | FFCP PHASE2:Hg19::chr3:190252374..190252383,-#_78f36e27165d7edb75453947d66cdbd4 | p@chr3:190252374..190252383, - |
| 2.14e-74 | FFCP PHASE1:Hg19::chr3:190252374..190252383,-#_78f36e27165d7edb75453947d66cdbd4 | p@chr3:190252374..190252383, - |
| 4.55e-74 | FFCP PHASE1:Hg19::chr21:44957893..44957903,-#_01339562b3f8f4e9b1a4f1c10c7ca8ed | p@chr21:44957893..44957903, - |
| 4.55e-74 | FFCP PHASE2:Hg19::chr21:44957893..44957903,-#_01339562b3f8f4e9b1a4f1c10c7ca8ed | p@chr21:44957893..44957903, - |
| 9.64e-74 | FFCP PHASE2:Hg19::chr10:106205489..106205498,+#_712cb62557b4fa6dd8df5e52ca083d34 | p@chr10:106205489..106205498, + |
| 9.64e-74 | FFCP PHASE1:Hg19::chr10:106205489..106205498,+#_712cb62557b4fa6dd8df5e52ca083d34 | p@chr10:106205489..106205498, + |
| 3.35e-66 | FFCP PHASE1:Hg19::chr15:40531729..40531738,+#_e3c05fb1eda25f87a8b9c4933cc02091 | p15@PAK6 |
| 3.35e-66 | FFCP PHASE2:Hg19::chr15:40531729..40531738,+#_e3c05fb1eda25f87a8b9c4933cc02091 | p15@PAK6 |
| 4.71e-66 | FFCP PHASE2:Hg19::chr16:82671490..82671521,+#_a6519b1c567baf51a23fb755f50b8cc0 | p@chr16:82671490..82671521, + |
| 4.71e-66 | FFCP PHASE1:Hg19::chr16:82671490..82671521,+#_a6519b1c567baf51a23fb755f50b8cc0 | p@chr16:82671490..82671521, + |
| 6.53e-66 | FFCP PHASE2:Hg19::chr9:108870138..108870152,+#_7827cc2fa9ac5ee375fd0678bd768d6a | p1@uc004bcw.2 |
| 6.53e-66 | FFCP PHASE1:Hg19::chr9:108870138..108870152,+#_7827cc2fa9ac5ee375fd0678bd768d6a | p1@uc004bcw.2 |
| 1.22e-59 | FFCP PHASE2:Hg19::chr11:13030878..13030889,+#_3fd18694aa30bc14f1cab6550e7634b5 | p2@RASSF10 |
| 1.22e-59 | FFCP PHASE1:Hg19::chr11:13030878..13030889,+#_3fd18694aa30bc14f1cab6550e7634b5 | p2@RASSF10 |
| 1.83e-59 | FFCP PHASE2:Hg19::chr18:20493879..20493891,+#_da0504bd102e73ccdefdc9eb6fdf9e69 | p@chr18:20493879..20493891, + |
| 1.83e-59 | FFCP PHASE1:Hg19::chr18:20493879..20493891,+#_da0504bd102e73ccdefdc9eb6fdf9e69 | p@chr18:20493879..20493891, + |
| 2.73e-59 | FFCP PHASE2:Hg19::chr8:124850358..124850380,+#_ce18cdd2e6cd732b19802eecdb03f44d | p@chr8:124850358..124850380, + |
| 2.73e-59 | FFCP PHASE1:Hg19::chr8:124850358..124850380,+#_ce18cdd2e6cd732b19802eecdb03f44d | p@chr8:124850358..124850380, + |
| 8.69e-55 | FFCP PHASE2:Hg19::chr13:30259768..30259777,+#_30f155dc9a986e7638c87e06da812793 | p@chr13:30259768..30259777, + |
| 8.69e-55 | FFCP PHASE1:Hg19::chr13:30259768..30259777,+#_30f155dc9a986e7638c87e06da812793 | p@chr13:30259768..30259777, + |
| 1.81e-54 | FFCP PHASE2:Hg19::chr5:167247119..167247129,+#_9d4948b420b30d21e5d73791be5b8924 | p@chr5:167247119..167247129, + |
| 1.81e-54 | FFCP PHASE1:Hg19::chr5:167247119..167247129,+#_9d4948b420b30d21e5d73791be5b8924 | p@chr5:167247119..167247129, + |
| 2.17e-54 | FFCP PHASE1:Hg19::chr13:75017232..75017235,+#_8d0a02eb673a8be5fa0bcfbb4c4838dc | p@chr13:75017232..75017235, + |
| 2.17e-54 | FFCP PHASE2:Hg19::chr13:75017232..75017235,+#_8d0a02eb673a8be5fa0bcfbb4c4838dc | p@chr13:75017232..75017235, + |
| 2.17e-54 | FFCP PHASE2:Hg19::chr5:52619638..52619641,+#_8d0a02eb673a8be5fa0bcfbb4c4838dc | p@chr5:52619638..52619641, + |
| 2.17e-54 | FFCP PHASE1:Hg19::chr5:52619638..52619641,+#_8d0a02eb673a8be5fa0bcfbb4c4838dc | p@chr5:52619638..52619641, + |
| 5.41e-54 | FFCP PHASE1:Hg19::chr11:129511955..129511961,-#_bb1466a75f401bc907bbd6b1cd75c096 | p@chr11:129511955..129511961, - |
| 5.41e-54 | FFCP PHASE2:Hg19::chr11:129511955..129511961,-#_bb1466a75f401bc907bbd6b1cd75c096 | p@chr11:129511955..129511961, - |
| 2.87e-53 | FFCP PHASE1:Hg19::chr3:52440350..52440361,-#_1da6ecb4a1f34496adc54365d2c63fcc | p@chr3:52440350..52440361, - |
| 2.87e-53 | FFCP PHASE2:Hg19::chr1:183213228..183213235,+#_1da6ecb4a1f34496adc54365d2c63fcc | p@chr1:183213228..183213235, + |
| 2.87e-53 | FFCP PHASE2:Hg19::chr3:52440350..52440361,-#_1da6ecb4a1f34496adc54365d2c63fcc | p@chr3:52440350..52440361, - |
| 2.87e-53 | FFCP PHASE1:Hg19::chr1:183213228..183213235,+#_1da6ecb4a1f34496adc54365d2c63fcc | p@chr1:183213228..183213235, + |
| 4.89e-53 | FFCP PHASE1:Hg19::chr8:130798565..130798567,-#_c57d936aa1cdbf3e686f23450276a8df | p4@GSDMC |
| 4.89e-53 | FFCP PHASE2:Hg19::chr10:5567644..5567657,+#_c57d936aa1cdbf3e686f23450276a8df | p@chr10:5567644..5567657, + |
| 4.89e-53 | FFCP PHASE1:Hg19::chr10:5567644..5567657,+#_c57d936aa1cdbf3e686f23450276a8df | p@chr10:5567644..5567657, + |
| 4.89e-53 | FFCP PHASE2:Hg19::chr8:130798565..130798567,-#_c57d936aa1cdbf3e686f23450276a8df | p4@GSDMC |
| 6.39e-53 | FFCP PHASE2:Hg19::chr17:73720330..73720338,+#_85343325dcb008c533e3b9fb09dc8002 | p22@ITGB4 |
| 6.39e-53 | FFCP PHASE2:Hg19::chr10:106205503..106205518,+#_85343325dcb008c533e3b9fb09dc8002 | p@chr10:106205503..106205518, + |
| 6.39e-53 | FFCP PHASE1:Hg19::chr17:73720330..73720338,+#_85343325dcb008c533e3b9fb09dc8002 | p22@ITGB4 |
| 6.39e-53 | FFCP PHASE1:Hg19::chr10:106205503..106205518,+#_85343325dcb008c533e3b9fb09dc8002 | p@chr10:106205503..106205518, + |
| 6.12e-50 | FFCP PHASE2:Hg19::chr19:10665857..10665900,-#_8af6b8542216d05619ddcc5e1656904a | p@chr19:10665857..10665900, - |
| 6.12e-50 | FFCP PHASE1:Hg19::chr19:10665857..10665900,-#_8af6b8542216d05619ddcc5e1656904a | p@chr19:10665857..10665900, - |
| 7.24e-50 | FFCP PHASE1:Hg19::chr11:392625..392628,+#_d56716b3c4a73d589c26505cb8afdf29 | p13@PKP3 |
| 7.24e-50 | FFCP PHASE2:Hg19::chr11:392625..392628,+#_d56716b3c4a73d589c26505cb8afdf29 | p13@PKP3 |
| 5.68e-46 | FFCP PHASE1:Hg19::chr2:231649545..231649550,-#_611485f9778865811398e80a2f519edc | p@chr2:231649545..231649550, - |
| 5.68e-46 | FFCP PHASE2:Hg19::chr12:116955659..116955671,+#_611485f9778865811398e80a2f519edc | p1@ENST00000552992 |
| 5.68e-46 | FFCP PHASE2:Hg19::chr2:231649545..231649550,-#_611485f9778865811398e80a2f519edc | p@chr2:231649545..231649550, - |
| 5.68e-46 | FFCP PHASE1:Hg19::chr12:116955659..116955671,+#_611485f9778865811398e80a2f519edc | p1@ENST00000552992 |
| 6.94e-44 | FFCP PHASE2:Hg19::chr11:13073062..13073067,+#_4b587016d60f3f620efef57587ce9222 | p@chr11:13073062..13073067, + |
| 6.94e-44 | FFCP PHASE1:Hg19::chr11:13073062..13073067,+#_4b587016d60f3f620efef57587ce9222 | p@chr11:13073062..13073067, + |
| 9.28e-44 | FFCP PHASE2:Hg19::chr6:29643393..29643442,-#_a0fb6d85b94fef48c00e4d0c0f915866 | p@chr6:29643393..29643442, - |
| 9.28e-44 | FFCP PHASE1:Hg19::chr6:29643393..29643442,-#_a0fb6d85b94fef48c00e4d0c0f915866 | p@chr6:29643393..29643442, - |
| 1.43e-43 | FFCP PHASE1:Hg19::chr8:105212349..105212367,+#_dcec06988c0d160f18d3d44f69cdcf4f | p@chr8:105212349..105212367, + |
| 1.43e-43 | FFCP PHASE2:Hg19::chr8:105212349..105212367,+#_dcec06988c0d160f18d3d44f69cdcf4f | p@chr8:105212349..105212367, + |
| 1.92e-43 | FFCP PHASE1:Hg19::chr11:93754316..93754353,+#_3b424b97a3c0097d6700e7cfdffe1f3a | p2@HEPHL1 |
| 1.92e-43 | FFCP PHASE2:Hg19::chr11:93754316..93754353,+#_3b424b97a3c0097d6700e7cfdffe1f3a | p2@HEPHL1 |
| 2.21e-43 | FFCP PHASE2:Hg19::chr21:44957855..44957891,-#_a13f64d8b1226f88f25920ff1da56d9c | p@chr21:44957855..44957891, - |
| 2.21e-43 | FFCP PHASE1:Hg19::chr21:44957855..44957891,-#_a13f64d8b1226f88f25920ff1da56d9c | p@chr21:44957855..44957891, - |
| 4.55e-43 | FFCP PHASE1:Hg19::chr2:43768420..43768427,-#_2034d043a2667d939a7d4144a9a94738 | p5@THADA |
| 4.55e-43 | FFCP PHASE1:Hg19::chr9:34662651..34662656,-#_2034d043a2667d939a7d4144a9a94738 | p1@CCL27 |
| 4.55e-43 | FFCP PHASE2:Hg19::chr2:43768420..43768427,-#_2034d043a2667d939a7d4144a9a94738 | p5@THADA |
| 4.55e-43 | FFCP PHASE2:Hg19::chr9:34662651..34662656,-#_2034d043a2667d939a7d4144a9a94738 | p1@CCL27 |
| 6.07e-43 | FFCP PHASE1:Hg19::chr18:9617195..9617198,-#_5cee8a0dd15475f15fff786b033c5de0 | p@chr18:9617195..9617198, - |
| 6.07e-43 | FFCP PHASE2:Hg19::chr18:9617195..9617198,-#_5cee8a0dd15475f15fff786b033c5de0 | p@chr18:9617195..9617198, - |
| 1.91e-42 | FFCP PHASE2:Hg19::chr1:153534027..153534037,+#_cdfbebceb6fc0caeaac346e44a12bbf6 | p@chr1:153534027..153534037, + |
| 1.91e-42 | FFCP PHASE1:Hg19::chr1:153534027..153534037,+#_cdfbebceb6fc0caeaac346e44a12bbf6 | p@chr1:153534027..153534037, + |
| 5.06e-41 | FFCP PHASE2:Hg19::chr7:40883521..40883532,+#_c1013c28f39a50619dc8cd663d3c59cb | p@chr7:40883521..40883532, + |
| 5.06e-41 | FFCP PHASE1:Hg19::chr7:40883521..40883532,+#_c1013c28f39a50619dc8cd663d3c59cb | p@chr7:40883521..40883532, + |
| 6.64e-41 | FFCP PHASE2:Hg19::chr3:149510368..149510386,-#_d5e40a52b5ed7e0eee9e7c1b32c4c0b8 | p5@ANKUB1 |
| 6.64e-41 | FFCP PHASE1:Hg19::chr3:149510368..149510386,-#_d5e40a52b5ed7e0eee9e7c1b32c4c0b8 | p5@ANKUB1 |
| 1.96e-40 | FFCP PHASE1:Hg19::chr1:183213300..183213316,+#_8df9c4409fd7f7071a9236a2f7f6c86a | p@chr1:183213300..183213316, + |
| 1.96e-40 | FFCP PHASE2:Hg19::chr1:183213300..183213316,+#_8df9c4409fd7f7071a9236a2f7f6c86a | p@chr1:183213300..183213316, + |
| 2.93e-40 | FFCP PHASE2:Hg19::chr5:52552639..52552656,-#_0a87b72e1a099f4099b8e8dd8d42a969 | p@chr5:52552639..52552656, - |
| 2.93e-40 | FFCP PHASE1:Hg19::chr5:52552639..52552656,-#_0a87b72e1a099f4099b8e8dd8d42a969 | p@chr5:52552639..52552656, - |
| 4.38e-40 | FFCP PHASE1:Hg19::chrX:19692351..19692356,-#_d0079cb0a9cd18fc3e7f1b64329e22bc | p@chrX:19692351..19692356, - |
| 4.38e-40 | FFCP PHASE1:Hg19::chr4:15920326..15920338,+#_d0079cb0a9cd18fc3e7f1b64329e22bc | p@chr4:15920326..15920338, + |
| 4.38e-40 | FFCP PHASE2:Hg19::chr4:15920326..15920338,+#_d0079cb0a9cd18fc3e7f1b64329e22bc | p@chr4:15920326..15920338, + |
| 4.38e-40 | FFCP PHASE2:Hg19::chrX:19692351..19692356,-#_d0079cb0a9cd18fc3e7f1b64329e22bc | p@chrX:19692351..19692356, - |
| 1.23e-38 | FFCP PHASE1:Hg19::chr2:69026957..69026966,+#_fe6dda236e6e45c503afbd989e582721 | p@chr2:69026957..69026966, + |
| 1.23e-38 | FFCP PHASE2:Hg19::chr2:69026957..69026966,+#_fe6dda236e6e45c503afbd989e582721 | p@chr2:69026957..69026966, + |
| 2.18e-38 | FFCP PHASE2:Hg19::chr7:56051493..56051514,+#_c0fb04e37b501cb331f8c8ea5dfd3b72 | p@chr7:56051493..56051514, + |
| 2.18e-38 | FFCP PHASE1:Hg19::chr7:56051493..56051514,+#_c0fb04e37b501cb331f8c8ea5dfd3b72 | p@chr7:56051493..56051514, + |
| 2.64e-38 | FFCP PHASE2:Hg19::chr3:52099097..52099134,-#_02762cf39b439cb32a01da887d2410ab | p1@C3orf74 |
| 2.64e-38 | FFCP PHASE1:Hg19::chr7:41277861..41277905,+#_02762cf39b439cb32a01da887d2410ab | p@chr7:41277861..41277905, + |
