FFCP PHASE1:Hg19::chr15:66797172..66797204,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:66797172..66797204,- to FFCP PHASE1:Hg19::chr15:66797172..66797204,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6124 | |EntrezGene=6124 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10353 | |HGNC=10353 | ||
|TSSclassifier=strong | |||
|UniProt=E7EWF1,B4DP82,P36578 | |UniProt=E7EWF1,B4DP82,P36578 | ||
|association_with_transcript=0bp_to_ENST00000432669,ENST00000449253,NM_000968,uc002apv.2,uc002apw.2,uc010bhr.2,uc010ujq.1_5end | |||
|cluster_id=chr15:66797172..66797204,- | |||
|description=CAGE_peak_1_at_RPL4_5end | |||
|id=chr15:66797172..66797204,- | |||
|ontology_enrichment_celltype=CL:0000012!2.15e-33!682;CL:0000548!6.22e-32!679;CL:0000004!6.22e-32!679;CL:0000255!6.22e-32!679;CL:0000003!4.42e-31!722;CL:0000144!5.15e-23!625;CL:0002371!1.16e-16!591;CL:0000063!3.70e-13!578;CL:0000034!6.05e-11!444;CL:0000723!2.70e-10!436;CL:0000048!1.04e-09!430;CL:0000055!1.27e-09!180;CL:0000393!1.40e-07!60;CL:0000211!1.40e-07!60;CL:0000187!3.12e-07!54;CL:0000680!4.36e-07!57;CL:0000056!4.36e-07!57;CL:0000355!4.36e-07!57 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,2.14e-10,441;CL:0000723,9.12e-10,433;CL:0000048,3.37e-09,427;CL:0000393,2.69e-07,61;CL:0000211,2.69e-07,61;CL:0000187,6.12e-07,55;CL:0000680,8.27e-07,58;CL:0000056,8.27e-07,58;CL:0000355,8.27e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!9.75e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,9.75e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0000914!3.40e-08!83;UBERON:0002329!3.40e-08!83;UBERON:0003077!3.40e-08!83;UBERON:0003059!3.40e-08!83;UBERON:0007282!3.40e-08!83;UBERON:0009618!3.40e-08!83;UBERON:0007285!3.40e-08!83;UBERON:0004290!2.30e-07!70 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,4.11e-07,71;UBERON:0003059,4.11e-07,71;UBERON:0007282,4.11e-07,71;UBERON:0004290,4.11e-07,71;UBERON:0009618,4.11e-07,71 | |||
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 | ||
|short_description=p1@RPL4 | |||
}} | }} |
Latest revision as of 16:30, 18 September 2015
Short description: | p1@RPL4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RPL4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000432669, ENST00000449253, NM_000968, uc002apv.2, uc002apw.2, uc010bhr.2, uc010ujq.1_5end |
EntrezGene: | RPL4 |
HGNC: | 10353 |
UniProt: | E7EWF1B4DP82P36578 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 2.14e-10 | 441 |
somatic stem cell | 9.12e-10 | 433 |
multi fate stem cell | 3.37e-09 | 427 |
electrically responsive cell | 2.69e-07 | 61 |
electrically active cell | 2.69e-07 | 61 |
muscle cell | 6.12e-07 | 55 |
muscle precursor cell | 8.27e-07 | 58 |
myoblast | 8.27e-07 | 58 |
multi-potent skeletal muscle stem cell | 8.27e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
somite | 4.11e-07 | 71 |
presomitic mesoderm | 4.11e-07 | 71 |
presumptive segmental plate | 4.11e-07 | 71 |
dermomyotome | 4.11e-07 | 71 |
trunk paraxial mesoderm | 4.11e-07 | 71 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 9.75e-07 | 239 |