FFCP PHASE1:Hg19::chr12:52602627..52602642,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:52602627..52602642,+ | |||
|description=CAGE_peak_at_chr12:52602627..52602642,+ | |||
|id=chr12:52602627..52602642,+ | |||
|ontology_enrichment_celltype=CL:0002076!2.84e-10!43;CL:0001014!1.10e-09!2;CL:0001016!1.10e-09!2;CL:0002231!6.36e-07!3;CL:0000223!6.68e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002149;2.19e-17;6!CL:0002255;2.19e-17;6!CL:0002623;1.35e-09;3!CL:0002231;1.74e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,2.01e-17,6;CL:0002255,2.01e-17,6;CL:0002076,7.93e-10,42;CL:0002623,1.54e-09,3;CL:0002231,1.67e-09,3;CL:0000223,3.21e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0005795;7.67e-11;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3001;2.19e-17;6!DOID:4556;1.10e-09;3!DOID:1749;4.11e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,2.01e-17,6;DOID:4556,1.10e-09,3;DOID:1749,4.04e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000200!2.93e-11!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0000997;5.22e-26;1!UBERON:0005056;5.22e-26;1!UBERON:0004176;5.22e-26;1!UBERON:0003134;4.38e-08;33!UBERON:0000995;9.37e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000997,4.61e-26,1;UBERON:0005056,4.61e-26,1;UBERON:0005156,4.06e-07,59;UBERON:0000990,4.06e-07,59 | |||
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| ||
|short_description=p@chr12:52602627..52602642,+ | |||
}} | }} |
Latest revision as of 09:29, 24 July 2015
Short description: | p@chr12:52602627..52602642, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:52602627..52602642, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 2.01e-17 | 6 |
stromal cell of endometrium | 2.01e-17 | 6 |
endo-epithelial cell | 7.93e-10 | 42 |
acinar cell of salivary gland | 1.54e-09 | 3 |
epithelial cell of prostate | 1.67e-09 | 3 |
endodermal cell | 3.21e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
mammalian vulva | 4.61e-26 | 1 |
external female genitalia | 4.61e-26 | 1 |
reproductive structure | 4.06e-07 | 59 |
reproductive system | 4.06e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 2.01e-17 | 6 |
lung large cell carcinoma | 1.10e-09 | 3 |
squamous cell carcinoma | 4.04e-08 | 14 |