FFCP PHASE1:Hg19::chr11:46848363..46848374,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:46848363..46848374,- to FFCP PHASE1:Hg19::chr11:46848363..46848374,-: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9793 | |EntrezGene=9793 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28959 | |HGNC=28959 | ||
|TSSclassifier=strong | |||
|UniProt=E9PQH5 | |UniProt=E9PQH5 | ||
|association_with_transcript=29bp_to_ENST00000526496_5end | |||
|cluster_id=chr11:46848363..46848374,- | |||
|description=CAGE_peak_6_at_CKAP5_5end | |||
|id=chr11:46848363..46848374,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002174;1.78e-29;1!CL:0000501;1.78e-29;1!CL:0000174;8.99e-11;3!CL:0000346;8.99e-11;3!CL:1000428;8.99e-11;3!CL:0002559;5.70e-07;5!CL:0002188;5.70e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002174,2.37e-29,1;CL:0000501,2.37e-29,1;CL:0000346,7.42e-11,3;CL:1000428,7.42e-11,3;CL:0000174,9.90e-11,3;CL:0002559,5.08e-07,5;CL:0002188,5.38e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.01e-22!115;UBERON:0001049!3.91e-13!57;UBERON:0005068!3.91e-13!57;UBERON:0006241!3.91e-13!57;UBERON:0007135!3.91e-13!57;UBERON:0002616!1.82e-12!59;UBERON:0001017!4.60e-12!82;UBERON:0005743!7.48e-12!86;UBERON:0000955!1.26e-11!69;UBERON:0006238!1.26e-11!69;UBERON:0000073!3.40e-11!94;UBERON:0001016!3.40e-11!94;UBERON:0002780!1.53e-10!41;UBERON:0001890!1.53e-10!41;UBERON:0006240!1.53e-10!41;UBERON:0003080!3.93e-10!42;UBERON:0000924!4.61e-10!173;UBERON:0006601!4.61e-10!173;UBERON:0002346!5.09e-10!90;UBERON:0000033!5.17e-10!123;UBERON:0004121!1.15e-09!169;UBERON:0003075!1.23e-09!86;UBERON:0007284!1.23e-09!86;UBERON:0000153!1.54e-09!129;UBERON:0007811!1.54e-09!129;UBERON:0002020!7.05e-08!34;UBERON:0003528!7.05e-08!34;UBERON:0001893!8.64e-08!34;UBERON:0002298!9.35e-08!8;UBERON:0002791!5.08e-07!33;UBERON:0003056!6.91e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002426;1.78e-29;1!UBERON:0003831;1.78e-29;1!UBERON:0003898;1.78e-29;1!UBERON:0004830;1.78e-29;1!UBERON:0003830;1.78e-29;1!UBERON:0005175;1.78e-29;1!UBERON:0001774;1.78e-29;1!UBERON:0001103;1.78e-29;1!UBERON:0005090;1.78e-15;2!UBERON:0001630;1.78e-15;2!UBERON:0000988;8.99e-11;3!UBERON:0000412;8.99e-11;3!UBERON:0002114;8.99e-11;2!UBERON:0001992;8.99e-11;3!UBERON:0001134;4.58e-08;16!UBERON:0002036;4.58e-08;16!UBERON:0002108;5.70e-07;4!UBERON:0002073;5.70e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002426,7.48e-30,1;UBERON:0003831,7.48e-30,1;UBERON:0003898,7.48e-30,1;UBERON:0004830,7.48e-30,1;UBERON:0003830,7.48e-30,1;UBERON:0005175,7.48e-30,1;UBERON:0001774,7.48e-30,1;UBERON:0001103,7.48e-30,1;UBERON:0010084,7.48e-30,1;UBERON:0005090,1.15e-15,2;UBERON:0001630,1.15e-15,2;UBERON:0000412,7.42e-11,3;UBERON:0001992,7.42e-11,3;UBERON:0000988,8.99e-11,3;UBERON:0002114,1.20e-10,2;UBERON:0002073,5.08e-07,5;UBERON:0005086,5.08e-07,5;UBERON:0002108,6.77e-07,4 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.140954404095971,0,0,0,0,0,0.522371256399677,0,0,0.218441372130172,0,0.247532705920093,0,0,0,0.730310090387373,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0.35576626268671,0.33472061276467,0,0,0.24406205754817,0,0,0.267899184852239,0,0,0,0,0.183201743930407,0,0,0,0,0.379891534993739,0.529636723252875,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0,0.427114777637135,0,0,0.103052529238439,0.772921620136887,0.18611685633159,0,0,0.252433774244115,0.0920498986422993,0.484938170456436,0,0.201504196455281,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0.577465791044295,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0,0.179117045405697,0.290633938513962,0.383382679165211,0.985326475791887,0,0,0.144119953416961,0,0,0,0,0,0,0,0.857479297891735,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0.301439377059586,0.871533458600294,0.199945982364114,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0.347534457872331,0,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0.511707249066704,0,0,0,0,0.0821271560138091,0,0,0,0.200506470303285,0,0,0,0.131124414959424,0,0,0,0,0,0,0.170093705276516,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.644521469209642,0,0,0,0,0.192190067365106,0,0,0,0.31481234683064,0,0.308033580176089,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0.556608588971108,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.241192877250816,0,0.110579259931225,0,0.658156191461918,0.10893846351899,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.269604531922708,1.60515529459758,0.937057782901357,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0.0969890164884194,0.176512253383001,0,0,0,0.633107959558787,0,0,0,0,0,0.343609788497747,0,0,0,0,0.135904206073614,0.313808538937,0,0,0,0.136905378891993,0,1.28929632425987,0,0,0.916641696046735,0,0.998395002494955,0.858452096273142,0.669514372325618,0.403100834920358,0,0,0,0.0824158583811665,0,0,0,0,0.136203406111576,0.160753148465019,0,0,0,0,0.485996453264197,0,0.0788057072991982,0,0,0,0,0.714695326373367,0.662091970365432,0,0.542999601753713,0,0,0,0,0.511164065356265,0,0,0,0.646414781807753,0.52893040697076,0.171086837884329,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0.327872630709804,0,0.886068179966986,0.366078794705889,0.3755727921195,0.573409195690071,0.332787154610557,0.496771223531068,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0.889811221596536,0,0,0.15543720058278,0,0,0.449803112163605,0,0,0,0,0,0,0.406870733204662,0,0.214821114084977,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0.179088841081487,0,0.219284049578707,0.353378291891762,0.38582807654183,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.642292250964595,0,0,0.615349092722265,0,0.345786262321089,0,0,0,0,0.366857197043358,0,0,0,0,0.300841313397029,0,0,0,0.163771917510097,0,0.742913430802341,0,0.206686796501184,0.253663240775627,0,0,0,0.175871244359621,0,0.535701835878287,0,0,0.227662191351298,0,0,0,1.35939465953663,0.789273282754189,0,0,0,0,0,0,0,0,0.357382720883282,0,0,0,0,0.414432328326074,0.3414369541879,0.691259661814092,0,0.354996002191696,0.255640214277473,0.423387050190929,0,0,0,0.111855431797792,0,0,0.647428837187895,1.23195368227496,0,0,0,0,0,0.11294608203896,0,0,0.154348316215889,0,0,0,0,0.196308467114945,0,0,0,0.0939839179798536,0,0.199882311849858,0,0,0,0,0.458729283404541,0.143339583151451,0,0.0679914901909147,0,1.0580536810308,0.743990036333503,0,0,0,0,0,0,0.26721740526556,0,0,0.530450887527676,0.267964130156178,0.829169439458779,0.103432995861895,0.213233981900981,0,0,0,0,0,0.202117188958219,0.217716747896961,0.342233301085281,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0.244482888365733,0,0,0,0 | |phase1_expression=0.181678379270557,0.642301571672949,0.140954404095971,0,0,0,0,0,0.522371256399677,0,0,0.218441372130172,0,0.247532705920093,0,0,0,0.730310090387373,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0.35576626268671,0.33472061276467,0,0,0.24406205754817,0,0,0.267899184852239,0,0,0,0,0.183201743930407,0,0,0,0,0.379891534993739,0.529636723252875,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0,0.427114777637135,0,0,0.103052529238439,0.772921620136887,0.18611685633159,0,0,0.252433774244115,0.0920498986422993,0.484938170456436,0,0.201504196455281,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0.577465791044295,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0,0.179117045405697,0.290633938513962,0.383382679165211,0.985326475791887,0,0,0.144119953416961,0,0,0,0,0,0,0,0.857479297891735,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0.301439377059586,0.871533458600294,0.199945982364114,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0.157702415033935,0,0,0,0,0,0,0.347534457872331,0,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0.511707249066704,0,0,0,0,0.0821271560138091,0,0,0,0.200506470303285,0,0,0,0.131124414959424,0,0,0,0,0,0,0.170093705276516,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.644521469209642,0,0,0,0,0.192190067365106,0,0,0,0.31481234683064,0,0.308033580176089,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0.556608588971108,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.241192877250816,0,0.110579259931225,0,0.658156191461918,0.10893846351899,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.269604531922708,1.60515529459758,0.937057782901357,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0.0969890164884194,0.176512253383001,0,0,0,0.633107959558787,0,0,0,0,0,0.343609788497747,0,0,0,0,0.135904206073614,0.313808538937,0,0,0,0.136905378891993,0,1.28929632425987,0,0,0.916641696046735,0,0.998395002494955,0.858452096273142,0.669514372325618,0.403100834920358,0,0,0,0.0824158583811665,0,0,0,0,0.136203406111576,0.160753148465019,0,0,0,0,0.485996453264197,0,0.0788057072991982,0,0,0,0,0.714695326373367,0.662091970365432,0,0.542999601753713,0,0,0,0,0.511164065356265,0,0,0,0.646414781807753,0.52893040697076,0.171086837884329,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0.327872630709804,0,0.886068179966986,0.366078794705889,0.3755727921195,0.573409195690071,0.332787154610557,0.496771223531068,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0.889811221596536,0,0,0.15543720058278,0,0,0.449803112163605,0,0,0,0,0,0,0.406870733204662,0,0.214821114084977,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0.179088841081487,0,0.219284049578707,0.353378291891762,0.38582807654183,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.642292250964595,0,0,0.615349092722265,0,0.345786262321089,0,0,0,0,0.366857197043358,0,0,0,0,0.300841313397029,0,0,0,0.163771917510097,0,0.742913430802341,0,0.206686796501184,0.253663240775627,0,0,0,0.175871244359621,0,0.535701835878287,0,0,0.227662191351298,0,0,0,1.35939465953663,0.789273282754189,0,0,0,0,0,0,0,0,0.357382720883282,0,0,0,0,0.414432328326074,0.3414369541879,0.691259661814092,0,0.354996002191696,0.255640214277473,0.423387050190929,0,0,0,0.111855431797792,0,0,0.647428837187895,1.23195368227496,0,0,0,0,0,0.11294608203896,0,0,0.154348316215889,0,0,0,0,0.196308467114945,0,0,0,0.0939839179798536,0,0.199882311849858,0,0,0,0,0.458729283404541,0.143339583151451,0,0.0679914901909147,0,1.0580536810308,0.743990036333503,0,0,0,0,0,0,0.26721740526556,0,0,0.530450887527676,0.267964130156178,0.829169439458779,0.103432995861895,0.213233981900981,0,0,0,0,0,0.202117188958219,0.217716747896961,0.342233301085281,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0.244482888365733,0,0,0,0 | ||
|short_description=p6@CKAP5 | |||
}} | }} |
Latest revision as of 03:41, 18 September 2015
Short description: | p6@CKAP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CKAP5_5end |
Coexpression cluster: | NA |
Association with transcript: | 29bp_to_ENST00000526496_5end |
EntrezGene: | CKAP5 |
HGNC: | 28959 |
UniProt: | E9PQH5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
follicular cell of ovary | 2.37e-29 | 1 |
granulosa cell | 2.37e-29 | 1 |
hair follicle dermal papilla cell | 7.42e-11 | 3 |
stem cell of epidermis | 7.42e-11 | 3 |
steroid hormone secreting cell | 9.90e-11 | 3 |
hair follicle cell | 5.08e-07 | 5 |
glomerular endothelial cell | 5.38e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
chest muscle | 7.48e-30 | 1 |
respiratory system muscle | 7.48e-30 | 1 |
skeletal muscle of trunk | 7.48e-30 | 1 |
respiratory system skeletal muscle | 7.48e-30 | 1 |
thoracic segment muscle | 7.48e-30 | 1 |
chest organ | 7.48e-30 | 1 |
muscle of trunk | 7.48e-30 | 1 |
diaphragm | 7.48e-30 | 1 |
future diaphragm | 7.48e-30 | 1 |
muscle structure | 1.15e-15 | 2 |
muscle organ | 1.15e-15 | 2 |
dermal papilla | 7.42e-11 | 3 |
papillary layer of dermis | 7.42e-11 | 3 |
pons | 8.99e-11 | 3 |
duodenum | 1.20e-10 | 2 |
hair follicle | 5.08e-07 | 5 |
hair follicle placode | 5.08e-07 | 5 |
small intestine | 6.77e-07 | 4 |