FFCP PHASE1:Hg19::chr21:47531348..47531389,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=1292 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=2212 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= |
Latest revision as of 22:47, 18 September 2015
Short description: | p10@COL6A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_COL6A2_5end |
Coexpression cluster: | C198_Mesenchymal_Hair_Hepatic_Fibroblast_Smooth_tenocyte_Pericytes |
Association with transcript: | 0bp_to_ENST00000397763_5end |
EntrezGene: | COL6A2 |
HGNC: | 2212 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p10@COL6A2 |
---|
0
5
10
15
20
25
30
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.83e-30 | 76 |
multi fate stem cell | 2.75e-20 | 427 |
muscle precursor cell | 3.42e-20 | 58 |
myoblast | 3.42e-20 | 58 |
multi-potent skeletal muscle stem cell | 3.42e-20 | 58 |
somatic stem cell | 3.18e-19 | 433 |
muscle cell | 5.08e-19 | 55 |
stem cell | 3.12e-18 | 441 |
electrically responsive cell | 1.45e-15 | 61 |
electrically active cell | 1.45e-15 | 61 |
Showing 1 to 10 of 19 entries
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 8.71e-25 | 73 |
somite | 1.16e-24 | 71 |
presomitic mesoderm | 1.16e-24 | 71 |
presumptive segmental plate | 1.16e-24 | 71 |
dermomyotome | 1.16e-24 | 71 |
trunk paraxial mesoderm | 1.16e-24 | 71 |
paraxial mesoderm | 5.14e-24 | 72 |
presumptive paraxial mesoderm | 5.14e-24 | 72 |
epithelial vesicle | 1.58e-20 | 78 |
multilaminar epithelium | 4.80e-20 | 83 |
Showing 1 to 10 of 50 entries