FFCP PHASE1:Mm9::chr5:67490412..67490421,-: Difference between revisions
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|id=chr5:67490412..67490421,-
|short_description=p6@Phox2b
|description=CAGE_peak_6_at_Phox2b_5end
|association_with_transcript=-47bp_to_NM_008888,uc008xpm.1,uc008x...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=18935 | |EntrezGene=18935 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=114 | |||
|TSSclassifier=NA | |||
|UniProt=O35690,Q8C741 | |UniProt=O35690,Q8C741 | ||
|association_with_transcript=-47bp_to_NM_008888,uc008xpm.1,uc008xpn.1_5end | |||
|cluster_id=chr5:67490412..67490421,- | |||
|description=CAGE_peak_6_at_Phox2b_5end | |||
|id=chr5:67490412..67490421,- | |||
|ontology_enrichment_celltype=CL:0000107!2.17e-18!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,3.71e-57,9;CL:0000540,5.34e-15,33;CL:0000047,5.34e-15,33;CL:0000031,5.34e-15,33;CL:0000404,5.34e-15,33;CL:0000393,1.51e-12,39;CL:0000211,1.51e-12,39;CL:0002319,2.73e-11,43;CL:0000221,5.19e-11,44;CL:0000133,5.19e-11,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002342!7.84e-19!10;UBERON:0005062!7.84e-19!10;UBERON:0002410!2.17e-18!9;UBERON:0000010!1.23e-14!11;UBERON:0002369!3.12e-13!7;UBERON:0006858!3.12e-13!7;UBERON:0000013!2.76e-07!3;UBERON:0002005!3.62e-07!3;UBERON:0005428!3.62e-07!3;UBERON:0000011!4.14e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,3.71e-57,9;UBERON:0000010,1.21e-46,11;UBERON:0000013,2.21e-20,3;UBERON:0010313,5.37e-20,3;UBERON:0002342,5.37e-20,3;UBERON:0002005,5.37e-20,3;UBERON:0005428,5.37e-20,3;UBERON:0005062,5.37e-20,3;UBERON:0000011,8.33e-20,3;UBERON:0002369,4.05e-14,7;UBERON:0006858,4.05e-14,7;UBERON:0003064,3.48e-07,14 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92974780784272,1.04091196059682,0.913396434936424,0.691846491768175,1.20578112442098,1.05829836422134,0.376999773989026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0,0,0,0,0.213288250535234,1.16118335930219,0.77320476793256,0.201683524623343,0.667134131534611,0.570676878337677,0,0.164698954724011,0.754005626400808,0,0.38992817423824,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,4.73262329124385,7.02789739733949,7.10897212518236,5.9742199488138,6.90675889655422,4.81230102341015,10.1202675418724,10.2289550268959,5.53402889125133,0,0,0,0,0,0,0,0.604647113929502,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0.632671987162271,0.813277868507395,0.540026704109006,0.209088296014469,0,0,0.165306911450672,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0.183843508450014,0.222246727801615,0,0,0,0,0,0,0.0640251524048693,0,0,0.115884325944855,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0,0,0.154936841185966,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92974780784272,1.04091196059682,0.913396434936424,0.691846491768175,1.20578112442098,1.05829836422134,0.376999773989026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0,0,0,0,0,0,0.213288250535234,1.16118335930219,0.77320476793256,0.201683524623343,0.667134131534611,0.570676878337677,0,0.164698954724011,0.754005626400808,0,0.38992817423824,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,4.73262329124385,7.02789739733949,7.10897212518236,5.9742199488138,6.90675889655422,4.81230102341015,10.1202675418724,10.2289550268959,5.53402889125133,0,0,0,0,0,0,0,0.604647113929502,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0.632671987162271,0.813277868507395,0.540026704109006,0.209088296014469,0,0,0.165306911450672,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0.183843508450014,0.222246727801615,0,0,0,0,0,0,0.0640251524048693,0,0,0.115884325944855,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0,0,0.154936841185966,0,0,0,0,0,0,0 | ||
|short_description=p6@Phox2b | |||
}} | }} |
Latest revision as of 04:20, 26 September 2015
Short description: | p6@Phox2b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Phox2b_5end |
Coexpression cluster: | MCL_coexpression_mm9:114 |
Association with transcript: | -47bp_to_NM_008888, uc008xpm.1, uc008xpn.1_5end |
EntrezGene: | Phox2b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 3.71e-57 | 9 |
neuron | 5.34e-15 | 33 |
neuronal stem cell | 5.34e-15 | 33 |
neuroblast | 5.34e-15 | 33 |
electrically signaling cell | 5.34e-15 | 33 |
electrically responsive cell | 1.51e-12 | 39 |
electrically active cell | 1.51e-12 | 39 |
neural cell | 2.73e-11 | 43 |
ectodermal cell | 5.19e-11 | 44 |
neurectodermal cell | 5.19e-11 | 44 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 3.71e-57 | 9 |
peripheral nervous system | 1.21e-46 | 11 |
sympathetic nervous system | 2.21e-20 | 3 |
neural crest-derived structure | 5.37e-20 | 3 |
neural crest | 5.37e-20 | 3 |
enteric nervous system | 5.37e-20 | 3 |
vagal neural crest | 5.37e-20 | 3 |
neural fold | 5.37e-20 | 3 |
parasympathetic nervous system | 8.33e-20 | 3 |
adrenal gland | 4.05e-14 | 7 |
adrenal/interrenal gland | 4.05e-14 | 7 |
intermediate mesoderm | 3.48e-07 | 14 |