FFCP PHASE1:Hg19::chr12:12619407..12619418,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:12619407..12619418,+ | |||
|coexpression_cluster_id=C103 | |||
|description=CAGE_peak_at_chr12:12619407..12619418,+ | |||
|id=chr12:12619407..12619418,+ | |||
|ontology_enrichment_celltype=CL:0000791!5.67e-56!18;CL:0000789!5.67e-56!18;CL:0002420!5.67e-56!18;CL:0002419!5.67e-56!18;CL:0000790!5.67e-56!18;CL:0000084!2.40e-39!25;CL:0000827!2.40e-39!25;CL:0000625!1.40e-32!11;CL:0000624!3.22e-29!6;CL:0000838!2.62e-28!52;CL:0000542!1.09e-27!53;CL:0000051!1.09e-27!53;CL:0000738!3.89e-18!140;CL:0000898!5.10e-16!3;CL:0002087!2.01e-15!119;CL:0000842!6.32e-15!3;CL:0000623!1.41e-14!3;CL:0000825!1.41e-14!3;CL:0000037!1.17e-13!172;CL:0000566!1.17e-13!172;CL:0000988!1.39e-12!182;CL:0002031!1.11e-11!124;CL:0000224!2.56e-11!4;CL:0000815!2.84e-11!2;CL:0000792!2.84e-11!2;CL:0002677!2.84e-11!2;CL:0002032!9.21e-11!165;CL:0000837!9.21e-11!165;CL:0000080!1.09e-07!6;CL:0000767!2.32e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000624;7.52e-44;6!CL:0000898;5.37e-33;3!CL:0000791;8.12e-28;18!CL:0000789;8.12e-28;18!CL:0002419;8.12e-28;18!CL:0000815;1.14e-22;2!CL:0000792;1.14e-22;2!CL:0002677;1.14e-22;2!CL:0000084;7.15e-20;25!CL:0000895;3.85e-12;1!CL:0000542;8.73e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,6.89e-44,6;CL:0000898,5.37e-33,3;CL:0000791,7.49e-28,18;CL:0000789,7.49e-28,18;CL:0002420,7.49e-28,18;CL:0002419,7.49e-28,18;CL:0000790,7.49e-28,18;CL:0000815,1.20e-22,2;CL:0000792,1.20e-22,2;CL:0002677,1.20e-22,2;CL:0000084,6.75e-20,25;CL:0000827,6.75e-20,25;CL:0000810,3.65e-12,1;CL:0000895,3.65e-12,1;CL:0002436,3.65e-12,1;CL:0002427,3.65e-12,1;CL:0002428,3.65e-12,1;CL:0002429,3.65e-12,1;CL:0002433,3.65e-12,1;CL:0002431,3.65e-12,1;CL:0002432,3.65e-12,1;CL:0000838,5.93e-12,52;CL:0000542,1.04e-11,53;CL:0000051,1.04e-11,53 | |||
|ontology_enrichment_development_v019=CL:0000790;8.12e-28;18!CL:0002427;3.85e-12;1!CL:0000051;8.73e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr12:12619407..12619418,+ | |||
}} | }} |
Latest revision as of 06:32, 24 July 2015
Short description: | p@chr12:12619407..12619418, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:12619407..12619418, + |
Coexpression cluster: | C103_CD4_CD8_Natural_Peripheral_Whole_Neutrophils_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 6.89e-44 | 6 |
naive T cell | 5.37e-33 | 3 |
mature alpha-beta T cell | 7.49e-28 | 18 |
alpha-beta T cell | 7.49e-28 | 18 |
immature T cell | 7.49e-28 | 18 |
mature T cell | 7.49e-28 | 18 |
immature alpha-beta T cell | 7.49e-28 | 18 |
regulatory T cell | 1.20e-22 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.20e-22 | 2 |
naive regulatory T cell | 1.20e-22 | 2 |
T cell | 6.75e-20 | 25 |
pro-T cell | 6.75e-20 | 25 |
CD4-positive, alpha-beta thymocyte | 3.65e-12 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 3.65e-12 | 1 |
mature CD4 single-positive thymocyte | 3.65e-12 | 1 |
resting double-positive thymocyte | 3.65e-12 | 1 |
double-positive blast | 3.65e-12 | 1 |
CD69-positive double-positive thymocyte | 3.65e-12 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 3.65e-12 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 3.65e-12 | 1 |
CD24-positive, CD4 single-positive thymocyte | 3.65e-12 | 1 |
lymphoid lineage restricted progenitor cell | 5.93e-12 | 52 |
lymphocyte | 1.04e-11 | 53 |
common lymphoid progenitor | 1.04e-11 | 53 |