FFCP PHASE1:Hg19::chr11:76493294..76493332,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:76493294..76493332,+ to FFCP PHASE1:Hg19::chr11:76493294..76493332,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=25987 | |EntrezGene=25987 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28850 | |HGNC=28850 | ||
|TSSclassifier=strong | |||
|UniProt=E9PLG7 | |UniProt=E9PLG7 | ||
|association_with_transcript=0bp_to_ENST00000533752_5end | |||
|cluster_id=chr11:76493294..76493332,+ | |||
|description=CAGE_peak_5_at_TSKU_5end | |||
|id=chr11:76493294..76493332,+ | |||
|ontology_enrichment_celltype=CL:0000066!5.97e-18!254;CL:0002076!5.96e-17!43;CL:0002159!2.14e-13!13;CL:0000223!2.70e-13!59;CL:0002251!5.55e-13!21;CL:0000622!3.70e-08!5;CL:0002368!4.12e-08!13;CL:0000244!2.89e-07!4;CL:0000731!2.89e-07!4;CL:0000362!5.33e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002159;3.80e-16;14!CL:0002621;4.01e-16;3!CL:0000317;8.21e-11;2!CL:1000448;8.21e-11;2!CL:0002308;8.21e-11;2!CL:0002140;8.21e-11;2!CL:0002076;1.54e-09;42!CL:0000622;2.58e-09;5!CL:0000362;5.57e-09;9!CL:0002251;1.38e-08;20!CL:0000154;7.78e-08;6!CL:0002166;2.84e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,3.01e-16,14;CL:0002621,3.82e-16,3;CL:0000066,2.66e-12,253;CL:0002076,3.04e-12,42;CL:0000317,5.81e-11,2;CL:1000448,5.81e-11,2;CL:0002308,5.81e-11,2;CL:0002140,5.81e-11,2;CL:0000223,5.49e-10,58;CL:0000622,2.30e-09,5;CL:0000362,5.58e-09,9;CL:0002251,1.36e-08,20;CL:0000154,7.08e-08,6;CL:0002166,2.67e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!3.63e-13!14;DOID:305!4.63e-11!106 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.10e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,8.61e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.97e-20!169;UBERON:0000925!1.97e-20!169;UBERON:0006595!1.97e-20!169;UBERON:0001004!6.50e-18!72;UBERON:0001007!2.76e-15!155;UBERON:0001555!2.76e-15!155;UBERON:0007026!2.76e-15!155;UBERON:0004921!4.39e-13!129;UBERON:0004185!4.39e-13!129;UBERON:0000065!1.11e-12!53;UBERON:0000161!1.47e-11!35;UBERON:0000166!6.25e-11!21;UBERON:0000072!1.80e-10!46;UBERON:0000063!1.46e-09!97;UBERON:0000077!3.25e-09!130;UBERON:0000165!1.69e-08!28;UBERON:0000930!1.69e-08!28;UBERON:0008947!2.91e-08!38;UBERON:0003258!2.91e-08!38;UBERON:0001041!3.83e-08!98;UBERON:0000365!6.65e-08!5;UBERON:0000464!1.85e-07!104;UBERON:0003729!2.91e-07!5;UBERON:0003102!4.86e-07!95;UBERON:0001444!7.09e-07!48;UBERON:0001557!8.19e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;4.01e-16;3!UBERON:0002419;8.21e-11;2!UBERON:0007771;8.21e-11;2!UBERON:0003297;8.21e-11;2!UBERON:0001821;8.21e-11;2!UBERON:0003487;8.21e-11;2!UBERON:0001820;8.21e-11;2!UBERON:0000486;1.28e-10;12!UBERON:0004807;8.92e-08;22!UBERON:0005911;2.02e-07;36!UBERON:0003929;3.69e-07;7!UBERON:0010371;3.96e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,3.82e-16,3;UBERON:0002419,5.81e-11,2;UBERON:0007771,5.81e-11,2;UBERON:0003297,5.81e-11,2;UBERON:0001821,5.81e-11,2;UBERON:0003487,5.81e-11,2;UBERON:0001820,5.81e-11,2;UBERON:0005089,5.81e-11,2;UBERON:0005088,5.81e-11,2;UBERON:0001004,3.59e-07,74 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.563817616383885,2.00146596706261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75826367343678,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5905718941022,0,0.0945348171640679,0,0,0.261958150995425,1.82147644146271,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,2.51239109112286,2.72746120590835,4.58887352622406,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0.354920400119532,0.168584690078102,0.241011029883482,0.110293972732394,0,0.474541238222193,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0.491953754172454,0,3.51200913307602,1.1240175325762,0.703702806881416,0.648119116109707,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,1.51183915378974,1.55952606966625,0.268675568108545,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0.391602314925481,0,0,0,0,0,0,0,0,0.153461973288062,0,0.256278298511402,0,0,0,0,0,0,0,0,0,3.40860999515584,0.368323955743585,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0.0915694648183434,0,1.72279661398852,2.60024098414608,0,0,0,0,0,0,0,0,0,2.14870389969272,0.768760269460425,0.382838137483752,1.51736671283325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,1.05844323998063,0.670302275535787,0,0,3.87454835404107,3.36942951335251,0.886860307073351,0.918893600827838,0,0,0,0,0,0,0,0,0,0,3.18552280775341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0.19924798825107,0.276283915531148,0,0,0,0,0,1.25314822272926,0,0.986434056369336,0,0,0,0,0,2.3438498497671,0.174919999992391,0,1.82069517256799,0,1.18193840883968,0,0,0,0,0,0,0,0,0,0,1.53366118706464,0.461701551022782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.353830258013357,0.611030144933625,0,0,0,0,0,0,0,3.32629852184552,0,0.394584402849391,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.587954384486266,0.34823682632161,1.04836000945218,0,0.19351266257817,0.365446585430928,0.246346371159628,0.484945082442097,0,0.451961481561065,0,0,0,0.195551382734803,0.240476460754601,0,0,0.288180834308212,0,0,0,0,6.36373893465348,0,0,0,0,0,0,0,0,0,0,0.458320848023367,0,0.199679000498991,0,0,0,0,0,0,0,0.0674035438541849,0.295282444544246,0,0,0,0,0,0,0,0,0,0.335434687599266,0.157611414598396,0.104909176269996,0,0,0.767660789277781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513260513652988,4.9337051562167,0,0,0,0,0,0,1.91502377331055,0.544017803369474,0.5013797880454,1.53172788381731,0.655745261419609,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0.449803112163605,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72041036127604,0,0,0,0,0,0,0.419638523158333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55184068102667,0.707818340086442,0.366857197043358,0.115525666150338,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0.496211178389294,0,3.96063525682745,0,0,0,0,0.177404740325278,0,0,0,0,0.118193840883968,0,0.549451649953598,0,0,0,0,0,0.0714765441766563,0,0,0,0,0.414432328326074,0.6828739083758,1.38251932362818,0,0,0,0.846774100381858,0,0,0,0,0,0.243835849964539,0,0,0,0.485710993059139,0,0,0,0,0,0,0.385870790539723,0.218559560503957,0,0,0,0,0,0,0.169927114687817,0,0,0,2.67830907908486,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250707539292375,0.227336094654718,0.267964130156178,0,0,0,0,0,0.0620747142958579,0,0,0,0.435433495793923,0.342233301085281,0.471464371102113,1.5061663132462,0.332660356546013,0.0814032686109745,0,0,0,4.69281884806909,0.122241444182866,0,0,0.805095174364105,0 | |phase1_expression=0.181678379270557,0.428201047781966,0.563817616383885,2.00146596706261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75826367343678,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5905718941022,0,0.0945348171640679,0,0,0.261958150995425,1.82147644146271,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,2.51239109112286,2.72746120590835,4.58887352622406,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0.354920400119532,0.168584690078102,0.241011029883482,0.110293972732394,0,0.474541238222193,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0.491953754172454,0,3.51200913307602,1.1240175325762,0.703702806881416,0.648119116109707,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,1.51183915378974,1.55952606966625,0.268675568108545,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0.391602314925481,0,0,0,0,0,0,0,0,0.153461973288062,0,0.256278298511402,0,0,0,0,0,0,0,0,0,3.40860999515584,0.368323955743585,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0.0915694648183434,0,1.72279661398852,2.60024098414608,0,0,0,0,0,0,0,0,0,2.14870389969272,0.768760269460425,0.382838137483752,1.51736671283325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,1.05844323998063,0.670302275535787,0,0,3.87454835404107,3.36942951335251,0.886860307073351,0.918893600827838,0,0,0,0,0,0,0,0,0,0,3.18552280775341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0.19924798825107,0.276283915531148,0,0,0,0,0,1.25314822272926,0,0.986434056369336,0,0,0,0,0,2.3438498497671,0.174919999992391,0,1.82069517256799,0,1.18193840883968,0,0,0,0,0,0,0,0,0,0,1.53366118706464,0.461701551022782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0.353830258013357,0.611030144933625,0,0,0,0,0,0,0,3.32629852184552,0,0.394584402849391,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.587954384486266,0.34823682632161,1.04836000945218,0,0.19351266257817,0.365446585430928,0.246346371159628,0.484945082442097,0,0.451961481561065,0,0,0,0.195551382734803,0.240476460754601,0,0,0.288180834308212,0,0,0,0,6.36373893465348,0,0,0,0,0,0,0,0,0,0,0.458320848023367,0,0.199679000498991,0,0,0,0,0,0,0,0.0674035438541849,0.295282444544246,0,0,0,0,0,0,0,0,0,0.335434687599266,0.157611414598396,0.104909176269996,0,0,0.767660789277781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513260513652988,4.9337051562167,0,0,0,0,0,0,1.91502377331055,0.544017803369474,0.5013797880454,1.53172788381731,0.655745261419609,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0.449803112163605,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72041036127604,0,0,0,0,0,0,0.419638523158333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55184068102667,0.707818340086442,0.366857197043358,0.115525666150338,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0.496211178389294,0,3.96063525682745,0,0,0,0,0.177404740325278,0,0,0,0,0.118193840883968,0,0.549451649953598,0,0,0,0,0,0.0714765441766563,0,0,0,0,0.414432328326074,0.6828739083758,1.38251932362818,0,0,0,0.846774100381858,0,0,0,0,0,0.243835849964539,0,0,0,0.485710993059139,0,0,0,0,0,0,0.385870790539723,0.218559560503957,0,0,0,0,0,0,0.169927114687817,0,0,0,2.67830907908486,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250707539292375,0.227336094654718,0.267964130156178,0,0,0,0,0,0.0620747142958579,0,0,0,0.435433495793923,0.342233301085281,0.471464371102113,1.5061663132462,0.332660356546013,0.0814032686109745,0,0,0,4.69281884806909,0.122241444182866,0,0,0.805095174364105,0 | ||
|short_description=p5@TSKU | |||
}} | }} |
Latest revision as of 08:19, 20 September 2015
Short description: | p5@TSKU |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TSKU_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000533752_5end |
EntrezGene: | TSKU |
HGNC: | 28850 |
UniProt: | E9PLG7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 3.01e-16 | 14 |
gingival epithelial cell | 3.82e-16 | 3 |
epithelial cell | 2.66e-12 | 253 |
endo-epithelial cell | 3.04e-12 | 42 |
sebum secreting cell | 5.81e-11 | 2 |
epithelial cell of sweat gland | 5.81e-11 | 2 |
epithelial cell of skin gland | 5.81e-11 | 2 |
acinar cell of sebaceous gland | 5.81e-11 | 2 |
endodermal cell | 5.49e-10 | 58 |
acinar cell | 2.30e-09 | 5 |
epidermal cell | 5.58e-09 | 9 |
epithelial cell of alimentary canal | 1.36e-08 | 20 |
protein secreting cell | 7.08e-08 | 6 |
epithelial cell of Malassez | 2.67e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 3.82e-16 | 3 |
skin gland | 5.81e-11 | 2 |
epidermis gland | 5.81e-11 | 2 |
gland of integumental system | 5.81e-11 | 2 |
sebaceous gland | 5.81e-11 | 2 |
skin sebaceous gland | 5.81e-11 | 2 |
sweat gland | 5.81e-11 | 2 |
sweat gland placode | 5.81e-11 | 2 |
sebaceous gland placode | 5.81e-11 | 2 |
respiratory system | 3.59e-07 | 74 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 8.61e-09 | 14 |