Personal tools

UBERON:0007684: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
Line 13: Line 13:
|located_in=
|located_in=
|name=uriniferous tubule
|name=uriniferous tubule
|namespace=
|namespace=FANTOM
|obo_creation_date=
|obo_creation_date=
|part_of=UBERON:0002113
|part_of=UBERON:0002113

Latest revision as of 18:02, 12 September 2014

Name:uriniferous tubule
Namespace:FANTOM
Definition:"functional unit of the kidney that forms urine, consisting of two parts, the nephron and the collecting tubule." [ISBN10:0073040584]
Xrefs:
links:
FMA:17691

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0003914(epithelial tube),UBERON:0004819(kidney epithelium),UBERON:0006555(excretory tube)
part_of:UBERON:0002113(kidney)



Children

part of:UBERON:0001229 (renal corpuscle),UBERON:0001285 (nephron)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007684 (uriniferous tubule), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data