FFCP PHASE1:Hg19::chr13:33232408..33232414,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:33232408..33232414,+ to FFCP PHASE1:Hg19::chr13:33232408..33232414,+: NSchange) |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:33232408..33232414,+ | |||
|description=CAGE_peak_at_chr13:33232408..33232414,+ | |||
|id=chr13:33232408..33232414,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000785;3.25e-19;1!CL:0000819;3.25e-19;1!CL:0002195;2.72e-10;2!CL:0002571;2.72e-10;2!CL:0000775;2.05e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000819,2.71e-19,1;CL:0000785,2.49e-10,2;CL:0000955,2.49e-10,2;CL:0000818,2.49e-10,2;CL:0000954,2.49e-10,2;CL:0000816,2.49e-10,2;CL:0002195,3.27e-10,2;CL:0002571,3.27e-10,2;CL:0000775,1.93e-07,3;CL:0000817,2.63e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000954;2.72e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060073;3.25e-19;1!DOID:8675;3.25e-19;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,2.71e-19,1;DOID:8675,2.71e-19,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0005795;3.25e-19;1!UBERON:0007029;3.25e-19;1!UBERON:0002771;1.43e-10;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,2.25e-19,1;UBERON:0002771,1.43e-10,2 | |||
|phase1_expression=0,0.214100523890983,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0.0764134057479513,0.0821005894499457,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0.200544447470142,0,0,0.32389366601898,0,0.145398238779565,0,0.242584061187816,0,0,0,0.28769239232215,0,0.709446689665756,0,0,0,0.188242339542605,0,0.224723484445085,0,0,0,0,0.199463657621632,0.426224750532694,0,0,0,0,0,0,0.605399502633369,0,0,0.211255286311942,0,0,0.112328631146495,0.150176892841506,0,0.855038231223746,0.19891667719909,0.365328307529268,0,0,0,0.426730222566507,0,0,0,0.954053754535364,0.569212969109448,0,0,0,0,0,0.196709770113833,0.393010762749165,0.411202997999018,0,0,0.473447805734733,0,0.222820913770347,0,0.221533894583621,0.541607727530031,0.384273959177026,0.390178042679635,0,0,0.869409257205157,0.296573126324121,0,0,0.339928028092699,0,0.68725489096526,0,0,0,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0,0.201606743224732,0.534880391567015,0.434473211648397,0,0,0.255725123687061,0,0.50133791063589,0.289693037921647,0,0,0.189069634328136,0.443458794925128,0.175669571386252,0,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0.24666754841716,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0,0.23486899728753,0,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0.226864366320042,0.358779271377724,0,0.211931901159562,0.600182192168805,0.206105058476878,0,0,0.168776332241266,0,0.252433774244115,0,0.161646056818812,0.355009592516614,0,0.169560592310488,0,0,0,0.853815942907168,0.132529768321485,0,0.207322110030741,0,0,0,0,0,0,0,0.236613600079688,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,1.26755034821831,0,0,0.441463099414651,0.122988438543114,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0,0.12624243342638,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0.129271715757778,0,0.845302752556,0,0,0,0,0.266422179016099,0,0,0,0.65147236858747,1.06617584622764,0,0,0,0,0,1.00451418286425,0,0,0,0,0.144781306667579,0,0,0,0.394061520403854,0.862510299438069,0.513372145118994,0.254094624222463,0,0.773288812777695,0,0,0,2.99161459204025,0,0.36807447515742,0,0.271265023699736,0.415941723061614,0.535286966391485,0.315404830067869,0.117141414992713,0,0,0,0,0,0,0,0,0,0.431428401637234,0,0.303127571446259,0,0,0,0,0.280660094433074,0,0,0.160853921143607,0,0.308419387605311,0,0,0,0,0.120859449591622,0,0,0.229628896329213,0.364182336013434,0,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0.509752546090077,0,0,0,0.261435451024901,0.256450125116389,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0,0.154048617114644,0,0,0.214840489736547,0.580066775656914,0.0852266274161009,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0.190630193923825,0,0,0,0.78494864019923,0.179872457583315,0,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0.66343897524122,0,0,0,0,0.30982349809975,0,0,0,0,0.354761064070598,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0.371606350251437,0.144269212976445,0.284567373393656,0.159426272728822,0.399158742865633,0.383010740264733,0,0,1.12318871245384,0,0.313359791546046,0,0.677167111206413,0.321176150207399,0.201799707191048,0,0.687010689511529,0,0,0.333698283423817,0.19538809540204,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0.593929361665277,0,0,0.140669416410513,0.111308705022906,0.329607748453519,0,0,0,0.251932747854276,0.102268682502155,0.246169610922139,0,0,0,0,0.0986434056369336,2.3948309234694,0,0,0.185536196323703,0,0,0,0.724999575434793,0.1137934482855,0,0,0,0,0.173624994933292,0.885741385813839,0,0,0.331737779793674,0.591095237907095,0.438770794307945,0,0,0.0769502585037971,0,0,0.0897576444097721,0.108647371922008,0,0,0,0,0,0.166211681900156,0,0,0,0.37950746544837,0,0.421996129056054,0.163232808159148,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0,0,0,1.27718352450966,0,0,0,0,0.30607276163049,0,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0,0,0,0.34945333648406,0.171986032471617,0,0.219267951258557,0.0821154570532092,0,0.0882561266915003,0.225980740780532,0,0,0.189932387867636,0.195551382734803,0,0,0.39961921916426,0.144090417154106,0,0,0,0,0.235694034616795,0,0,0.101998217636322,0,0,0,0,0.859530882839914,0,0,0,0,0.199679000498991,0,0,0.134366944973453,0,0,0,0.247247575143499,0.0674035438541849,0.0984274815147488,0.254019996197353,0,0.136203406111576,0,0.275078873194468,0.83088067605837,0.2249738915515,0,0,0,0.0788057072991982,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0.164185041498678,0.170388021785422,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0.197611631897944,0.365377795142688,0,0,0,0.306345576763462,0,0,0,3.05065662254908,0.3755727921195,0,0.221858103073705,0,0.138348634936231,0,0,0.285465333544967,0,0,0.144921028610825,0,0,0,0,0,0,0,0.302461847526478,0,0.147855149989634,0,0,0.155262956876259,0.414706207840855,0,0,0,0.380805212168795,0,0.363697318405119,0.214821114084977,0,0,0.400027764663154,0,0,0,0,0,0.260994291965212,0.453411851024545,0,0,0.537266523244462,0.308801447160972,0.219284049578707,0,0.192914038270915,0.337884881306145,0,0,0.303859956177382,0.138258436151731,0,0,0,0.982829546539238,0,0.211312123358627,0,0.213383459388282,0.172214979660816,0,0,0.139879507719444,0,0,0,0.471797825567689,0.218419276384028,0.848662649770126,0.850299680406731,0,0,0,0.70975570501128,0,0.352675943690684,0,0.0642292250964595,0,0.159633859057151,0.82046545696302,0.252071696221718,0,0,0,0.0981477185010256,0,0,0.231051332300676,0,0,0,0,0.20170506870352,0.781514011233092,0,0.327543835020193,0,0,0,0.413373593002368,0.19024743058172,0,0,0.496211178389294,0.175871244359621,0,0.535701835878287,0,0,0,0.0887023701626388,0,0.171488009437418,0.0679697329768317,0.197318320688547,0.118193840883968,0.111231401892069,0.078493092850514,0.157115589916002,0.280272163313789,0.913158720509496,0.215927591218621,0,0.142953088353313,0,0.23248285073625,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0.098150233615243,0,0,0,0,1.45713297917742,0,0.198950775161368,0.118920090777569,0,0.109940516745429,0,0.0771741581079447,0.218559560503957,2.35158648180761,0,0,0,0.297046400327086,0,0,0,0,0.0999411559249289,0.357107877211315,0,0,0,0,0.286679166302903,0.315543124386369,0.0679914901909147,0.872701380680755,0.5290268405154,0.743990036333503,0,0,0.252332849670158,0,0,0,0,0,0.250707539292375,0.0757786982182394,0.267964130156178,0,0.310298987585686,0.426467963801962,0.714193294391221,0.193766729508018,0,0.224263725161227,0.0636471582781649,0.202117188958219,0.435433495793923,0.342233301085281,0,0,0,0,0,0,0.179650404213174,0,0.122241444182866,1.62758471326295,0,0.402547587182052,0 | |phase1_expression=0,0.214100523890983,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0.0764134057479513,0.0821005894499457,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0.200544447470142,0,0,0.32389366601898,0,0.145398238779565,0,0.242584061187816,0,0,0,0.28769239232215,0,0.709446689665756,0,0,0,0.188242339542605,0,0.224723484445085,0,0,0,0,0.199463657621632,0.426224750532694,0,0,0,0,0,0,0.605399502633369,0,0,0.211255286311942,0,0,0.112328631146495,0.150176892841506,0,0.855038231223746,0.19891667719909,0.365328307529268,0,0,0,0.426730222566507,0,0,0,0.954053754535364,0.569212969109448,0,0,0,0,0,0.196709770113833,0.393010762749165,0.411202997999018,0,0,0.473447805734733,0,0.222820913770347,0,0.221533894583621,0.541607727530031,0.384273959177026,0.390178042679635,0,0,0.869409257205157,0.296573126324121,0,0,0.339928028092699,0,0.68725489096526,0,0,0,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0,0.201606743224732,0.534880391567015,0.434473211648397,0,0,0.255725123687061,0,0.50133791063589,0.289693037921647,0,0,0.189069634328136,0.443458794925128,0.175669571386252,0,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0.24666754841716,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0,0.23486899728753,0,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0.226864366320042,0.358779271377724,0,0.211931901159562,0.600182192168805,0.206105058476878,0,0,0.168776332241266,0,0.252433774244115,0,0.161646056818812,0.355009592516614,0,0.169560592310488,0,0,0,0.853815942907168,0.132529768321485,0,0.207322110030741,0,0,0,0,0,0,0,0.236613600079688,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,1.26755034821831,0,0,0.441463099414651,0.122988438543114,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0,0.12624243342638,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0.129271715757778,0,0.845302752556,0,0,0,0,0.266422179016099,0,0,0,0.65147236858747,1.06617584622764,0,0,0,0,0,1.00451418286425,0,0,0,0,0.144781306667579,0,0,0,0.394061520403854,0.862510299438069,0.513372145118994,0.254094624222463,0,0.773288812777695,0,0,0,2.99161459204025,0,0.36807447515742,0,0.271265023699736,0.415941723061614,0.535286966391485,0.315404830067869,0.117141414992713,0,0,0,0,0,0,0,0,0,0.431428401637234,0,0.303127571446259,0,0,0,0,0.280660094433074,0,0,0.160853921143607,0,0.308419387605311,0,0,0,0,0.120859449591622,0,0,0.229628896329213,0.364182336013434,0,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0.509752546090077,0,0,0,0.261435451024901,0.256450125116389,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0,0.154048617114644,0,0,0.214840489736547,0.580066775656914,0.0852266274161009,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0.190630193923825,0,0,0,0.78494864019923,0.179872457583315,0,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0.66343897524122,0,0,0,0,0.30982349809975,0,0,0,0,0.354761064070598,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0.371606350251437,0.144269212976445,0.284567373393656,0.159426272728822,0.399158742865633,0.383010740264733,0,0,1.12318871245384,0,0.313359791546046,0,0.677167111206413,0.321176150207399,0.201799707191048,0,0.687010689511529,0,0,0.333698283423817,0.19538809540204,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0.593929361665277,0,0,0.140669416410513,0.111308705022906,0.329607748453519,0,0,0,0.251932747854276,0.102268682502155,0.246169610922139,0,0,0,0,0.0986434056369336,2.3948309234694,0,0,0.185536196323703,0,0,0,0.724999575434793,0.1137934482855,0,0,0,0,0.173624994933292,0.885741385813839,0,0,0.331737779793674,0.591095237907095,0.438770794307945,0,0,0.0769502585037971,0,0,0.0897576444097721,0.108647371922008,0,0,0,0,0,0.166211681900156,0,0,0,0.37950746544837,0,0.421996129056054,0.163232808159148,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0,0,0,1.27718352450966,0,0,0,0,0.30607276163049,0,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0,0,0,0.34945333648406,0.171986032471617,0,0.219267951258557,0.0821154570532092,0,0.0882561266915003,0.225980740780532,0,0,0.189932387867636,0.195551382734803,0,0,0.39961921916426,0.144090417154106,0,0,0,0,0.235694034616795,0,0,0.101998217636322,0,0,0,0,0.859530882839914,0,0,0,0,0.199679000498991,0,0,0.134366944973453,0,0,0,0.247247575143499,0.0674035438541849,0.0984274815147488,0.254019996197353,0,0.136203406111576,0,0.275078873194468,0.83088067605837,0.2249738915515,0,0,0,0.0788057072991982,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0.164185041498678,0.170388021785422,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0.197611631897944,0.365377795142688,0,0,0,0.306345576763462,0,0,0,3.05065662254908,0.3755727921195,0,0.221858103073705,0,0.138348634936231,0,0,0.285465333544967,0,0,0.144921028610825,0,0,0,0,0,0,0,0.302461847526478,0,0.147855149989634,0,0,0.155262956876259,0.414706207840855,0,0,0,0.380805212168795,0,0.363697318405119,0.214821114084977,0,0,0.400027764663154,0,0,0,0,0,0.260994291965212,0.453411851024545,0,0,0.537266523244462,0.308801447160972,0.219284049578707,0,0.192914038270915,0.337884881306145,0,0,0.303859956177382,0.138258436151731,0,0,0,0.982829546539238,0,0.211312123358627,0,0.213383459388282,0.172214979660816,0,0,0.139879507719444,0,0,0,0.471797825567689,0.218419276384028,0.848662649770126,0.850299680406731,0,0,0,0.70975570501128,0,0.352675943690684,0,0.0642292250964595,0,0.159633859057151,0.82046545696302,0.252071696221718,0,0,0,0.0981477185010256,0,0,0.231051332300676,0,0,0,0,0.20170506870352,0.781514011233092,0,0.327543835020193,0,0,0,0.413373593002368,0.19024743058172,0,0,0.496211178389294,0.175871244359621,0,0.535701835878287,0,0,0,0.0887023701626388,0,0.171488009437418,0.0679697329768317,0.197318320688547,0.118193840883968,0.111231401892069,0.078493092850514,0.157115589916002,0.280272163313789,0.913158720509496,0.215927591218621,0,0.142953088353313,0,0.23248285073625,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0.098150233615243,0,0,0,0,1.45713297917742,0,0.198950775161368,0.118920090777569,0,0.109940516745429,0,0.0771741581079447,0.218559560503957,2.35158648180761,0,0,0,0.297046400327086,0,0,0,0,0.0999411559249289,0.357107877211315,0,0,0,0,0.286679166302903,0.315543124386369,0.0679914901909147,0.872701380680755,0.5290268405154,0.743990036333503,0,0,0.252332849670158,0,0,0,0,0,0.250707539292375,0.0757786982182394,0.267964130156178,0,0.310298987585686,0.426467963801962,0.714193294391221,0.193766729508018,0,0.224263725161227,0.0636471582781649,0.202117188958219,0.435433495793923,0.342233301085281,0,0,0,0,0,0,0.179650404213174,0,0.122241444182866,1.62758471326295,0,0.402547587182052,0 | ||
|short_description=p@chr13:33232408..33232414,+ | |||
}} | }} |
Latest revision as of 15:42, 24 July 2015
Short description: | p@chr13:33232408..33232414, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:33232408..33232414, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 2.71e-19 | 1 |
mature B cell | 2.49e-10 | 2 |
pre-B-II cell | 2.49e-10 | 2 |
transitional stage B cell | 2.49e-10 | 2 |
small pre-B-II cell | 2.49e-10 | 2 |
immature B cell | 2.49e-10 | 2 |
hepatic stem cell | 3.27e-10 | 2 |
hepatic mesenchymal stem cell | 3.27e-10 | 2 |
neutrophil | 1.93e-07 | 3 |
precursor B cell | 2.63e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
surface | 2.25e-19 | 1 |
middle temporal gyrus | 1.43e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 2.71e-19 | 1 |
lymphosarcoma | 2.71e-19 | 1 |