CL:0000048: Difference between revisions
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Latest revision as of 17:27, 15 February 2018
| Name: | multi fate stem cell | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "A stem cell that can give rise to multiple lineages of cells." [GOC:add] | ||
| Xrefs: |
| ||
| Synonyms: |
"multi-fate stem cell" EXACT [] "multifate stem cell" EXACT [] "multipotent cell" EXACT [] "multipotent stem cell" EXACT [] |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000723(somatic stem cell) |
|---|
Children
| is a: | CL:0000037 (hematopoietic stem cell),CL:0000047 (neuronal stem cell),CL:0000134 (mesenchymal cell),CL:0000355 (multi-potent skeletal muscle stem cell),CL:0002195 (hepatic stem cell),CL:0002250 (intestinal crypt stem cell),CL:0002351 (progenitor cell of endocrine pancreas),CL:0005020 (lymphangioblast),CL:0005026 (hepatoblast) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 10447-106F6
- 10568-108B1 (mesenchymal stem cell line:Hu5/E18)
- 10813-111B3 (normal embryonic palatal mesenchymal cell line:HEPM)
- 11214-116A8 (Mesenchymal stem cells - umbilical, donor0)
- 11217-116B2 (Mesenchymal stem cells - adipose, donor0)
- 11218-116B3 (Mesenchymal stem cells - hepatic, donor0)
- 11219-116B4 (Mesenchymal Stem Cells - Vertebral, donor1)
- 11229-116C5 (CD14+ monocyte derived endothelial progenitor cells, donor1)
- 11271-116H2 (Hair Follicle Dermal Papilla Cells, donor1)
- 11275-116H6 (Neural stem cells, donor1)
... further results Mouse (Mus musculus)
- 10447-106F6
- 10568-108B1 (mesenchymal stem cell line:Hu5/E18)
- 10813-111B3 (normal embryonic palatal mesenchymal cell line:HEPM)
- 11214-116A8 (Mesenchymal stem cells - umbilical, donor0)
- 11217-116B2 (Mesenchymal stem cells - adipose, donor0)
- 11218-116B3 (Mesenchymal stem cells - hepatic, donor0)
- 11219-116B4 (Mesenchymal Stem Cells - Vertebral, donor1)
- 11229-116C5 (CD14+ monocyte derived endothelial progenitor cells, donor1)
- 11271-116H2 (Hair Follicle Dermal Papilla Cells, donor1)
- 11275-116H6 (Neural stem cells, donor1)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000048 (multi fate stem cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 7.25e-53 | FFCP PHASE1:Hg19::chr19:48828606..48828637,+#_19330db98cde0a0defb85bd3f56e7e18 | p2@EMP3 |
| 7.25e-53 | FFCP PHASE2:Hg19::chr19:48828606..48828637,+#_19330db98cde0a0defb85bd3f56e7e18 | p2@EMP3 |
| 5.38e-51 | FFCP PHASE2:Hg19::chr1:145096480..145096513,+#_f916fefd4c4099baf9230b511078b27d | p2@SEC22B |
| 5.38e-51 | FFCP PHASE1:Hg19::chr1:145096480..145096513,+#_f916fefd4c4099baf9230b511078b27d | p2@SEC22B |
| 1.25e-50 | FFCP PHASE1:Hg19::chr2:182322231..182322262,+#_44c0faca87adbf4f7adcb3cac2149744 | p2@ITGA4 |
| 1.25e-50 | FFCP PHASE2:Hg19::chr2:182322231..182322262,+#_44c0faca87adbf4f7adcb3cac2149744 | p2@ITGA4 |
| 2.25e-50 | FFCP PHASE2:Hg19::chr2:74781828..74781898,+#_6277800f4c98efd1c70c145f985a7d9b | p1@DOK1 |
| 2.25e-50 | FFCP PHASE1:Hg19::chr2:74781828..74781898,+#_6277800f4c98efd1c70c145f985a7d9b | p1@DOK1 |
| 2.15e-45 | FFCP PHASE1:Hg19::chr5:78281092..78281154,-#_c6841bf760d97c2b6e47fa2756f91df0 | p1@ARSB |
| 2.15e-45 | FFCP PHASE2:Hg19::chr5:78281092..78281154,-#_c6841bf760d97c2b6e47fa2756f91df0 | p1@ARSB |
| 1.42e-44 | FFCP PHASE1:Mm9::chr1:146456236..146456244,-#_237ac63867766e70ba7bbb3d81fa74d0 | p1@ENSMUST00000157471 |
| 1.42e-44 | FFCP PHASE2:Mm9::chr1:146456236..146456244,-#_237ac63867766e70ba7bbb3d81fa74d0 | p1@ENSMUST00000157471 |
| 3.18e-44 | FFCP PHASE1:Hg19::chr6:31704075..31704106,-#_249caa3869c58aae696fc219ae3d187e | p2@CLIC1 |
| 3.18e-44 | FFCP PHASE2:Hg19::chr6:31704075..31704106,-#_249caa3869c58aae696fc219ae3d187e | p2@CLIC1 |
| 4.64e-44 | FFCP PHASE1:Hg19::chr2:114647617..114647739,+#_c469fb44cda564232486d6ca5d1e0819 | p1@ACTR3 |
| 4.64e-44 | FFCP PHASE2:Hg19::chr2:114647617..114647739,+#_c469fb44cda564232486d6ca5d1e0819 | p1@ACTR3 |
| 1.2e-43 | FFCP PHASE1:Mm9::chr3:32910877..32910881,+#_2375432704a7b18a319f8bb967ee4bab | p1@ENSMUST00000122716 |
| 1.2e-43 | FFCP PHASE2:Mm9::chr3:32910877..32910881,+#_2375432704a7b18a319f8bb967ee4bab | p1@ENSMUST00000122716 |
| 3.49e-43 | FFCP PHASE1:Hg19::chr19:48828647..48828658,+#_9cc7becc02f0ebc286450c3fd6d9ea10 | p3@EMP3 |
| 3.49e-43 | FFCP PHASE2:Hg19::chr19:48828647..48828658,+#_9cc7becc02f0ebc286450c3fd6d9ea10 | p3@EMP3 |
| 2.32e-42 | FFCP PHASE2:Mm9::chr19:18807230..18807233,+#_ef0df60e0a055c0b07103276f24dc3da | p1@ENSMUST00000083007 |
| 2.32e-42 | FFCP PHASE1:Mm9::chr19:18807230..18807233,+#_ef0df60e0a055c0b07103276f24dc3da | p1@ENSMUST00000083007 |
| 2.87e-42 | FFCP PHASE2:Hg19::chr11:504446..504486,-#_20cdd25fd08f7767d69f8c8ca4750928 | p4@RNH1 |
| 2.87e-42 | FFCP PHASE1:Hg19::chr11:504446..504486,-#_20cdd25fd08f7767d69f8c8ca4750928 | p4@RNH1 |
| 6.15e-42 | FFCP PHASE1:Hg19::chr16:50300440..50300485,+#_8aca61495579016a6600037f6a696b7e | p1@ADCY7 |
| 6.15e-42 | FFCP PHASE2:Hg19::chr16:50300440..50300485,+#_8aca61495579016a6600037f6a696b7e | p1@ADCY7 |
| 2.74e-41 | FFCP PHASE1:Hg19::chr1:183604794..183604908,-#_c29af3d2f64c4d0f736511fc9d9a66ec | p1@ARPC5 |
| 2.74e-41 | FFCP PHASE2:Hg19::chr1:183604794..183604908,-#_c29af3d2f64c4d0f736511fc9d9a66ec | p1@ARPC5 |
| 1.35e-40 | FFCP PHASE1:Hg19::chr12:75874580..75874611,+#_d25e95f3e751d8fd64c5b4b5ad23f9e1 | p2@GLIPR1 |
| 1.35e-40 | FFCP PHASE2:Hg19::chr12:75874580..75874611,+#_d25e95f3e751d8fd64c5b4b5ad23f9e1 | p2@GLIPR1 |
| 5.63e-40 | FFCP PHASE1:Mm9::chr4:32085713..32085717,-#_d5fa3e2238691028efaa95a85812732c | p1@ENSMUST00000122491 |
| 5.63e-40 | FFCP PHASE2:Mm9::chr4:32085713..32085717,-#_d5fa3e2238691028efaa95a85812732c | p1@ENSMUST00000122491 |
| 1.75e-39 | FFCP PHASE2:Hg19::chr15:90358115..90358195,-#_5d3e59ed50bb3648966c77cb1fdcd55b | p3@ANPEP |
| 1.75e-39 | FFCP PHASE1:Hg19::chr15:90358115..90358195,-#_5d3e59ed50bb3648966c77cb1fdcd55b | p3@ANPEP |
| 1.93e-39 | FFCP PHASE1:Hg19::chr15:73076030..73076121,-#_5c66b07a742ce0b56067d8fb6699fad5 | p1@ADPGK |
| 1.93e-39 | FFCP PHASE2:Hg19::chr15:73076030..73076121,-#_5c66b07a742ce0b56067d8fb6699fad5 | p1@ADPGK |
| 3.99e-39 | FFCP PHASE1:Mm9::chr3:19460250..19460260,+#_a16933335ff7229d2b740418c8364d2b | p1@ENSMUST00000083241 |
| 3.99e-39 | FFCP PHASE2:Mm9::chr3:19460250..19460260,+#_a16933335ff7229d2b740418c8364d2b | p1@ENSMUST00000083241 |
| 5.39e-39 | FFCP PHASE2:Hg19::chr2:182322070..182322155,+#_94dbea9ccfc8a4362d0157ae654ce136 | p1@ITGA4 |
| 5.39e-39 | FFCP PHASE1:Hg19::chr2:182322070..182322155,+#_94dbea9ccfc8a4362d0157ae654ce136 | p1@ITGA4 |
| 5.79e-39 | FFCP PHASE2:Mm9::chr11:48596086..48596090,+#_061be91a05e409b28b8b79e3c16f47b1 | p@chr11:48596086..48596090, + |
| 5.79e-39 | FFCP PHASE1:Mm9::chr11:48596086..48596090,+#_061be91a05e409b28b8b79e3c16f47b1 | p@chr11:48596086..48596090, + |
| 2.16e-38 | FFCP PHASE2:Mm9::chr16:72264646..72264650,-#_10bc43166f93f26ce6749fa9af7b3bb0 | p@chr16:72264646..72264650, - |
| 2.16e-38 | FFCP PHASE1:Mm9::chr16:72264646..72264650,-#_10bc43166f93f26ce6749fa9af7b3bb0 | p@chr16:72264646..72264650, - |
| 2.82e-38 | FFCP PHASE1:Hg19::chr18:18691563..18691610,-#_43cbe38f2b5db49603c3f6f13fdc76d8 | p4@ROCK1 |
| 2.82e-38 | FFCP PHASE2:Hg19::chr18:18691563..18691610,-#_43cbe38f2b5db49603c3f6f13fdc76d8 | p4@ROCK1 |
| 4.54e-38 | FFCP PHASE1:Mm9::chr4:131826124..131826129,-#_7c0fe2d8d34dcf3b6d4366ecb0299838 | p1@ENSMUST00000104135 |
| 4.54e-38 | FFCP PHASE2:Mm9::chr4:131826124..131826129,-#_7c0fe2d8d34dcf3b6d4366ecb0299838 | p1@ENSMUST00000104135 |
| 5.72e-38 | FFCP PHASE1:Mm9::chr19:26334980..26334985,-#_b0173c19df41d880125597954c16c9a7 | p1@ENSMUST00000122640 |
| 5.72e-38 | FFCP PHASE2:Mm9::chr19:26334980..26334985,-#_b0173c19df41d880125597954c16c9a7 | p1@ENSMUST00000122640 |
| 6.33e-38 | FFCP PHASE2:Hg19::chr1:20987936..20987969,-#_a7baa0d9731bc947709ef98ff221745c | p2@DDOST |
| 6.33e-38 | FFCP PHASE1:Hg19::chr1:20987936..20987969,-#_a7baa0d9731bc947709ef98ff221745c | p2@DDOST |
| 1.1e-37 | FFCP PHASE1:Hg19::chr15:90358048..90358103,-#_68c80fb861f30605ea9a4cfaad3dcca4 | p1@ANPEP |
| 1.1e-37 | FFCP PHASE2:Hg19::chr15:90358048..90358103,-#_68c80fb861f30605ea9a4cfaad3dcca4 | p1@ANPEP |
| 2.32e-37 | FFCP PHASE1:Hg19::chr10:17271909..17272033,-#_82ac48c452da6186667846834f07e525 | p1@uc001iot.1 |
| 2.32e-37 | FFCP PHASE2:Hg19::chr10:17271909..17272033,-#_82ac48c452da6186667846834f07e525 | p1@uc001iot.1 |
| 2.76e-37 | FFCP PHASE1:Hg19::chr1:46016703..46016755,+#_f64bed359331411ceb64a1d8e5a304a1 | p2@AKR1A1 |
| 2.76e-37 | FFCP PHASE2:Hg19::chr1:46016703..46016755,+#_f64bed359331411ceb64a1d8e5a304a1 | p2@AKR1A1 |
| 6.14e-37 | FFCP PHASE2:Hg19::chr20:61584026..61584096,+#_f97060d0d0732565f9c466d406893f69 | p1@SLC17A9 |
| 6.14e-37 | FFCP PHASE1:Hg19::chr20:61584026..61584096,+#_f97060d0d0732565f9c466d406893f69 | p1@SLC17A9 |
| 9.2e-37 | FFCP PHASE1:Hg19::chr12:110888103..110888172,-#_2eb10012e5fcef23dcc4e9c882214ff3 | p1@ARPC3 |
| 9.2e-37 | FFCP PHASE2:Hg19::chr12:110888103..110888172,-#_2eb10012e5fcef23dcc4e9c882214ff3 | p1@ARPC3 |
| 9.52e-37 | FFCP PHASE2:Hg19::chr11:504867..504925,-#_7cceff491046a83b3e28161652f6dc04 | p3@RNH1 |
| 9.52e-37 | FFCP PHASE1:Hg19::chr11:504867..504925,-#_7cceff491046a83b3e28161652f6dc04 | p3@RNH1 |
| 1.33e-36 | FFCP PHASE2:Mm9::chr3:72925786..72925790,+#_af84eb8376db156810bf4d8de007a062 | p@chr3:72925786..72925790, + |
| 1.33e-36 | FFCP PHASE1:Mm9::chr3:72925786..72925790,+#_af84eb8376db156810bf4d8de007a062 | p@chr3:72925786..72925790, + |
| 2.06e-36 | FFCP PHASE2:Hg19::chr2:102091566..102091581,-#_0f1280e9a0a818f62d04179be859e26c | p1@RFX8 |
| 2.06e-36 | FFCP PHASE1:Hg19::chr2:102091566..102091581,-#_0f1280e9a0a818f62d04179be859e26c | p1@RFX8 |
| 3.2e-36 | FFCP PHASE1:Hg19::chr12:75874525..75874549,+#_2463a1962eafe965da3b9e3e7bdc18d3 | p1@GLIPR1 |
| 3.2e-36 | FFCP PHASE2:Hg19::chr12:75874525..75874549,+#_2463a1962eafe965da3b9e3e7bdc18d3 | p1@GLIPR1 |
| 4.77e-36 | FFCP PHASE1:Mm9::chr14:106660467..106660471,-#_fd9cfd7e49f2bf855f171f4f90294c11 | p1@ENSMUST00000083259 |
| 4.77e-36 | FFCP PHASE2:Mm9::chr14:106660467..106660471,-#_fd9cfd7e49f2bf855f171f4f90294c11 | p1@ENSMUST00000083259 |
| 6.06e-36 | FFCP PHASE2:Hg19::chr12:75874561..75874574,+#_57561a22f8218e3d760e7f3e9393441f | p3@GLIPR1 |
| 6.06e-36 | FFCP PHASE1:Hg19::chr12:75874561..75874574,+#_57561a22f8218e3d760e7f3e9393441f | p3@GLIPR1 |
| 6.53e-36 | FFCP PHASE1:Hg19::chr21:26934434..26934452,+#_5607bb085e294b48510a326385d5f8b8 | p1@MIR155HG |
| 6.53e-36 | FFCP PHASE2:Hg19::chr21:26934434..26934452,+#_5607bb085e294b48510a326385d5f8b8 | p1@MIR155HG |
| 1.05e-35 | FFCP PHASE2:Hg19::chr2:192542577..192542595,-#_4e066c2e80c2fa283bee12ee639b4619 | p@chr2:192542577..192542595, - |
| 1.05e-35 | FFCP PHASE1:Hg19::chr2:192542577..192542595,-#_4e066c2e80c2fa283bee12ee639b4619 | p@chr2:192542577..192542595, - |
| 1.33e-35 | FFCP PHASE2:Mm9::chr10:104477319..104477348,+#_e654ed02bcce4f1b7df3b5f64b249201 | p1@ENSMUST00000082498 |
| 1.33e-35 | FFCP PHASE1:Mm9::chr10:104477319..104477348,+#_e654ed02bcce4f1b7df3b5f64b249201 | p1@ENSMUST00000082498 |
| 1.37e-35 | FFCP PHASE2:Hg19::chr9:35112376..35112395,-#_1d3b235d4e3a670da7621c8c4b862ceb | p@chr9:35112376..35112395, - |
| 1.37e-35 | FFCP PHASE1:Hg19::chr9:35112376..35112395,-#_1d3b235d4e3a670da7621c8c4b862ceb | p@chr9:35112376..35112395, - |
| 4.08e-35 | FFCP PHASE1:Hg19::chr11:504942..504959,-#_39af1eeaa8b7dfc07687c1627be2c822 | p5@RNH1 |
| 4.08e-35 | FFCP PHASE2:Hg19::chr11:504942..504959,-#_39af1eeaa8b7dfc07687c1627be2c822 | p5@RNH1 |
| 4.18e-35 | FFCP PHASE1:Mm9::chr5:115939562..115939592,-#_b958a773c9db7ff2a41b4361fdfb1124 | p@chr5:115939562..115939592, - |
| 4.18e-35 | FFCP PHASE2:Mm9::chr5:115939562..115939592,-#_b958a773c9db7ff2a41b4361fdfb1124 | p@chr5:115939562..115939592, - |
| 4.31e-35 | FFCP PHASE2:Hg19::chr1:20987982..20988007,-#_f5c8f1d0dbd55149d7d56c75a22b83d3 | p3@DDOST |
| 4.31e-35 | FFCP PHASE1:Hg19::chr1:20987982..20988007,-#_f5c8f1d0dbd55149d7d56c75a22b83d3 | p3@DDOST |
| 4.56e-35 | FFCP PHASE2:Hg19::chr14:73930324..73930350,-#_5c7db18e7153a980a05d788a10c71f08 | p2@NUMB |
| 4.56e-35 | FFCP PHASE1:Hg19::chr14:73930324..73930350,-#_5c7db18e7153a980a05d788a10c71f08 | p2@NUMB |
| 4.79e-35 | FFCP PHASE2:Mm9::chr5:115939465..115939467,+#_0d8f82c51e93d5460c14166f9e9bd85f | p1@ENSMUST00000102044 |
| 4.79e-35 | FFCP PHASE1:Mm9::chr5:115939465..115939467,+#_0d8f82c51e93d5460c14166f9e9bd85f | p1@ENSMUST00000102044 |
| 4.81e-35 | FFCP PHASE1:Hg19::chr3:50378235..50378286,-#_405f885f56c7c2cb401ac64d7d8f400e | p2@RASSF1 |
| 4.81e-35 | FFCP PHASE2:Hg19::chr3:50378235..50378286,-#_405f885f56c7c2cb401ac64d7d8f400e | p2@RASSF1 |
| 7.58e-35 | FFCP PHASE2:Hg19::chr5:114938090..114938226,-#_9a6c0251e9116b619041d4a49c937ce9 | p1@TICAM2, p2@TMED7-TICAM2 |
| 7.58e-35 | FFCP PHASE1:Hg19::chr5:114938090..114938226,-#_9a6c0251e9116b619041d4a49c937ce9 | p1@TICAM2, p2@TMED7-TICAM2 |
| 1.48e-34 | FFCP PHASE2:Mm9::chr11:68834407..68834410,+#_92933a9a8197897dde8cc2653a478544 | p@chr11:68834407..68834410, + |
| 1.48e-34 | FFCP PHASE1:Mm9::chr11:68834407..68834410,+#_92933a9a8197897dde8cc2653a478544 | p@chr11:68834407..68834410, + |
| 1.62e-34 | FFCP PHASE2:Hg19::chr19:2269520..2269526,+#_5485992d400e63ea04ab477beef47aef | p1@OAZ1 |
| 1.62e-34 | FFCP PHASE1:Hg19::chr19:2269520..2269526,+#_5485992d400e63ea04ab477beef47aef | p1@OAZ1 |
