FFCP PHASE1:Hg19::chr11:44331735..44331747,-: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr11:44331735..44331747,- to FFCP PHASE1:Hg19::chr11:44331735..44331747,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=60529 | |EntrezGene=60529 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=450 | |HGNC=450 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H161 | |UniProt=Q9H161 | ||
|association_with_transcript=-19bp_to_ENST00000329255,NM_021926,uc001myb.2_5end | |||
|cluster_id=chr11:44331735..44331747,- | |||
|coexpression_cluster_id=C3152 | |||
|description=CAGE_peak_3_at_ALX4_5end | |||
|id=chr11:44331735..44331747,- | |||
|ontology_enrichment_celltype=CL:0000708!3.72e-11!3;CL:0000197!2.96e-09!6;CL:0000098!2.96e-09!6;CL:0002167!2.96e-09!6;CL:0002549!3.60e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0002549;1.42e-36;2!CL:0000333;1.81e-15;5!CL:0002367;2.72e-10;2!CL:0000708;2.79e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002549,9.84e-37,2;CL:0002367,3.27e-10,2;CL:0000708,3.35e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0010115;3.25e-19;1 | |||
|ontology_enrichment_disease=DOID:171!2.04e-08!10;DOID:3095!2.18e-08!22;DOID:2994!2.18e-08!22 | |||
|ontology_enrichment_disease_v019=DOID:169;4.66e-13;6!DOID:3193;2.72e-10;2!DOID:962;2.72e-10;2!DOID:171;3.31e-08;10!DOID:1192;2.79e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:169,4.01e-13,6;DOID:3193,2.27e-10,2;DOID:962,2.27e-10,2;DOID:171,3.03e-08,10;DOID:1192,2.47e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0003210!3.72e-11!3;UBERON:0000473!1.32e-09!8;UBERON:0003947!3.60e-08!2;UBERON:0005629!3.60e-08!2;UBERON:0005358!3.60e-08!2;UBERON:0001886!3.60e-08!2;UBERON:0004086!3.60e-08!2;UBERON:0005282!3.60e-08!2;UBERON:0005281!3.60e-08!2;UBERON:0002200!1.76e-07!11;UBERON:0006876!1.76e-07!11;UBERON:0003135!6.76e-07!11;UBERON:0005284!8.91e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0005629;1.42e-36;2!UBERON:0005358;1.42e-36;2!UBERON:0001886;1.42e-36;2!UBERON:0004086;1.42e-36;2!UBERON:0005282;1.42e-36;2!UBERON:0005281;1.42e-36;2!UBERON:0002363;3.25e-19;1!UBERON:0000013;1.81e-15;5!UBERON:0002410;1.81e-15;5!UBERON:0005284;2.70e-15;5!UBERON:0006876;2.74e-15;11!UBERON:0001905;2.72e-10;2!UBERON:0002360;2.72e-10;2!UBERON:0003714;2.72e-10;2!UBERON:0002757;2.72e-10;2!UBERON:0010134;2.72e-10;2!UBERON:0000094;2.72e-10;2!UBERON:0005408;2.72e-10;2!UBERON:0005969;2.72e-10;2!UBERON:0001899;2.72e-10;2!UBERON:0010743;2.72e-10;2!UBERON:0003956;2.72e-10;2!UBERON:0000010;5.10e-09;8!UBERON:0003210;2.79e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005629,9.84e-37,2;UBERON:0005358,9.84e-37,2;UBERON:0001886,9.84e-37,2;UBERON:0004086,9.84e-37,2;UBERON:0005282,9.84e-37,2;UBERON:0005281,9.84e-37,2;UBERON:0002363,2.71e-19,1;UBERON:0007645,2.71e-19,1;UBERON:0007647,2.71e-19,1;UBERON:0010115,2.71e-19,1;UBERON:0000013,1.51e-15,5;UBERON:0002410,1.51e-15,5;UBERON:0005284,2.34e-15,5;UBERON:0006876,2.74e-15,11;UBERON:0003714,2.27e-10,2;UBERON:0002360,2.49e-10,2;UBERON:0000094,2.49e-10,2;UBERON:0010743,2.49e-10,2;UBERON:0001905,2.72e-10,2;UBERON:0002757,2.72e-10,2;UBERON:0010134,2.72e-10,2;UBERON:0005408,2.72e-10,2;UBERON:0001899,2.72e-10,2;UBERON:0005969,3.27e-10,2;UBERON:0003956,3.27e-10,2;UBERON:0000010,4.61e-09,8;UBERON:0003210,3.35e-07,3;UBERON:0001016,6.61e-07,89 | |||
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| ||
|short_description=p3@ALX4 | |||
}} | }} |
Latest revision as of 00:21, 18 September 2015
Short description: | p3@ALX4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ALX4_5end |
Coexpression cluster: | C3152_anaplastic_Fibroblast_dura_acute_Meningeal_neuroblastoma_rhabdomyosarcoma |
Association with transcript: | -19bp_to_ENST00000329255, NM_021926, uc001myb.2_5end |
EntrezGene: | ALX4 |
HGNC: | 450 |
UniProt: | Q9H161 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of choroid plexus | 9.84e-37 | 2 |
trabecular meshwork cell | 3.27e-10 | 2 |
leptomeningeal cell | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
vascular plexus | 9.84e-37 | 2 |
ventricle of nervous system | 9.84e-37 | 2 |
choroid plexus | 9.84e-37 | 2 |
brain ventricle | 9.84e-37 | 2 |
ventricular system of brain | 9.84e-37 | 2 |
ventricular system of central nervous system | 9.84e-37 | 2 |
dura mater | 2.71e-19 | 1 |
future meninx | 2.71e-19 | 1 |
ectomeninx | 2.71e-19 | 1 |
future dura mater | 2.71e-19 | 1 |
sympathetic nervous system | 1.51e-15 | 5 |
autonomic nervous system | 1.51e-15 | 5 |
brain vasculature | 2.34e-15 | 5 |
vasculature of organ | 2.74e-15 | 11 |
neural tissue | 2.27e-10 | 2 |
meninx | 2.49e-10 | 2 |
membrane organ | 2.49e-10 | 2 |
meningeal cluster | 2.49e-10 | 2 |
pineal body | 2.72e-10 | 2 |
regional part of epithalamus | 2.72e-10 | 2 |
secretory circumventricular organ | 2.72e-10 | 2 |
circumventricular organ | 2.72e-10 | 2 |
epithalamus | 2.72e-10 | 2 |
reticulum trabeculare | 3.27e-10 | 2 |
aqueous drainage system | 3.27e-10 | 2 |
peripheral nervous system | 4.61e-09 | 8 |
blood-cerebrospinal fluid barrier | 3.35e-07 | 3 |
nervous system | 6.61e-07 | 89 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 4.01e-13 | 6 |
peripheral nerve sheath neoplasm | 2.27e-10 | 2 |
neurofibroma | 2.27e-10 | 2 |
neuroectodermal tumor | 3.03e-08 | 10 |
peripheral nervous system neoplasm | 2.47e-07 | 3 |