FFCP PHASE1:Hg19::chr1:29138600..29138609,+: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=4985 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=8153 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=P41143 | ||
|association_with_transcript=-44bp_to_ENST00000234961,NM_000911,uc001brf.1_5end | |association_with_transcript=-44bp_to_ENST00000234961,NM_000911,uc001brf.1_5end | ||
|cluster_id=chr1:29138600..29138609,+ | |cluster_id=chr1:29138600..29138609,+ | ||
Latest revision as of 11:05, 17 September 2015
| Short description: | p4@OPRD1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_4_at_OPRD1_5end |
| Coexpression cluster: | C53_medulloblastoma_pineal_retinoblastoma_small_retina_eye_pituitary |
| Association with transcript: | -44bp_to_ENST00000234961, NM_000911, uc001brf.1_5end |
| EntrezGene: | OPRD1 |
| HGNC: | 8153 |
| UniProt: | P41143 |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p4@OPRD1 |
|---|
0.0
0.5
1.0
1.5
2.0
2.5
3.0
3.5
4.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| migratory neural crest cell | 2.84e-11 | 41 |
| neurectodermal cell | 3.34e-08 | 59 |
| ectodermal cell | 6.64e-07 | 72 |
Showing 1 to 3 of 3 entries
| Ontology term | p-value | n |
|---|---|---|
| sympathetic nervous system | 3.31e-40 | 5 |
| autonomic nervous system | 3.31e-40 | 5 |
| peripheral nervous system | 6.41e-23 | 8 |
| occipital lobe | 3.26e-11 | 5 |
| nervous system | 1.88e-09 | 89 |
Showing 1 to 5 of 5 entries
| Ontology term | p-value | n |
|---|---|---|
| neuroendocrine tumor | 9.87e-34 | 6 |
| neuroectodermal tumor | 9.44e-21 | 10 |
| germ cell and embryonal cancer | 4.74e-10 | 22 |
| germ cell cancer | 4.74e-10 | 22 |
Showing 1 to 4 of 4 entries
