FFCP PHASE1:Hg19::chr15:39874801..39874813,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:39874801..39874813,+ to FFCP PHASE1:Hg19::chr15:39874801..39874813,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:39874801..39874813,+ | |||
|coexpression_cluster_id=C142 | |||
|description=CAGE_peak_at_chr15:39874801..39874813,+ | |||
|id=chr15:39874801..39874813,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.70e-18!180;CL:0000057!4.05e-15!75;CL:0002371!5.13e-15!591;CL:0000144!1.50e-12!625;CL:0000548!1.08e-10!679;CL:0000004!1.08e-10!679;CL:0000255!1.08e-10!679;CL:0000222!1.97e-10!119;CL:0000012!2.60e-10!682;CL:0002139!1.55e-09!24;CL:0000115!3.05e-09!35;CL:0002334!5.92e-09!12;CL:0000359!1.11e-07!32;CL:0000192!2.25e-07!42;CL:0000514!2.25e-07!42;CL:0000220!3.46e-07!246;CL:0002321!3.66e-07!248;CL:0000723!6.70e-07!436;CL:0000680!7.81e-07!57;CL:0000056!7.81e-07!57;CL:0000355!7.81e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.08e-10;24!CL:0002620;2.77e-10;23!CL:0000115;8.20e-10;36!CL:0002334;8.18e-09;12!CL:0000057;1.48e-07;73!CL:0000071;4.32e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.37e-17,76;CL:0002139,1.03e-10,24;CL:0000115,1.21e-10,36;CL:0002620,3.19e-10,23;CL:0002334,6.26e-09,12;CL:0002078,1.25e-07,45;CL:0000071,3.62e-07,18;CL:0002546,3.62e-07,18;CL:0000048,5.32e-07,427;CL:0002580,7.66e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;4.32e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;2.01e-09;5!DOID:450;2.01e-09;5!DOID:66;2.01e-09;5!DOID:423;2.01e-09;5!DOID:0080000;2.01e-09;5!DOID:11722;2.01e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.27e-09,5;DOID:450,2.27e-09,5;DOID:66,2.27e-09,5;DOID:423,2.27e-09,5;DOID:0080000,2.27e-09,5;DOID:11722,2.27e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0004872!1.93e-14!84;UBERON:0002049!1.48e-13!79;UBERON:0007798!1.48e-13!79;UBERON:0000055!1.72e-13!69;UBERON:0004535!5.19e-13!110;UBERON:0001009!1.40e-12!113;UBERON:0001981!7.55e-12!60;UBERON:0007500!7.55e-12!60;UBERON:0004537!7.55e-12!60;UBERON:0006965!7.55e-12!60;UBERON:0003914!1.66e-11!118;UBERON:0001637!2.54e-10!42;UBERON:0003509!2.54e-10!42;UBERON:0004572!2.54e-10!42;UBERON:0000468!2.72e-09!659;UBERON:0000467!1.86e-08!625;UBERON:0000490!2.14e-08!138;UBERON:0000480!2.42e-08!626;UBERON:0004573!4.25e-08!33;UBERON:0004571!4.25e-08!33;UBERON:0003081!1.27e-07!216;UBERON:0000914!2.11e-07!83;UBERON:0002329!2.11e-07!83;UBERON:0003077!2.11e-07!83;UBERON:0003059!2.11e-07!83;UBERON:0007282!2.11e-07!83;UBERON:0009618!2.11e-07!83;UBERON:0007285!2.11e-07!83;UBERON:0000926!4.19e-07!448;UBERON:0004120!4.19e-07!448;UBERON:0006603!4.19e-07!448;UBERON:0002100!4.45e-07!216;UBERON:0005256!8.87e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;5.37e-11;6!UBERON:0002358;5.37e-11;6!UBERON:0003684;5.37e-11;6!UBERON:0001178;5.37e-11;6!UBERON:0001637;3.66e-10;42!UBERON:0003509;3.66e-10;42!UBERON:0004572;3.66e-10;42!UBERON:0004573;8.15e-10;33!UBERON:0004571;8.15e-10;33!UBERON:0000055;3.10e-08;65!UBERON:0000947;1.29e-07;21!UBERON:0010191;1.29e-07;21!UBERON:0007500;1.45e-07;56!UBERON:0001981;1.45e-07;56!UBERON:0004537;1.45e-07;56!UBERON:0004638;4.32e-07;18!UBERON:0001986;4.32e-07;18!UBERON:0004852;4.32e-07;18!UBERON:0004457;5.08e-07;9!UBERON:0000042;5.08e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,5.61e-14,68;UBERON:0001637,4.57e-12,42;UBERON:0003509,4.57e-12,42;UBERON:0004572,4.57e-12,42;UBERON:0007500,7.33e-12,59;UBERON:0001981,7.33e-12,59;UBERON:0004537,7.33e-12,59;UBERON:0006965,7.33e-12,59;UBERON:0002049,3.66e-11,78;UBERON:0007798,3.66e-11,78;UBERON:0003688,6.75e-11,6;UBERON:0002358,6.75e-11,6;UBERON:0003684,6.75e-11,6;UBERON:0001178,6.75e-11,6;UBERON:0004573,1.31e-10,33;UBERON:0004571,1.31e-10,33;UBERON:0004872,6.10e-09,83;UBERON:0002097,2.55e-08,41;UBERON:0004535,6.08e-08,109;UBERON:0000947,9.33e-08,21;UBERON:0010191,9.33e-08,21;UBERON:0001009,1.60e-07,112;UBERON:0004638,3.62e-07,18;UBERON:0001986,3.62e-07,18;UBERON:0004852,3.62e-07,18;UBERON:0002199,5.76e-07,46;UBERON:0002416,5.76e-07,46;UBERON:0000487,9.73e-07,22 | |||
|phase1_expression=3.08853244759946,6.42301571672949,2.11431606143957,10.007329835313,1.34088328328186,8.72338524100369,0,0,0,0.245733936501509,1.39560233594486,0.655324116390517,1.31883489114227,0,0.662794751455832,2.6893005858071,1.20538905604795,2.19093027116212,2.43966399395253,0.123121058076788,0.204000691244253,0.313454721478088,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0,0.919421224478927,0.6024118375565,0,0,0,0,0,1.80490002723128,0,0,0,0,0.145398238779565,0,0.242584061187816,1.39457422143411,0.411167888021826,0,2.58923153089935,0.256160706529101,0,2.41321976515633,0,1.35426486594342,1.50593871634084,0,0,3.06083892370903,0.320929027076094,0,0.989553900560148,0.199463657621632,0.852449501065388,3.77272010217159,0,0,2.51248665256743,0,0,1.21079900526674,0,0,0,0,0,0.112328631146495,0.750884464207532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.722878304769133,0,0.724232594804119,0,2.43317435151318,0,0,0,0,0,0,0,0,0,0,0,0,0.39752481473341,0,1.38856200643038,0.56530794192401,0,1.6507082516404,1.67195973229448,0.516833518338658,0.35576626268671,2.34304428935269,2.01414658554573,0,0.976248230192678,1.83831540172934,2.43042584364528,1.25019619597712,0.673588117878509,1.0135033243499,1.53316637465883,0,1.46561395144326,0,0,1.3082821564276,12.424298792383,1.01304409331664,1.98613771219828,2.29469296599051,0,0.560677600142307,2.1349799145941,2.22000793575444,0.311211035399766,0.269421344139376,0.980771418680752,0,0.576175924479999,0,0,0,0,0,0.161872944368132,0,0,0.122834317311768,0.309977343527296,4.75201142912821,7.41800787835671,0,0,0,0,0.831192346452549,1.31693286264251,3.98434134538726,3.30523729594513,0.453728732640084,4.48474089222155,3.63047560991565,2.33125091275518,2.40072876867522,1.23663035086127,2.31876486041066,1.30281799432113,1.5189869901714,2.14361411354637,1.7670364197088,2.39329736469978,2.10139873864455,3.55009592516614,0.906768884048762,0.847802961552438,0,0.818238361772504,0,0.121973706129595,0,0,0,0,0,0,5.14592750554308,1.38134921352481,1.39310378409594,0,0,0,0,0.220587945464788,0,0,0,0.196221465125346,0,0,0,0.4115740113314,0,0,0,0,0,0.122988438543114,0,0.768251997860379,0,0.804231779293047,0.462942225792648,0,0,0,0.115930404975077,0,2.02113026865503,4.1668696131895,3.61482889245737,0,0,0,0,0,0.93733833986777,1.00789276919316,0.708875486211932,0.268675568108545,0.871901815541886,0,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0,0.387815147273333,0,0,1.06375246633948,0,0.257207374262142,0,0,0.57191197463259,0,0,0,0.355391948742546,0.791951872933429,0,0,0,0,0,0,0.479249710983165,0,0,0.434343920002738,0.61642896765115,0.537182889719687,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0.271265023699736,4.78332981520856,8.3861624734666,5.04647728108591,5.73992933464295,1.50473049863859,2.27407504055985,0,0,1.47495334833363,1.65078867489357,0,0,0,0.215714200818617,0.106727557803444,0.606255142892519,0,0.604780586659361,1.98486246255021,10.5888761568763,8.98112302185835,1.53766979106841,4.09365799253363,3.21707842287215,2.96836132889982,0.616838775210622,0.710246901252508,0.328508624055237,1.03850885836724,0.581051892299796,0,1.80455823272956,0.0920809889358963,0.459257792658427,0,0.393373244878272,0,0,0,0,0.105551628892876,1.13733384070897,1.19065593693561,0.647747748306418,4.62681758070868,0.270946437543853,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0.082509499920588,0,0,1.6068392984416,0,0,0.15350367472613,0.551346289938122,0.107420244868274,0,0,0.178064071293475,0.661139661443912,0.576570202095319,0.765676274967505,0.10115778085555,0,2.83331112147576,0,0,0,0,0.9266210955196,0.286249773483982,0.372158369359667,0.316379424718726,0.38126038784765,0.255897791311334,0,0.318203247925937,0,0,0.274537029736055,0.235624804691373,0.202182481573316,1.58510321173008,2.10629228119491,0,0,2.11300293513511,0.136499911407986,0.424216295861138,0,1.10273068709225,1.32687795048244,1.75380354101505,0.578775534266688,0,1.01455188481352,0.92947049429925,1.69017361519345,0.286822704408103,0.294747123039363,0.7133421029625,0,0.422215270595328,0,0.379473173765715,0.349934720244983,0.288666338176536,0,1.08890984861323,0,0,0,1.33029046061003,1.60806380144872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.811367035427949,0,0,0,0,0,0,0,2.14870036263921,0.296964680832639,4.30024982938925,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0,0,3.42143546427988,0.449341755736634,0,0,0.295930216910801,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0.139423744278603,0,0.455768223388005,0,0,0,0.31900115973192,0.732780747214898,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.174118413160805,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0.137041924646751,0.19871461170299,0,0,0.0801588202515337,0,0,0,0,0,0.288109595976299,0,0,0,0,0.509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| |phase1_expression=3.08853244759946,6.42301571672949,2.11431606143957,10.007329835313,1.34088328328186,8.72338524100369,0,0,0,0.245733936501509,1.39560233594486,0.655324116390517,1.31883489114227,0,0.662794751455832,2.6893005858071,1.20538905604795,2.19093027116212,2.43966399395253,0.123121058076788,0.204000691244253,0.313454721478088,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0,0.919421224478927,0.6024118375565,0,0,0,0,0,1.80490002723128,0,0,0,0,0.145398238779565,0,0.242584061187816,1.39457422143411,0.411167888021826,0,2.58923153089935,0.256160706529101,0,2.41321976515633,0,1.35426486594342,1.50593871634084,0,0,3.06083892370903,0.320929027076094,0,0.989553900560148,0.199463657621632,0.852449501065388,3.77272010217159,0,0,2.51248665256743,0,0,1.21079900526674,0,0,0,0,0,0.112328631146495,0.750884464207532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.722878304769133,0,0.724232594804119,0,2.43317435151318,0,0,0,0,0,0,0,0,0,0,0,0,0.39752481473341,0,1.38856200643038,0.56530794192401,0,1.6507082516404,1.67195973229448,0.516833518338658,0.35576626268671,2.34304428935269,2.01414658554573,0,0.976248230192678,1.83831540172934,2.43042584364528,1.25019619597712,0.673588117878509,1.0135033243499,1.53316637465883,0,1.46561395144326,0,0,1.3082821564276,12.424298792383,1.01304409331664,1.98613771219828,2.29469296599051,0,0.560677600142307,2.1349799145941,2.22000793575444,0.311211035399766,0.269421344139376,0.980771418680752,0,0.576175924479999,0,0,0,0,0,0.161872944368132,0,0,0.122834317311768,0.309977343527296,4.75201142912821,7.41800787835671,0,0,0,0,0.831192346452549,1.31693286264251,3.98434134538726,3.30523729594513,0.453728732640084,4.48474089222155,3.63047560991565,2.33125091275518,2.40072876867522,1.23663035086127,2.31876486041066,1.30281799432113,1.5189869901714,2.14361411354637,1.7670364197088,2.39329736469978,2.10139873864455,3.55009592516614,0.906768884048762,0.847802961552438,0,0.818238361772504,0,0.121973706129595,0,0,0,0,0,0,5.14592750554308,1.38134921352481,1.39310378409594,0,0,0,0,0.220587945464788,0,0,0,0.196221465125346,0,0,0,0.4115740113314,0,0,0,0,0,0.122988438543114,0,0.768251997860379,0,0.804231779293047,0.462942225792648,0,0,0,0.115930404975077,0,2.02113026865503,4.1668696131895,3.61482889245737,0,0,0,0,0,0.93733833986777,1.00789276919316,0.708875486211932,0.268675568108545,0.871901815541886,0,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0,0.387815147273333,0,0,1.06375246633948,0,0.257207374262142,0,0,0.57191197463259,0,0,0,0.355391948742546,0.791951872933429,0,0,0,0,0,0,0.479249710983165,0,0,0.434343920002738,0.61642896765115,0.537182889719687,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0.271265023699736,4.78332981520856,8.3861624734666,5.04647728108591,5.73992933464295,1.50473049863859,2.27407504055985,0,0,1.47495334833363,1.65078867489357,0,0,0,0.215714200818617,0.106727557803444,0.606255142892519,0,0.604780586659361,1.98486246255021,10.5888761568763,8.98112302185835,1.53766979106841,4.09365799253363,3.21707842287215,2.96836132889982,0.616838775210622,0.710246901252508,0.328508624055237,1.03850885836724,0.581051892299796,0,1.80455823272956,0.0920809889358963,0.459257792658427,0,0.393373244878272,0,0,0,0,0.105551628892876,1.13733384070897,1.19065593693561,0.647747748306418,4.62681758070868,0.270946437543853,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0.082509499920588,0,0,1.6068392984416,0,0,0.15350367472613,0.551346289938122,0.107420244868274,0,0,0.178064071293475,0.661139661443912,0.576570202095319,0.765676274967505,0.10115778085555,0,2.83331112147576,0,0,0,0,0.9266210955196,0.286249773483982,0.372158369359667,0.316379424718726,0.38126038784765,0.255897791311334,0,0.318203247925937,0,0,0.274537029736055,0.235624804691373,0.202182481573316,1.58510321173008,2.10629228119491,0,0,2.11300293513511,0.136499911407986,0.424216295861138,0,1.10273068709225,1.32687795048244,1.75380354101505,0.578775534266688,0,1.01455188481352,0.92947049429925,1.69017361519345,0.286822704408103,0.294747123039363,0.7133421029625,0,0.422215270595328,0,0.379473173765715,0.349934720244983,0.288666338176536,0,1.08890984861323,0,0,0,1.33029046061003,1.60806380144872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.811367035427949,0,0,0,0,0,0,0,2.14870036263921,0.296964680832639,4.30024982938925,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0,0,3.42143546427988,0.449341755736634,0,0,0.295930216910801,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0.139423744278603,0,0.455768223388005,0,0,0,0.31900115973192,0.732780747214898,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.174118413160805,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0.137041924646751,0.19871461170299,0,0,0.0801588202515337,0,0,0,0,0,0.288109595976299,0,0,0,0,0.509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| ||
|short_description=p@chr15:39874801..39874813,+ | |||
}} | }} |
Latest revision as of 01:13, 25 July 2015
Short description: | p@chr15:39874801..39874813, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:39874801..39874813, + |
Coexpression cluster: | C142_Preadipocyte_Fibroblast_hepatic_Ewing_Adipocyte_Olfactory_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.37e-17 | 76 |
endothelial cell of vascular tree | 1.03e-10 | 24 |
endothelial cell | 1.21e-10 | 36 |
skin fibroblast | 3.19e-10 | 23 |
preadipocyte | 6.26e-09 | 12 |
meso-epithelial cell | 1.25e-07 | 45 |
blood vessel endothelial cell | 3.62e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.62e-07 | 18 |
multi fate stem cell | 5.32e-07 | 427 |
preadipocyte of the breast | 7.66e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
vessel | 5.61e-14 | 68 |
artery | 4.57e-12 | 42 |
arterial blood vessel | 4.57e-12 | 42 |
arterial system | 4.57e-12 | 42 |
epithelial tube open at both ends | 7.33e-12 | 59 |
blood vessel | 7.33e-12 | 59 |
blood vasculature | 7.33e-12 | 59 |
vascular cord | 7.33e-12 | 59 |
vasculature | 3.66e-11 | 78 |
vascular system | 3.66e-11 | 78 |
omentum | 6.75e-11 | 6 |
peritoneum | 6.75e-11 | 6 |
abdominal cavity | 6.75e-11 | 6 |
visceral peritoneum | 6.75e-11 | 6 |
systemic artery | 1.31e-10 | 33 |
systemic arterial system | 1.31e-10 | 33 |
splanchnic layer of lateral plate mesoderm | 6.10e-09 | 83 |
skin of body | 2.55e-08 | 41 |
cardiovascular system | 6.08e-08 | 109 |
aorta | 9.33e-08 | 21 |
aortic system | 9.33e-08 | 21 |
circulatory system | 1.60e-07 | 112 |
blood vessel endothelium | 3.62e-07 | 18 |
endothelium | 3.62e-07 | 18 |
cardiovascular system endothelium | 3.62e-07 | 18 |
integument | 5.76e-07 | 46 |
integumental system | 5.76e-07 | 46 |
simple squamous epithelium | 9.73e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.27e-09 | 5 |
myotonic disease | 2.27e-09 | 5 |
muscle tissue disease | 2.27e-09 | 5 |
myopathy | 2.27e-09 | 5 |
muscular disease | 2.27e-09 | 5 |
myotonic dystrophy | 2.27e-09 | 5 |