FFCP PHASE1:Hg19::chr12:68696657..68696661,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=56890 | |EntrezGene=56890 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29917 | |HGNC=29917 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-5bp_to_ENST00000539972_5end | |||
|cluster_id=chr12:68696657..68696661,- | |||
|coexpression_cluster_id=C153 | |||
|description=CAGE_peak_4_at_MDM1_5end | |||
|id=chr12:68696657..68696661,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003918;6.34e-08;10!UBERON:0007687;6.34e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4231;5.96e-34;2!DOID:1907;5.96e-34;2!DOID:1115;2.49e-14;20!DOID:201;2.59e-12;6!DOID:0060100;2.59e-12;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4231,7.05e-34,2;DOID:1907,7.05e-34,2;DOID:1115,2.58e-14,20;DOID:201,2.74e-12,6;DOID:0060100,2.74e-12,6 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.76e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p4@MDM1 | |||
}} | }} |
Latest revision as of 02:29, 20 September 2015
Short description: | p4@MDM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MDM1_5end |
Coexpression cluster: | C153_rhabdomyosarcoma_liposarcoma_pancreatic_somatostatinoma_Reticulocytes_lymphoma_testicular |
Association with transcript: | -5bp_to_ENST00000539972_5end |
EntrezGene: | MDM1 |
HGNC: | 29917 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
histiocytoma | 7.05e-34 | 2 |
malignant fibroxanthoma | 7.05e-34 | 2 |
sarcoma | 2.58e-14 | 20 |
connective tissue cancer | 2.74e-12 | 6 |
musculoskeletal system cancer | 2.74e-12 | 6 |