Personal tools

FFCP PHASE1:Mm9::chr6:71390459..71390517,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr6:71390459..71390517,- |short_description=p1@Rmnd5a |description=CAGE_peak_1_at_Rmnd5a_5end |association_with_transcript=113bp_to_ENSMUST00000002292,NM_02428...")
 
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr6:71390459..71390517,-
|DHSsupport=NA
|short_description=p1@Rmnd5a
|DPIdataset=NA
|description=CAGE_peak_1_at_Rmnd5a_5end
|association_with_transcript=113bp_to_ENSMUST00000002292,NM_024288,uc009cgu.2_5end
|EntrezGene=68477
|EntrezGene=68477
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q80YQ8
|UniProt=Q80YQ8
|association_with_transcript=113bp_to_ENSMUST00000002292,NM_024288,uc009cgu.2_5end
|cluster_id=chr6:71390459..71390517,-
|description=CAGE_peak_1_at_Rmnd5a_5end
|id=chr6:71390459..71390517,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004921!4.85e-09!126;UBERON:0004185!4.85e-09!126;UBERON:0001007!1.07e-08!128;UBERON:0001555!1.07e-08!128;UBERON:0007026!1.07e-08!128;UBERON:0004119!3.61e-08!130;UBERON:0000925!3.61e-08!130;UBERON:0006595!3.61e-08!130
|ontology_enrichment_uberon_v019_2=UBERON:0004921,1.57e-08,114;UBERON:0001007,3.52e-08,116;UBERON:0001555,3.52e-08,116;UBERON:0007026,3.52e-08,116;UBERON:0004119,1.20e-07,118;UBERON:0000925,1.20e-07,118;UBERON:0006595,1.20e-07,118
|phase1_expression=21.1396478178328,38.0383194326904,34.1249429542152,99.8131897312539,102.683624639001,29.0431140407569,20.3242997318107,26.3411579820816,17.0354353803517,16.8526458951835,9.24577028417727,9.57265907944037,19.6880839420887,20.1941129587884,17.6548173762301,18.8301998672538,25.8837894907414,14.3535285237998,17.1393042007173,14.004858509335,14.0321428749265,14.1986060217266,13.8435888243636,16.3192271249275,14.4527847072317,17.2269589234506,34.0301976965669,20.2542958724736,26.6032787238923,21.674591159354,9.3126814475228,8.25539875497521,14.1464901144451,0,13.2871745085586,11.9688944658114,14.9043630071529,17.1597968602132,10.9386948233332,15.1821885752402,9.99993529652724,17.0761371239611,14.5653105909346,8.18329316841252,8.11015449756117,6.9747765821439,3.12956537739216,3.92445281484804,4.61340983742391,12.0546537426056,4.19959264876088,2.87505128729943,19.7983475148129,33.3666585325218,32.2650047176765,9.77585856936598,13.7536051170603,17.0171790451556,11.3297218081375,10.5798195854407,13.3104594736298,5.08266798103698,2.66788438833342,6.29929802096979,9.88866362566974,4.2628806896766,5.39280198933128,3.07374644257244,11.0947885170071,10.2604513132085,10.0955981448663,14.568200204594,9.49734726091938,10.9016811301309,11.7889929352431,18.3843757322004,31.9336054898227,31.6664598451266,27.4955694528676,8.44072241473241,10.1551284398675,10.939180781692,21.7762739221077,12.380777420697,19.5581757154317,16.7938293719991,15.3761415263031,12.8615617619457,5.98236927332154,8.84187253249391,13.3337664802772,16.3480536626463,10.879541339324,37.7792234146472,33.1385972898311,29.5697745484241,28.7911061270091,7.83979483859066,7.27400812888033,3.5333957451034,30.7038655113164,19.2489716121477,20.3844191765317,21.3320010945999,8.87613268145978,10.1343946190039,11.62706223534,23.8644308612835,11.3932668804756,18.7037095221679,12.4909435271618,7.91610243611567,13.6063143381075,14.9215414147096,17.1679512418129,22.7456530306713,14.0901131608593,18.074919614989,22.1152637987469,18.1178871941098,27.1635067706284,20.8496358848145,24.2309289583559,41.2820923786281,45.6593820853332,16.0937944781413,12.4607729486157,13.7977628128484,9.40319680340679,21.8694333531041,25.1625331550245,13.9476330845279,16.339486098074,27.872984849006,20.778804455956,22.2270530402828,19.0439610400091,25.0058010926287,9.60346482047964,21.8859530121933,15.4843327125617,16.0931473103431,15.3052810334547,16.8789395976001,20.955241738609,15.6298738747517,22.8632207925738,28.1986674105527,15.089759505299,17.9650776159428,17.7710635405588,14.4669183402199,15.5706459566335,17.0643561595862,24.2822920961373,16.7188784127534,4.91549231119264,6.94839349209731,5.68326998791185,14.7059298500206,11.4917769390737,15.4853372856473,13.494449928357,19.8731874064878,15.8895126274,18.1376476905318,16.3646774853768,18.5656894363799,16.1268652915211,21.8342727225197,24.8070557210319,28.3627975605145,26.3460138349261,29.6596185460422,22.2907345477975,12.3485534855141,26.4335026387038,15.6025834331491,20.6889603019177,19.9723537799977,18.4280469690593,17.3447831176075,22.4601824283319,20.7345932462689,22.7773949541366,28.1635212578059,23.8768448360256,25.4664284212673,22.8107981929371,17.0775687644302,23.9913235360911,27.4814957091027,9.10405924574792,15.5377977149231,18.0332377076929,19.1432248174595,19.3952487167626,20.9004743273149,21.9430783821173,18.7464887934095,21.9798218977925,21.1009150306279,25.791378556582,14.5155241973002,15.7247196090562,13.9414509678609,16.2288097110802,19.2941727801933,18.0784354764808,15.8232875597946,19.1319567594542,13.7280706594041,23.0029130443767,20.0956111740992,12.793544597697,18.4382580901392,22.0658818631952,27.0168371963486,18.4753190166605,12.3169417650815,14.8298128562244,16.1257831486429,18.0711491182147,20.4357634079015,18.5674039891091,26.3430424608028,17.9704064281058,19.0459633097946,23.5993057613081,18.6804178775941,19.3407179689803,20.2508682014116,19.6028669121054,13.053736411649,13.277635371514,19.0396354950265,20.871576698413,26.7242645430223,9.50822683184717,37.1132262990428,10.0962630213202,14.055794794679,20.2497993868831,18.6395662402991,18.7150886229211,26.8922704249391,19.4309136803949,22.2114452012597,19.7643888973262,27.9549545286972,17.1747503102005,14.9575107080494,15.4742611385897,20.7862354945395,35.84118735179,9.95400608235424,12.09294227859,18.483297816078,13.5838870725155,24.2873766875703,28.1686839553361,13.8142817201452,17.8248689192361,21.4904995396355,23.1920938864997,34.0347292719017,27.9160476718106,19.0864759673189,14.3588138998857,19.0759961178117,23.9409315417069,19.7989387538298,17.1130981426206,15.22324745573,9.1521966144847,16.3110694565142,26.0223509704855,30.0092980353494,29.7094545120466,23.7632924216934,27.5750114647245,33.6488844477376,23.0269860937582,23.3635880533242,16.9162171989874,13.8279201535359,14.8155621895769,25.8064786096427,18.7271091977804,22.6490391474457,10.8786195196067,13.2953879707475,18.2423965421839,21.0027535963325,17.0821436533813,14.0290432317526,17.0648438498446,22.7906242655771,22.7097066296025,25.4893614667311,21.0766312099607,24.3433026045148,40.9583315602065,32.9309835936071,7.32800820289447,16.5963366108816,14.2294301793104,11.4726201122988,9.17034746691891,11.6579726588637,16.5473706490513,12.4996209450192,15.6240423194309,9.90494895386625,17.8578603879877,49.9297570592522,9.32535990334755,13.4551353885924,17.7991527479579,34.0150721768215,38.1468201180029,34.9768758103109,36.331623684946,40.2856135293109,40.0085734938749,48.2957426805466,51.4577610305893,53.2051484271022,52.4777290795245,34.0095575422817,12.2092274355736,8.25367480807176,7.21903850365537,23.375940877895,24.3987218086537,19.0477689237956,27.6535209011995,25.5801773058035,18.0720589637461,18.8733346967943,13.1765968091061,25.9498305338968,13.7016503954128,18.1294535373528,18.9006300064906,13.9599572999508,14.0474146785103,13.4617681055473,20.1347454313303,14.7639203158381,10.0732827394939,14.1001895899611,14.6729213839588,19.4874118957015,15.7795176739147,15.8646994073949,16.3668796891826,16.6780159764106,14.4483200937437,15.0901073108861,16.6681883296391,18.3752187401975,17.5752535004177,20.4806287251722,18.3097234992872,18.5192851645157,16.4834360321323,17.3694725758589,18.172070376427,16.1502983604997,18.598022815891,19.040380578835,18.0690010397435,17.0921507941187,21.2196448532416,13.6796249947678,16.2964936615034,23.0068331379673,20.6424931536063,20.7844457812439,21.2800142448238,19.3671051482457,14.4679958235856,12.2407183189594,17.778802241851,16.7599422157673,20.0852748672286,18.7502706251588,22.02744438394
|phase1_expression=21.1396478178328,38.0383194326904,34.1249429542152,99.8131897312539,102.683624639001,29.0431140407569,20.3242997318107,26.3411579820816,17.0354353803517,16.8526458951835,9.24577028417727,9.57265907944037,19.6880839420887,20.1941129587884,17.6548173762301,18.8301998672538,25.8837894907414,14.3535285237998,17.1393042007173,14.004858509335,14.0321428749265,14.1986060217266,13.8435888243636,16.3192271249275,14.4527847072317,17.2269589234506,34.0301976965669,20.2542958724736,26.6032787238923,21.674591159354,9.3126814475228,8.25539875497521,14.1464901144451,0,13.2871745085586,11.9688944658114,14.9043630071529,17.1597968602132,10.9386948233332,15.1821885752402,9.99993529652724,17.0761371239611,14.5653105909346,8.18329316841252,8.11015449756117,6.9747765821439,3.12956537739216,3.92445281484804,4.61340983742391,12.0546537426056,4.19959264876088,2.87505128729943,19.7983475148129,33.3666585325218,32.2650047176765,9.77585856936598,13.7536051170603,17.0171790451556,11.3297218081375,10.5798195854407,13.3104594736298,5.08266798103698,2.66788438833342,6.29929802096979,9.88866362566974,4.2628806896766,5.39280198933128,3.07374644257244,11.0947885170071,10.2604513132085,10.0955981448663,14.568200204594,9.49734726091938,10.9016811301309,11.7889929352431,18.3843757322004,31.9336054898227,31.6664598451266,27.4955694528676,8.44072241473241,10.1551284398675,10.939180781692,21.7762739221077,12.380777420697,19.5581757154317,16.7938293719991,15.3761415263031,12.8615617619457,5.98236927332154,8.84187253249391,13.3337664802772,16.3480536626463,10.879541339324,37.7792234146472,33.1385972898311,29.5697745484241,28.7911061270091,7.83979483859066,7.27400812888033,3.5333957451034,30.7038655113164,19.2489716121477,20.3844191765317,21.3320010945999,8.87613268145978,10.1343946190039,11.62706223534,23.8644308612835,11.3932668804756,18.7037095221679,12.4909435271618,7.91610243611567,13.6063143381075,14.9215414147096,17.1679512418129,22.7456530306713,14.0901131608593,18.074919614989,22.1152637987469,18.1178871941098,27.1635067706284,20.8496358848145,24.2309289583559,41.2820923786281,45.6593820853332,16.0937944781413,12.4607729486157,13.7977628128484,9.40319680340679,21.8694333531041,25.1625331550245,13.9476330845279,16.339486098074,27.872984849006,20.778804455956,22.2270530402828,19.0439610400091,25.0058010926287,9.60346482047964,21.8859530121933,15.4843327125617,16.0931473103431,15.3052810334547,16.8789395976001,20.955241738609,15.6298738747517,22.8632207925738,28.1986674105527,15.089759505299,17.9650776159428,17.7710635405588,14.4669183402199,15.5706459566335,17.0643561595862,24.2822920961373,16.7188784127534,4.91549231119264,6.94839349209731,5.68326998791185,14.7059298500206,11.4917769390737,15.4853372856473,13.494449928357,19.8731874064878,15.8895126274,18.1376476905318,16.3646774853768,18.5656894363799,16.1268652915211,21.8342727225197,24.8070557210319,28.3627975605145,26.3460138349261,29.6596185460422,22.2907345477975,12.3485534855141,26.4335026387038,15.6025834331491,20.6889603019177,19.9723537799977,18.4280469690593,17.3447831176075,22.4601824283319,20.7345932462689,22.7773949541366,28.1635212578059,23.8768448360256,25.4664284212673,22.8107981929371,17.0775687644302,23.9913235360911,27.4814957091027,9.10405924574792,15.5377977149231,18.0332377076929,19.1432248174595,19.3952487167626,20.9004743273149,21.9430783821173,18.7464887934095,21.9798218977925,21.1009150306279,25.791378556582,14.5155241973002,15.7247196090562,13.9414509678609,16.2288097110802,19.2941727801933,18.0784354764808,15.8232875597946,19.1319567594542,13.7280706594041,23.0029130443767,20.0956111740992,12.793544597697,18.4382580901392,22.0658818631952,27.0168371963486,18.4753190166605,12.3169417650815,14.8298128562244,16.1257831486429,18.0711491182147,20.4357634079015,18.5674039891091,26.3430424608028,17.9704064281058,19.0459633097946,23.5993057613081,18.6804178775941,19.3407179689803,20.2508682014116,19.6028669121054,13.053736411649,13.277635371514,19.0396354950265,20.871576698413,26.7242645430223,9.50822683184717,37.1132262990428,10.0962630213202,14.055794794679,20.2497993868831,18.6395662402991,18.7150886229211,26.8922704249391,19.4309136803949,22.2114452012597,19.7643888973262,27.9549545286972,17.1747503102005,14.9575107080494,15.4742611385897,20.7862354945395,35.84118735179,9.95400608235424,12.09294227859,18.483297816078,13.5838870725155,24.2873766875703,28.1686839553361,13.8142817201452,17.8248689192361,21.4904995396355,23.1920938864997,34.0347292719017,27.9160476718106,19.0864759673189,14.3588138998857,19.0759961178117,23.9409315417069,19.7989387538298,17.1130981426206,15.22324745573,9.1521966144847,16.3110694565142,26.0223509704855,30.0092980353494,29.7094545120466,23.7632924216934,27.5750114647245,33.6488844477376,23.0269860937582,23.3635880533242,16.9162171989874,13.8279201535359,14.8155621895769,25.8064786096427,18.7271091977804,22.6490391474457,10.8786195196067,13.2953879707475,18.2423965421839,21.0027535963325,17.0821436533813,14.0290432317526,17.0648438498446,22.7906242655771,22.7097066296025,25.4893614667311,21.0766312099607,24.3433026045148,40.9583315602065,32.9309835936071,7.32800820289447,16.5963366108816,14.2294301793104,11.4726201122988,9.17034746691891,11.6579726588637,16.5473706490513,12.4996209450192,15.6240423194309,9.90494895386625,17.8578603879877,49.9297570592522,9.32535990334755,13.4551353885924,17.7991527479579,34.0150721768215,38.1468201180029,34.9768758103109,36.331623684946,40.2856135293109,40.0085734938749,48.2957426805466,51.4577610305893,53.2051484271022,52.4777290795245,34.0095575422817,12.2092274355736,8.25367480807176,7.21903850365537,23.375940877895,24.3987218086537,19.0477689237956,27.6535209011995,25.5801773058035,18.0720589637461,18.8733346967943,13.1765968091061,25.9498305338968,13.7016503954128,18.1294535373528,18.9006300064906,13.9599572999508,14.0474146785103,13.4617681055473,20.1347454313303,14.7639203158381,10.0732827394939,14.1001895899611,14.6729213839588,19.4874118957015,15.7795176739147,15.8646994073949,16.3668796891826,16.6780159764106,14.4483200937437,15.0901073108861,16.6681883296391,18.3752187401975,17.5752535004177,20.4806287251722,18.3097234992872,18.5192851645157,16.4834360321323,17.3694725758589,18.172070376427,16.1502983604997,18.598022815891,19.040380578835,18.0690010397435,17.0921507941187,21.2196448532416,13.6796249947678,16.2964936615034,23.0068331379673,20.6424931536063,20.7844457812439,21.2800142448238,19.3671051482457,14.4679958235856,12.2407183189594,17.778802241851,16.7599422157673,20.0852748672286,18.7502706251588,22.02744438394
|short_description=p1@Rmnd5a
}}
}}

Latest revision as of 16:50, 1 October 2015

Short description:p1@Rmnd5a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rmnd5a_5end
Coexpression cluster:NA
Association with transcript: 113bp_to_ENSMUST00000002292, NM_024288, uc009cgu.2_5end
EntrezGene:Rmnd5a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rmnd5a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G721.14
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I538.04
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I634.12
CD326+ enterocyte, pool1.CNhs13542.11848-124I399.81
CD326+ enterocyte, pool2.CNhs13197.11849-124I4102.68
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I729.04
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I820.32
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E926.34
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E717.04
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F216.85
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E69.25
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F19.57
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E419.69
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E820.19
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A117.65
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A318.83
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A525.88
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A214.35
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A417.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A614.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A314.03
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H214.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I913.84
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D116.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D214.45
GP2+ M cell, pool1.CNhs13228.11845-124H917.23
GP2+ M cell, pool2.CNhs13231.11846-124I134.03
GP2+ M cell, pool3.CNhs13240.11847-124I220.25
Ileum epithelium, pool1.CNhs13199.10252-104B926.60
Ileum epithelium, pool2.CNhs13232.10253-104C121.67
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C89.31
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I38.26
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G614.15
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F513.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F611.97
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F714.90
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G817.16
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H110.94
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H315.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G910.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H217.08
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H414.57
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D88.18
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D98.11
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B36.97
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.92
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.61
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C312.05
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.20
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A219.80
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I933.37
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A132.27
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C19.78
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E113.75
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C517.02
Mouse Granule cells, donor1.CNhs12131.11713-123C311.33
Mouse Granule cells, donor2.CNhs12357.11731-123E310.58
Mouse Granule cells, donor3.CNhs12108.11636-122C713.31
Mouse Meningeal cells, donor1.CNhs12132.11716-123C65.08
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C76.30
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E79.89
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.26
Mouse Microglia, donor1.CNhs12629.11718-123C85.39
Mouse Microglia, donor2.CNhs12634.11736-123E83.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D511.09
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F510.26
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D910.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F114.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D59.50
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D210.90
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F211.79
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D618.38
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D331.93
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F331.67
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D727.50
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.44
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F410.16
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D810.94
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E421.78
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E512.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I619.56
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D616.79
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F615.38
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E112.86
Mouse Schwann, donor1.CNhs12507.11728-123D95.98
Mouse Schwann, donor2.CNhs12573.11746-123F98.84
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G313.33
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F716.35
Mouse hepatocyte, donor1.CNhs13078.11714-123C410.88
Mouse hepatocyte, donor3.CNhs12615.11637-122C837.78
Mouse hepatocyte, donor6.CNhs13090.11822-124F433.14
Mouse hepatocyte, donor8.CNhs13091.11824-124F629.57
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A728.79
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I77.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E37.27
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.53
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G630.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H119.25
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I820.38
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G18.88
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G210.13
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G311.63
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B623.86
accessory axillary lymph node, adult.CNhs10475.1063-29H911.39
adrenal gland, adult.CNhs10508.49-24D718.70
adrenal gland, embryo E14.CNhs11038.406-44C512.49
adrenal gland, embryo E16.CNhs11004.1254-43D67.92
adrenal gland, embryo E17.CNhs11043.1263-45I113.61
adrenal gland, embryo E18.CNhs11026.1262-18F514.92
adrenal gland, neonate N00.CNhs11191.1311-23C117.17
adrenal gland, neonate N25.CNhs11223.1377-27I322.75
amnion, adult pregnant day17.5.CNhs10488.583-22A814.09
aorta, adult.CNhs10498.46-23H118.07
bone (os femoris), adult.CNhs10483.56-12G222.12
bone (os femoris), neonate N02.CNhs11227.1985-43F518.12
bone (os femoris), neonate N16.CNhs11225.1525-43A627.16
bone (os femoris), neonate N20.CNhs11195.1350-25C320.85
cecum, adult.CNhs10467.37-13H424.23
cerebellum, adult.CNhs10494.15-8B241.28
cerebellum, neonate N30.CNhs11135.1395-42I245.66
colon, adult.CNhs10468.36-18H716.09
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C712.46
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D113.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D49.40
corpora quadrigemina, adult.CNhs10501.16-22A421.87
corpus striatum, adult.CNhs10487.19-21D825.16
corpus striatum, neonate N00.CNhs11226.630-43F113.95
cortex, adult.CNhs10473.12-14D516.34
cortex, neonate N30.CNhs11107.1392-42F227.87
diencephalon, adult.CNhs10482.20-12F220.78
diencephalon, neonate N30.CNhs11201.1388-42B222.23
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B119.04
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A225.01
epididymis, adult.CNhs10490.58-23B29.60
eyeball, adult.CNhs10484.31-12G421.89
eyeball, embryo E12.CNhs11016.345-16C615.48
eyeball, embryo E14.CNhs10521.399-16E216.09
eyeball, embryo E15.CNhs10593.426-16C915.31
eyeball, embryo E17.CNhs11023.1261-18D416.88
eyeball, neonate N00.CNhs11207.633-15C620.96
eyeball, neonate N01.CNhs11140.1532-43E715.63
eyeball, neonate N02.CNhs11205.1551-44G822.86
eyeball, neonate N16.CNhs11188.777-19A228.20
forelimb, embryo E11.CNhs10596.335-25E215.09
forelimb, embryo E12.CNhs10600.359-14H217.97
forelimb, embryo E13.CNhs10589.384-1E217.77
forelimb, embryo E14.CNhs10577.413-26A814.47
forelimb, embryo E15.CNhs11007.437-20E715.57
forelimb, embryo E17.CNhs10598.1517-43C417.06
forelimb, embryo E18.CNhs11008.1520-43B524.28
gonad, embryo E13.CNhs11044.1564-45I616.72
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.92
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D26.95
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D55.68
heart, embryo E11.CNhs10586.331-24E914.71
heart, embryo E12.CNhs11015.353-12F511.49
heart, embryo E13.CNhs11013.376-3I915.49
heart, embryo E14.CNhs10597.403-26D413.49
heart, embryo E15.CNhs11017.431-16C819.87
heart, embryo E16.CNhs11021.457-17C615.89
heart, embryo E17.CNhs11025.479-18E518.14
heart, embryo E18.CNhs11030.1283-20G316.36
heart, neonate N00.CNhs11213.639-21E318.57
heart, neonate N03.CNhs11221.1349-25I216.13
heart, neonate N10.CNhs11118.749-24G121.83
heart, neonate N16.CNhs11209.782-15G124.81
heart, neonate N20.CNhs11127.821-26I628.36
heart, neonate N25.CNhs11196.1351-25D326.35
heart, neonate N30.CNhs11202.1390-42D229.66
hippocampus, adult.CNhs10478.13-16E822.29
hippocampus, neonate N00.CNhs11228.627-43G112.35
intestinal mucosa, adult.CNhs10506.860-29I326.43
intestine, adult.CNhs10496.178-9A315.60
intestine, embryo E12.CNhs11019.1251-16I520.69
intestine, embryo E13.CNhs11010.381-16D519.97
intestine, embryo E15.CNhs10602.976-16D818.43
intestine, embryo E16.CNhs10585.463-22H417.34
intestine, embryo E17.CNhs10582.482-18D322.46
intestine, embryo E18.CNhs10526.1289-20F720.73
intestine, neonate N00.CNhs11126.644-26D122.78
intestine, neonate N01.CNhs11192.1322-23E928.16
intestine, neonate N06.CNhs11102.688-20B823.88
intestine, neonate N07.CNhs11095.720-20F225.47
intestine, neonate N10.CNhs11098.755-23A522.81
intestine, neonate N20.CNhs11187.827-18D117.08
intestine, neonate N25.CNhs11121.1352-25E323.99
intestine, neonate N30.CNhs11131.1384-42G127.48
kidney, embryo E14.CNhs10606.411-4I99.10
kidney, embryo E15.CNhs10997.434-16F815.54
kidney, embryo E16.CNhs10584.464-22A518.03
kidney, embryo E17.CNhs11028.483-18I219.14
kidney, embryo E18.CNhs11001.1288-20C719.40
kidney, neonate N00.CNhs11214.646-21G720.90
kidney, neonate N10.CNhs11206.758-6D521.94
kidney, neonate N20.CNhs11113.832-19I118.75
kidney, neonate N25.CNhs11122.1353-25F321.98
kidney, neonate N30.CNhs11203.1385-42H121.10
liver, adult pregnant day01.CNhs10466.508-5B225.79
liver, embryo E12.CNhs10601.355-15F814.52
liver, embryo E13.CNhs10524.378-3H615.72
liver, embryo E14.CNhs10594.409-16E113.94
liver, embryo E15.CNhs10520.433-16D716.23
liver, embryo E16.CNhs10523.462-17F519.29
liver, embryo E17.CNhs10510.481-18A318.08
liver, embryo E18.CNhs10579.499-43G415.82
liver, neonate N00.CNhs11117.641-24F419.13
liver, neonate N03.CNhs11123.1345-25G213.73
liver, neonate N06.CNhs11101.684-20A823.00
liver, neonate N07.CNhs11103.716-20H220.10
liver, neonate N10.CNhs11115.751-24B912.79
liver, neonate N20.CNhs11220.823-25A318.44
liver, neonate N25.CNhs11198.1368-26H122.07
liver, neonate N30.CNhs11106.1382-42D127.02
lung, adult.CNhs10474.28-22B118.48
lung, embryo E12.CNhs10522.354-16G212.32
lung, embryo E14.CNhs10604.404-26F814.83
lung, embryo E15.CNhs11020.432-17C516.13
lung, embryo E16.CNhs10998.458-17B618.07
lung, embryo E17.CNhs10605.480-44A620.44
lung, embryo E18.CNhs10583.1287-20I618.57
lung, neonate N00.CNhs11224.640-42C626.34
lung, neonate N06.CNhs11212.683-20E517.97
lung, neonate N07.CNhs11111.715-19A319.05
lung, neonate N10.CNhs11219.750-23E623.60
lung, neonate N20.CNhs11109.822-18A418.68
lung, neonate N25.CNhs11119.1359-25C719.34
lung, neonate N30.CNhs11133.1394-42H220.25
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A119.60
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A113.05
mammary gland, adult lactating day02.CNhs10480.595-22B613.28
mammary gland, adult pregnant day19.CNhs10476.588-5H219.04
medulla oblongata, adult.CNhs10477.17-12C220.87
medulla oblongata, neonate N30.CNhs11200.1396-42A326.72
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C79.51
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C237.11
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E110.10
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E214.06
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E320.25
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D718.64
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D818.72
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D926.89
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D419.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D522.21
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D619.76
olfactory brain, adult.CNhs10489.18-22I927.95
ovary, adult.CNhs10507.91-2I717.17
ovary, embryo E18.CNhs11040.505-44H714.96
ovary, neonate N00.CNhs11217.1299-22I415.47
oviduct, adult pregnant day01.CNhs10500.988-6G620.79
pancreas, adult.CNhs10486.34-16E435.84
pancreas, embryo E14.CNhs11012.405-44F49.95
pancreas, embryo E15.CNhs11042.1556-45F212.09
pancreas, embryo E16.CNhs11003.460-26E518.48
pancreas, embryo E17.CNhs10599.1558-45G313.58
pancreas, embryo E18.CNhs10580.1535-43I724.29
pancreas, neonate N00.CNhs11105.645-26G928.17
pancreas, neonate N01.CNhs11138.1531-43D713.81
pancreas, neonate N02.CNhs11139.1539-43D817.82
pancreas, neonate N16.CNhs11136.787-43B621.49
pancreas, neonate N25.CNhs11094.1555-45E223.19
pancreas, neonate N30.CNhs11182.1548-44H534.03
pituitary gland, adult.CNhs10493.21-1G827.92
pituitary gland, embryo E12.CNhs11018.346-16E619.09
pituitary gland, embryo E13.CNhs11009.370-44C714.36
pituitary gland, embryo E14.CNhs11037.398-44A519.08
pituitary gland, embryo E15.CNhs10592.427-16B923.94
pituitary gland, embryo E16.CNhs11036.449-43F619.80
pituitary gland, embryo E17.CNhs11039.1265-44F517.11
pituitary gland, neonate N00.CNhs11190.1308-22E915.22
placenta, adult pregnant day10.CNhs10472.539-13I79.15
placenta, adult pregnant day17.CNhs10464.577-18G316.31
prostate, adult.CNhs10470.859-1F826.02
skin, adult.CNhs10492.30-1C330.01
skin, neonate N00.CNhs11124.650-25G429.71
skin, neonate N03.CNhs11215.662-22H323.76
skin, neonate N06.CNhs11097.693-20I527.58
skin, neonate N10.CNhs11108.762-6C433.65
small intestine, neonate N16.CNhs11114.790-21I123.03
spinal cord, adult.CNhs10505.24-13C923.36
spleen, adult.CNhs10465.25-2G216.92
spleen, embryo E16.CNhs11035.461-43C113.83
spleen, embryo E18.CNhs11011.1271-21F214.82
spleen, neonate N10.CNhs11116.752-24D125.81
spleen, neonate N20.CNhs11112.824-19H118.73
spleen, neonate N25.CNhs11099.1354-25G322.65
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C610.88
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C913.30
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D318.24
stomach, adult.CNhs10503.33-1H621.00
stomach, embryo E12.CNhs10588.356-43E317.08
stomach, embryo E15.CNhs10603.1252-16G814.03
stomach, embryo E16.CNhs11022.459-17D417.06
stomach, embryo E17.CNhs11006.1035-18D522.79
stomach, embryo E18.CNhs10999.1286-20C622.71
stomach, neonate N03.CNhs11193.1340-24B825.49
stomach, neonate N07.CNhs11210.718-18A921.08
stomach, neonate N25.CNhs11104.1355-25E424.34
stomach, neonate N30.CNhs11134.1386-42I140.96
submandibular gland, adult.CNhs10469.59-29C132.93
testis, adult.CNhs10504.57-7G57.33
testis, embryo E13.CNhs11031.389-23F516.60
testis, embryo E15.CNhs11034.443-27C514.23
testis, embryo E16.CNhs11033.470-26G511.47
testis, embryo E17.CNhs11029.486-18I59.17
testis, embryo E18.CNhs11027.503-18G511.66
testis, neonate N00.CNhs11189.1300-22B716.55
testis, neonate N07.CNhs11222.726-26I412.50
testis, neonate N10.CNhs11204.763-44D915.62
testis, neonate N20.CNhs11110.839-18H39.90
testis, neonate N30.CNhs11130.1391-42E217.86
thymus, adult.CNhs10471.38-12B549.93
thymus, embryo E14.CNhs11041.402-44I49.33
thymus, embryo E15.CNhs11005.430-45I213.46
thymus, embryo E16.CNhs11002.456-26C517.80
thymus, embryo E17.CNhs10581.478-18C134.02
thymus, embryo E18.CNhs10595.1273-19G438.15
thymus, neonate N02.CNhs11181.1541-43F834.98
thymus, neonate N03.CNhs11137.2104-43C736.33
thymus, neonate N06.CNhs11197.681-26C440.29
thymus, neonate N07.CNhs11211.713-19D340.01
thymus, neonate N10.CNhs11194.748-24E448.30
thymus, neonate N20.CNhs11186.820-7A251.46
thymus, neonate N25.CNhs11125.1362-25G753.21
thymus, neonate N30.CNhs11132.1393-42G252.48
tongue, adult.CNhs10499.32-1B434.01
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H312.21
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F78.25
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G57.22
urinary bladder, adult.CNhs10481.879-12E423.38
uterus, adult pregnant day19.CNhs10497.590-15F524.40
uterus, adult.CNhs10509.92-27E519.05
vagina, adult.CNhs10502.89-27D527.65
vesicular gland, adult.CNhs10491.51-27F825.58
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A118.07
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A218.87
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A313.18
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D725.95
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A413.70
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A518.13
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A618.90
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A713.96
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A814.05
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A913.46
whole body, embryo E11.CNhs11014.324-5I820.13
whole body, embryo E12.CNhs10587.857-27C914.76
whole body, embryo E13.CNhs10512.372-23H210.07
whole body, embryo E14.5.CNhs10578.420-27D214.10
whole body, embryo E14.CNhs10519.395-14B114.67
whole body, embryo E16.CNhs10514.453-14F219.49
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G515.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G515.86
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G516.37
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G516.68
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G514.45
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G515.09
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G516.67
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G518.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G517.58
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G520.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G518.31
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G518.52
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G516.48
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G517.37
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G518.17
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G516.15
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G518.60
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G519.04
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G518.07
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G517.09
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G521.22
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G513.68
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G516.30
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G523.01
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G520.64
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G520.78
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G521.28
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G519.37
whole body, embryo E17.5.CNhs10513.490-9F914.47
whole body, embryo E17.CNhs10517.475-3I512.24
whole body, embryo E18.CNhs10516.493-3B317.78
whole body, neonate N00.CNhs10525.657-19C216.76
whole body, neonate N01.CNhs10576.659-23C620.09
whole body, neonate N06.CNhs10515.692-21D118.75
whole body, neonate N10.CNhs10518.761-6B422.03





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
subdivision of digestive tract1.57e-08114
digestive system3.52e-08116
digestive tract3.52e-08116
primitive gut3.52e-08116
endoderm-derived structure1.20e-07118
endoderm1.20e-07118
presumptive endoderm1.20e-07118
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr6:71390459..71390517,-&oldid=4312517"