FFCP PHASE2:Hg19::chr14:105635038..105635047,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:3714 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:6189 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=3714 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=6189 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q9Y219 | ||
|association_with_transcript=113bp_to_ENST00000331782,ENST00000347004,NM_002226,NM_145159,uc001yqg.2,uc001yqh.2_5end | |association_with_transcript=113bp_to_ENST00000331782,ENST00000347004,NM_002226,NM_145159,uc001yqg.2,uc001yqh.2_5end | ||
|cluster_id=chr14:105635038..105635047,- | |cluster_id=chr14:105635038..105635047,- |
Latest revision as of 18:28, 18 September 2015
Short description: | p4@JAG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_JAG2_5end |
Coexpression cluster: | NA |
Association with transcript: | 113bp_to_ENST00000331782, ENST00000347004, NM_002226, NM_145159, uc001yqg.2, uc001yqh.2_5end |
EntrezGene: | JAG2 |
HGNC: | 6189 |
UniProt: | Q9Y219 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p4@JAG2 |
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0.5
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2.5
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3.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.49e-26 | 42 |
endodermal cell | 2.41e-21 | 58 |
respiratory epithelial cell | 5.23e-17 | 13 |
epithelial cell of alimentary canal | 1.45e-14 | 20 |
epithelial cell of tracheobronchial tree | 1.69e-11 | 9 |
epithelial cell of lower respiratory tract | 1.69e-11 | 9 |
epithelial cell | 1.22e-10 | 253 |
duct epithelial cell | 2.33e-09 | 3 |
branched duct epithelial cell | 2.33e-09 | 3 |
tracheal epithelial cell | 2.33e-09 | 3 |
Showing 1 to 10 of 12 entries
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 5.84e-15 | 4 |
respiratory system mucosa | 5.84e-15 | 4 |
respiratory system | 8.23e-14 | 74 |
oral opening | 4.95e-13 | 22 |
orifice | 5.61e-10 | 36 |
saliva-secreting gland | 8.28e-10 | 6 |
gland of oral region | 8.28e-10 | 6 |
gland of foregut | 8.28e-10 | 6 |
oral gland | 8.28e-10 | 6 |
oral cavity | 8.28e-10 | 6 |
Showing 1 to 10 of 32 entries
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 3.37e-11 | 14 |
skin squamous cell carcinoma | 1.22e-07 | 1 |
keratoacanthoma | 1.22e-07 | 1 |
islet cell tumor | 1.30e-07 | 1 |
endocrine pancreas cancer | 1.30e-07 | 1 |
pancreatic endocrine carcinoma | 1.30e-07 | 1 |
Showing 1 to 6 of 6 entries