FFCP PHASE1:Hg19::chr12:109536322..109536334,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:109536322..109536334,+ to FFCP PHASE1:Hg19::chr12:109536322..109536334,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7374 | |EntrezGene=7374 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12572 | |HGNC=12572 | ||
|TSSclassifier=strong | |||
|UniProt=Q6FHS8 | |UniProt=Q6FHS8 | ||
|association_with_transcript=190bp_to_CR541673,GQ129388,GQ129389_5end | |||
|cluster_id=chr12:109536322..109536334,+ | |||
|description=CAGE_peak_5_at_UNG_5end | |||
|id=chr12:109536322..109536334,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.86e-10!180;CL:0000220!1.34e-07!246;CL:0002321!3.12e-07!248;CL:0000680!9.95e-07!57;CL:0000056!9.95e-07!57;CL:0000355!9.95e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000136;9.92e-18;13!CL:0002521;7.39e-09;3!CL:0000746;2.54e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,6.04e-19,15;CL:0002521,6.79e-09,3;CL:0000746,3.70e-08,3;CL:0000513,3.70e-08,3;CL:0000680,1.73e-07,58;CL:0000056,1.73e-07,58;CL:0000355,1.73e-07,58;CL:0000187,4.27e-07,55 | |||
|ontology_enrichment_development_v019=CL:0000513;2.54e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.87e-16!365;UBERON:0000481!7.69e-13!347;UBERON:0000119!9.42e-13!312;UBERON:0000483!1.09e-12!309;UBERON:0000477!6.59e-11!286;UBERON:0000468!2.52e-09!659;UBERON:0002100!2.76e-09!216;UBERON:0004111!8.06e-09!241;UBERON:0000914!1.74e-08!83;UBERON:0002329!1.74e-08!83;UBERON:0003077!1.74e-08!83;UBERON:0003059!1.74e-08!83;UBERON:0007282!1.74e-08!83;UBERON:0009618!1.74e-08!83;UBERON:0007285!1.74e-08!83;UBERON:0000467!1.81e-08!625;UBERON:0000480!2.65e-08!626;UBERON:0007100!5.50e-08!27;UBERON:0000948!6.89e-08!24;UBERON:0005498!6.89e-08!24;UBERON:0004140!6.89e-08!24;UBERON:0009881!6.89e-08!24;UBERON:0004141!6.89e-08!24;UBERON:0003084!6.89e-08!24;UBERON:0007005!6.89e-08!24;UBERON:0004139!6.89e-08!24;UBERON:0004291!6.89e-08!24;UBERON:0002050!7.14e-08!605;UBERON:0005423!7.14e-08!605;UBERON:0000025!7.83e-08!194;UBERON:0004290!8.92e-08!70;UBERON:0000923!9.35e-08!604;UBERON:0005291!9.35e-08!604;UBERON:0006598!9.35e-08!604;UBERON:0002532!9.35e-08!604;UBERON:0007023!1.36e-07!115;UBERON:0000922!1.44e-07!612;UBERON:0000486!2.91e-07!82;UBERON:0002385!4.44e-07!63;UBERON:0001015!4.44e-07!63;UBERON:0000383!4.44e-07!63;UBERON:0004872!5.30e-07!84;UBERON:0001134!7.61e-07!61;UBERON:0002036!7.61e-07!61;UBERON:0003082!7.61e-07!61;UBERON:0005256!7.75e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0002190;7.39e-09;3!UBERON:0002067;5.75e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,1.01e-11,71;UBERON:0003059,1.01e-11,71;UBERON:0007282,1.01e-11,71;UBERON:0004290,1.01e-11,71;UBERON:0009618,1.01e-11,71;UBERON:0003077,1.77e-11,72;UBERON:0007285,1.77e-11,72;UBERON:0000486,1.94e-11,83;UBERON:0007524,3.04e-11,73;UBERON:0007503,3.71e-10,78;UBERON:0005256,7.68e-10,122;UBERON:0002190,6.79e-09,3;UBERON:0001134,9.72e-08,62;UBERON:0002036,9.72e-08,62;UBERON:0003082,9.72e-08,62;UBERON:0000490,1.84e-07,148;UBERON:0002385,2.27e-07,64;UBERON:0001015,2.27e-07,64;UBERON:0000383,2.27e-07,64;UBERON:0007100,3.03e-07,27;UBERON:0003104,4.08e-07,160;UBERON:0009142,4.08e-07,160;UBERON:0002067,4.50e-07,9;UBERON:0004016,4.50e-07,9;UBERON:0010083,4.50e-07,9;UBERON:0005904,7.43e-07,4 | |||
|phase1_expression=0.363356758541113,1.92690471501885,2.11431606143957,0,1.34088328328186,0,2.53299878168311,1.26343974685366,8.61912573059467,0.982935746006035,0,0,0,0.618831764800233,0,0.672325146451775,0.602694528023977,0,0,0.123121058076788,0.204000691244253,0,0.286235987131057,0.136874425072884,0.125542639594803,0,0.0821005894499457,0,0,0,0,0,0.30120591877825,0.739508020333575,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0.383220493601921,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,1.34140171940727,1.02290049474824,0,1.00267582127178,0.869079113764942,0.795285947051099,0.486634870302636,0.850813354476611,0.443458794925128,0.527008714158756,0.523916301990851,0,0,0,0,0.132957960518865,0,0,0,0.596287222100115,0.860234595106124,0.347140501607594,0.56530794192401,0.838998872419812,0,0.835979866147242,0.516833518338658,0,0.33472061276467,0,0,0.24406205754817,0.735326160691737,0,0.446498641420399,0.44905874525234,0.225222960966644,0,0,0.549605231791222,0,0,0.436094052142534,0.993943903390637,0.633152558322899,0.794455084879313,0.286836620748814,0,0.560677600142307,1.06748995729705,0.24666754841716,0.933633106199299,0.942974704487816,0.326923806226917,0.605429710579726,2.30470369792,0.234321431833797,2.18512053781224,1.1409436430889,1.64393548606981,0.23486899728753,0,0,1.22492502752936,0.368502951935304,1.34323515528495,0,0.247266929278557,0,0,0,0.375355559615893,0.831192346452549,0.438977620880838,0.919463387397059,1.20190447125277,0.453728732640084,0.538168907066586,0.427114777637135,0.847727604638247,0,0.103052529238439,0.515281080091258,0.558350568994769,0.337552664482532,0.194874010322397,0,0.460249493211497,0.646584227275248,0,0.201504196455281,0.67824236924195,0.386521706326594,0,0.573609190778008,0,0,0,0.10366105501537,0,0,0,1.28648187638577,2.76269842704961,0.928735856063958,1.44375896333917,0,0,0.241011029883482,0.110293972732394,0,0.237270619111097,0,0.392442930250692,0,0.738155454624648,0,1.6462960453256,1.47008711385542,0,0,0,0,0,0.343135620597051,0.329250856225877,0,0.201057944823262,0.185176890317059,0.651616610620649,1.03993478527958,0,0.231860809950154,0.352226082707465,0.144366447761074,0.462985512576611,0.190254152234598,0,0,0.246217006087397,0,0,0,0.671928512795438,0.708875486211932,0,0,0,0,0.088048434013226,0.207328115540772,0.864719720501769,0.12624243342638,0.698476837213859,0.763976851116555,2.34434894420094,3.4214489204541,0.514137463516618,1.20137223137567,2.85826432630578,0.448524337381443,0,0.51336800074665,0.646358578788889,0,0,0,0,0.771622122786426,0,0,0.857867961948885,1.08524321078289,0,0.325736184293735,0.710783897485092,0.791951872933429,1.80863626235752,0,0.699810938274399,0,0,0,0.479249710983165,0,0,1.01346914667305,0.61642896765115,0.537182889719687,0.112085143993527,0.197030760201927,0,0.256686072559497,1.01637849688985,0,0.773288812777695,0.335032530668698,0,0,0,0,0.981531933753119,0,0.271265023699736,0.623912584592421,0.892144943985809,0.473107245101804,0.234282829985426,0,0,1.03473071292505,0,0.368738337083406,0.955719759148911,0.391602314925481,0.343143423810856,0,0,0,1.21251028578504,1.66435439510497,0.604780586659361,0.248107807818777,0.306923946576125,0.280660094433074,0.896974044789907,0.511707249066704,0.804269605718038,0,0.308419387605311,0.710246901252508,0.410635780069046,0,0.348631135379878,0,1.00253235151642,0.184161977871793,0.459257792658427,0.546273504020151,0.262248829918848,0,0,0,0,0,0,0.340187410553031,0.215915916102139,0,0.812839312631559,0,0.254876273045038,0.831076008928724,0.447749509444357,0,0,0,0.656029291399411,0,0.309123034943167,0,0.082509499920588,0,1.30012049207304,1.6068392984416,0.676695028044854,0.770243085573222,0.307007349452259,0,1.18162269355101,1.16013355131383,0.255679882248303,0.623224249527161,0.661139661443912,0.192190067365106,0.382838137483752,0.50578890427775,0,0,0,0,1.06461206063404,0,1.29726953372744,0.286249773483982,1.116475108079,0.949138274156178,0.38126038784765,1.02359116524534,0.855877976067841,0.95460974377781,0,0.359744915166629,0.274537029736055,0.706874414074119,1.2130948894399,1.58510321173008,0,0.48763373908959,0.243713489631284,0,0.136499911407986,0.565621727814851,1.13008116620243,0,0.66343897524122,0.876901770507525,1.15755106853338,1.31178950409327,0.202910376962704,0.30982349809975,0.563391205064483,0.143411352204052,0.687743287091848,1.07001315444375,1.06428319221179,1.68886108238131,1.31717957183961,0,0,0.384888450902048,0.670302275535787,1.08890984861323,0.0941438007767792,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0.159426272728822,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0.278406173895242,0,0,0,0,0,1.02555725490326,0,0,0.284136146806413,0.23874448473769,0.593929361665277,0,0,0.984685914873589,0.111308705022906,0.1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| ||
|short_description=p5@UNG | |||
}} | }} |
Latest revision as of 06:16, 16 September 2015
Short description: | p5@UNG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_UNG_5end |
Coexpression cluster: | NA |
Association with transcript: | 190bp_to_CR541673, GQ129388, GQ129389_5end |
EntrezGene: | UNG |
HGNC: | 12572 |
UniProt: | Q6FHS8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 6.04e-19 | 15 |
subcutaneous fat cell | 6.79e-09 | 3 |
cardiac muscle cell | 3.70e-08 | 3 |
cardiac muscle myoblast | 3.70e-08 | 3 |
muscle precursor cell | 1.73e-07 | 58 |
myoblast | 1.73e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.73e-07 | 58 |
muscle cell | 4.27e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
somite | 1.01e-11 | 71 |
presomitic mesoderm | 1.01e-11 | 71 |
presumptive segmental plate | 1.01e-11 | 71 |
dermomyotome | 1.01e-11 | 71 |
trunk paraxial mesoderm | 1.01e-11 | 71 |
paraxial mesoderm | 1.77e-11 | 72 |
presumptive paraxial mesoderm | 1.77e-11 | 72 |
multilaminar epithelium | 1.94e-11 | 83 |
dense mesenchyme tissue | 3.04e-11 | 73 |
epithelial vesicle | 3.71e-10 | 78 |
trunk mesenchyme | 7.68e-10 | 122 |
subcutaneous adipose tissue | 6.79e-09 | 3 |
skeletal muscle tissue | 9.72e-08 | 62 |
striated muscle tissue | 9.72e-08 | 62 |
myotome | 9.72e-08 | 62 |
unilaminar epithelium | 1.84e-07 | 148 |
muscle tissue | 2.27e-07 | 64 |
musculature | 2.27e-07 | 64 |
musculature of body | 2.27e-07 | 64 |
primary circulatory organ | 3.03e-07 | 27 |
mesenchyme | 4.08e-07 | 160 |
entire embryonic mesenchyme | 4.08e-07 | 160 |
dermis | 4.50e-07 | 9 |
dermatome | 4.50e-07 | 9 |
future dermis | 4.50e-07 | 9 |
duct of male reproductive system | 7.43e-07 | 4 |