FFCP PHASE1:Hg19::chr12:54398817..54398861,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:54398817..54398861,+ to FFCP PHASE1:Hg19::chr12:54398817..54398861,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:54398817..54398861,+ | |||
|description=CAGE_peak_at_chr12:54398817..54398861,+ | |||
|id=chr12:54398817..54398861,+ | |||
|ontology_enrichment_celltype=CL:0000136!9.40e-16!15;CL:0000055!1.04e-14!180;CL:0002334!6.73e-13!12;CL:0000057!3.69e-10!75;CL:0000325!1.27e-09!39;CL:0002570!5.47e-09!8;CL:0002620!4.68e-08!23 | |||
|ontology_enrichment_celltype_v019=CL:0000136;3.07e-21;13!CL:0002334;1.12e-19;12!CL:0002570;1.85e-12;8!CL:0000148;5.63e-11;10!CL:0002567;7.18e-08;3!CL:0002580;9.06e-08;3!CL:0000147;1.91e-07;14!CL:0002521;7.37e-07;3!CL:0002582;7.37e-07;3!CL:0000680;7.48e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,7.00e-25,15;CL:0002334,1.29e-19,12;CL:0002570,1.78e-12,8;CL:0000148,5.71e-11,10;CL:0000541,5.71e-11,10;CL:0002567,7.25e-08,3;CL:0002580,9.24e-08,3;CL:0000147,1.92e-07,14;CL:0002521,3.82e-07,3;CL:0002582,6.30e-07,3;CL:0000057,9.65e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001013!1.45e-14!14;UBERON:0002199!1.82e-10!45;UBERON:0002416!1.82e-10!45;UBERON:0002100!3.40e-08!216;UBERON:0002097!3.29e-07!40;UBERON:0004290!5.82e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;1.97e-19;14!UBERON:0002072;3.11e-10;5!UBERON:0001134;1.96e-08;16!UBERON:0002036;1.96e-08;16!UBERON:0003688;6.16e-08;6!UBERON:0002358;6.16e-08;6!UBERON:0003684;6.16e-08;6!UBERON:0001178;6.16e-08;6!UBERON:0004457;2.26e-07;9!UBERON:0000042;2.26e-07;9!UBERON:0000310;3.17e-07;10!UBERON:0002190;7.37e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,8.13e-20,14;UBERON:0002072,1.31e-10,5;UBERON:0002199,1.46e-08,46;UBERON:0002416,1.46e-08,46;UBERON:0003688,9.96e-08,6;UBERON:0002358,9.96e-08,6;UBERON:0003684,9.96e-08,6;UBERON:0001178,9.96e-08,6;UBERON:0000310,2.46e-07,10;UBERON:0002190,3.82e-07,3 | |||
|phase1_expression=2.36181893051724,1.92690471501885,1.9733616573436,1.0007329835313,1.34088328328186,0.872338524100369,2.53299878168311,1.89515962028049,2.87304191019822,0,0,0.218441372130172,0,0.990130823680373,0.331397375727916,0.672325146451775,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.579386075843295,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0.760272105718513,0.24406205754817,0,0,0,0,0,0,0,0.549605231791222,0,0,0,2.48485975847659,0.25326102332916,0.529636723252875,0.286836620748814,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,4.33401173600223,0.939475989150119,1.13311061057692,0.561803226808994,0,0,0.103325781175765,0,0,7.28129089550421,7.90479955997862,0,0,0,0,0.612975591598039,0,0,0,0.427114777637135,1.05965950579781,3.00091096084402,1.95799805553034,0.515281080091258,0.744467425326359,1.18143432568886,0.779496041289589,0.252433774244115,0.368199594569197,0.161646056818812,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,3.25057549622385,1.44375896333917,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.0007346808133,5.34783795781589,4.68869788840188,3.4214489204541,3.496134751913,5.1058319833466,6.28818151787272,0,0,0,2.58543431515556,14.3062578340753,2.535908257668,0,0,0.257207374262142,1.41849132023278,0.532844358032199,0,1.62786481617433,1.64648067356154,0.65147236858747,0,0,0,0,0.399891964728228,0,0,0,0,0,0,1.59259437334337,0,1.43248770591916,0,0,0,0,0,0,0,0,0,0,0,0,0.736148950314839,2.00068208423871,0.542530047399471,0,0,0,0,0.601892199455438,2.27407504055985,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,3.47350930946288,3.22270143904931,4.77122160536225,0.768834895534206,2.04682899626681,1.12597744800525,4.45254199334973,2.00472601943452,1.9531789784444,2.38168752440047,2.07701771673448,1.85936605535935,0,0,0,0.114814448164607,0,0,0,0.693138033939733,1.56869953835371,1.46139224653261,1.05551628892876,0,0,1.29549549661284,0,1.89662506280697,1.00337954770971,0,0.831076008928724,2.46262230194396,0,0,0,0,0,0.412164046590889,0,0,0,0,0,1.45006077438183,0.308097234229289,0.307007349452259,0.827019434907183,3.43744783578476,1.0151168573996,1.78975917573812,1.33548053470106,0,0,0,0,1.39453664789186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0.404364963146632,0,0,0.48763373908959,1.94970791705028,7.39551027297288,0.136499911407986,0.141405431953713,0,0,0.66343897524122,1.75380354101505,0,0,0.202910376962704,0.92947049429925,0,1.14729081763241,1.08073945114433,1.07001315444375,0,0,2.63435914367922,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90460633053462,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0.597743964753209,0.552567831062295,0,0,0,0,0,0,0,0.0986434056369336,0,1.11136990144637,0,0,0,0,0,1.44999915086959,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.230850775511391,0,0,1.16684937732704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,2.21879476821022,0,0,0,1.92199335066233,0.343972064943233,0,0,0,0.0969890164884194,0,0,0,2.78200456384186,0,0,0.160317640503067,0,0,0,1.60351234632282,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0.720599767084807,0,0.0787831823072236,0,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,0.709251365692784,0.734364233889974,0,0,0,0,0,0,0,0,0,0,0,3.9189245010647,3.05942647104339,0,0,0,0,0,2.11444506695002,0.106787412567695,0,0,0,0,0.852548188666271,0,9.24830265728106,3.7603484103405,8.27133057261346,8.19681576774511,0,0,0,0,0,0,0,0,0,2.27473676312472,0.856396000634902,0.235265819698172,0,0,2.83584125485061,1.40227985908335,3.88364103051829,0.378806010550178,0.754703705257725,2.66943366478961,0.915360273587694,0,0.15543720058278,0,0.318593534327405,0,0.621051827505038,0,0,0,0.450772826991655,0.380805212168795,0.813741466409323,0,0.107410557042488,0,0,0,1.37358282073117,2.02049693259551,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0.389720617678777,0,0,0,0,0,0,0,0,0,1.84105950251841,0,0,0,0.215649622793364,0,0.109209638192014,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526472298444801,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.532214220975833,0,0,0,0,0,0.222462803784138,0,0,0,0,0,0,0,0,0.23248285073625,0,0,0,0,0,0,2.24830801388074,1.619054690424,0.846774100381858,0,0,0,0,1.27595303699816,0,6.47428837187895,1.23195368227496,0,0.971421986118279,0,0,0.951360726220549,0.11294608203896,0,0.301925687133347,0.154348316215889,0,0,0.490296643507811,0,0,0,2.113278637917,0.679708458751268,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0.5290268405154,0.371995018166751,0,2.59575937274273,0,0,0,0,0,0,0,0.530450887527676,0.267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| |phase1_expression=2.36181893051724,1.92690471501885,1.9733616573436,1.0007329835313,1.34088328328186,0.872338524100369,2.53299878168311,1.89515962028049,2.87304191019822,0,0,0.218441372130172,0,0.990130823680373,0.331397375727916,0.672325146451775,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.579386075843295,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0.760272105718513,0.24406205754817,0,0,0,0,0,0,0,0.549605231791222,0,0,0,2.48485975847659,0.25326102332916,0.529636723252875,0.286836620748814,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,4.33401173600223,0.939475989150119,1.13311061057692,0.561803226808994,0,0,0.103325781175765,0,0,7.28129089550421,7.90479955997862,0,0,0,0,0.612975591598039,0,0,0,0.427114777637135,1.05965950579781,3.00091096084402,1.95799805553034,0.515281080091258,0.744467425326359,1.18143432568886,0.779496041289589,0.252433774244115,0.368199594569197,0.161646056818812,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,3.25057549622385,1.44375896333917,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.0007346808133,5.34783795781589,4.68869788840188,3.4214489204541,3.496134751913,5.1058319833466,6.28818151787272,0,0,0,2.58543431515556,14.3062578340753,2.535908257668,0,0,0.257207374262142,1.41849132023278,0.532844358032199,0,1.62786481617433,1.64648067356154,0.65147236858747,0,0,0,0,0.399891964728228,0,0,0,0,0,0,1.59259437334337,0,1.43248770591916,0,0,0,0,0,0,0,0,0,0,0,0,0.736148950314839,2.00068208423871,0.542530047399471,0,0,0,0,0.601892199455438,2.27407504055985,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,3.47350930946288,3.22270143904931,4.77122160536225,0.768834895534206,2.04682899626681,1.12597744800525,4.45254199334973,2.00472601943452,1.9531789784444,2.38168752440047,2.07701771673448,1.85936605535935,0,0,0,0.114814448164607,0,0,0,0.693138033939733,1.56869953835371,1.46139224653261,1.05551628892876,0,0,1.29549549661284,0,1.89662506280697,1.00337954770971,0,0.831076008928724,2.46262230194396,0,0,0,0,0,0.412164046590889,0,0,0,0,0,1.45006077438183,0.308097234229289,0.307007349452259,0.827019434907183,3.43744783578476,1.0151168573996,1.78975917573812,1.33548053470106,0,0,0,0,1.39453664789186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0.404364963146632,0,0,0.48763373908959,1.94970791705028,7.39551027297288,0.136499911407986,0.141405431953713,0,0,0.66343897524122,1.75380354101505,0,0,0.202910376962704,0.92947049429925,0,1.14729081763241,1.08073945114433,1.07001315444375,0,0,2.63435914367922,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90460633053462,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0.597743964753209,0.552567831062295,0,0,0,0,0,0,0,0.0986434056369336,0,1.11136990144637,0,0,0,0,0,1.44999915086959,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.230850775511391,0,0,1.16684937732704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,2.21879476821022,0,0,0,1.92199335066233,0.343972064943233,0,0,0,0.0969890164884194,0,0,0,2.78200456384186,0,0,0.160317640503067,0,0,0,1.60351234632282,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0.720599767084807,0,0.0787831823072236,0,0.13480708770837,0,0,0,0,0,0,0,0,0,0,0,0.709251365692784,0.734364233889974,0,0,0,0,0,0,0,0,0,0,0,3.9189245010647,3.05942647104339,0,0,0,0,0,2.11444506695002,0.106787412567695,0,0,0,0,0.852548188666271,0,9.24830265728106,3.7603484103405,8.27133057261346,8.19681576774511,0,0,0,0,0,0,0,0,0,2.27473676312472,0.856396000634902,0.235265819698172,0,0,2.83584125485061,1.40227985908335,3.88364103051829,0.378806010550178,0.754703705257725,2.66943366478961,0.915360273587694,0,0.15543720058278,0,0.318593534327405,0,0.621051827505038,0,0,0,0.450772826991655,0.380805212168795,0.813741466409323,0,0.107410557042488,0,0,0,1.37358282073117,2.02049693259551,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0.389720617678777,0,0,0,0,0,0,0,0,0,1.84105950251841,0,0,0,0.215649622793364,0,0.109209638192014,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526472298444801,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.532214220975833,0,0,0,0,0,0.222462803784138,0,0,0,0,0,0,0,0,0.23248285073625,0,0,0,0,0,0,2.24830801388074,1.619054690424,0.846774100381858,0,0,0,0,1.27595303699816,0,6.47428837187895,1.23195368227496,0,0.971421986118279,0,0,0.951360726220549,0.11294608203896,0,0.301925687133347,0.154348316215889,0,0,0.490296643507811,0,0,0,2.113278637917,0.679708458751268,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0.5290268405154,0.371995018166751,0,2.59575937274273,0,0,0,0,0,0,0,0.530450887527676,0.267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| ||
|short_description=p@chr12:54398817..54398861,+ | |||
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Latest revision as of 09:57, 24 July 2015
Short description: | p@chr12:54398817..54398861, + |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:54398817..54398861, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 7.00e-25 | 15 |
preadipocyte | 1.29e-19 | 12 |
mesenchymal stem cell of adipose | 1.78e-12 | 8 |
melanocyte | 5.71e-11 | 10 |
melanoblast | 5.71e-11 | 10 |
light melanocyte | 7.25e-08 | 3 |
preadipocyte of the breast | 9.24e-08 | 3 |
pigment cell | 1.92e-07 | 14 |
subcutaneous fat cell | 3.82e-07 | 3 |
visceral preadipocyte | 6.30e-07 | 3 |
fibroblast | 9.65e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 8.13e-20 | 14 |
hypodermis | 1.31e-10 | 5 |
integument | 1.46e-08 | 46 |
integumental system | 1.46e-08 | 46 |
omentum | 9.96e-08 | 6 |
peritoneum | 9.96e-08 | 6 |
abdominal cavity | 9.96e-08 | 6 |
visceral peritoneum | 9.96e-08 | 6 |
breast | 2.46e-07 | 10 |
subcutaneous adipose tissue | 3.82e-07 | 3 |