FFCP PHASE1:Hg19::chr15:74708308..74708313,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:74708308..74708313,- to FFCP PHASE1:Hg19::chr15:74708308..74708313,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:74708308..74708313,- | |||
|description=CAGE_peak_at_chr15:74708308..74708313,- | |||
|id=chr15:74708308..74708313,- | |||
|ontology_enrichment_celltype=CL:0002334!1.33e-11!12;CL:0000055!1.15e-08!180;CL:0000048!5.91e-08!430;CL:0000723!1.04e-07!436;CL:0000034!5.16e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0002334;2.99e-31;12!CL:0002583;4.01e-17;2!CL:0002582;2.26e-11;3!CL:0000511;5.97e-09;1!CL:0002625;5.97e-09;1!CL:0002581;5.97e-09;1!CL:0000216;5.97e-09;1!CL:0002591;5.97e-09;1!CL:0002379;5.97e-09;1!CL:0002559;5.31e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,2.69e-31,12;CL:0002583,4.54e-17,2;CL:0002582,3.09e-11,3;CL:0002379,3.05e-09,1;CL:0000511,3.31e-09,1;CL:0002625,3.31e-09,1;CL:0000216,3.31e-09,1;CL:0002581,3.88e-09,1;CL:0002591,7.27e-09,1;CL:0002559,4.70e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3620;5.97e-09;1!DOID:3565;5.97e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,3.05e-09,1;DOID:3565,3.05e-09,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;5.97e-09;1!UBERON:0001343;5.97e-09;1!UBERON:0007195;5.97e-09;1!UBERON:0004910;5.97e-09;1!UBERON:0004813;5.97e-09;1!UBERON:0002072;2.27e-07;5!UBERON:0002073;5.31e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,3.31e-09,1;UBERON:0001343,3.31e-09,1;UBERON:0004910,3.31e-09,1;UBERON:0005154,3.31e-09,1;UBERON:0005295,3.31e-09,1;UBERON:0004813,3.31e-09,1;UBERON:0005297,3.31e-09,1;UBERON:0005294,3.31e-09,1;UBERON:0010141,3.31e-09,1;UBERON:0005891,3.31e-09,1;UBERON:0007195,8.49e-09,1;UBERON:0002072,2.39e-07,5;UBERON:0002073,4.70e-07,5;UBERON:0005086,4.70e-07,5 | |||
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|phase1_expression=0.181678379270557,1.2846031433459,0.140954404095971,0,0.446961094427288,0,0,0,0,0,1.39560233594486,0,0.263766978228454,0,0,0,0,0.730310090387373,0.975865597581014,0.123121058076788,0.612002073732759,0.313454721478088,0,0,0.251085279189606,0.61130724598361,0.410502947249729,0.393553906568396,0.393364276848904,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0.290209238628584,0,0,0.251248665256743,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17447437874188,0.764546456250458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0.0945348171640679,0.665188192387692,0.087834785693126,0,0,0,0,0.174129737299267,0.398873881556595,0.953962497221368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.323745888736263,0,0.204154171254893,0.245668634623536,0.103325781175765,0,0,0,0,0,0,0,0.438977620880838,0.30648779579902,0.300476117813194,0,0.358779271377724,0,0,0.300091096084402,0.206105058476878,0.257640540045629,0.18611685633159,0.506328996723799,0.779496041289589,0.757301322732344,0,0,0.710019185033229,0.201504196455281,0.339121184620975,0.57978255948989,0,0,0,0,0,0,0,0,0,0.643240938192885,1.38134921352481,1.39310378409594,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0.297262324577456,0,0,0.283550194484773,0.0895585227028483,0,1.15014803749563,0.492663237895943,0.352193736052904,0.207328115540772,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,2.535908257668,0.26593811658487,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0.61642896765115,0.179060963239896,0.112085143993527,0,0,0,0,0,0,0,0,0,2.99161459204025,0,0,0,0,0,0,0,0,0,2.27407504055985,0,0,0.368738337083406,0,0,0,0,0,0,0,0,0,0.992431231275107,0.767309866440312,4.49056151092918,0.512556597022804,0,1.44768529029247,1.48418066444991,3.70103265126373,2.13074070375753,0.410635780069046,1.03850885836724,2.67283870457906,0,0.200506470303285,0,0.114814448164607,0.364182336013434,0,0,0.385076685522074,0,0,0.527758144464379,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0.219259876645935,0,0,0,0,0.103041011647722,0,0,0,0.650060246036521,1.6068392984416,0.096670718292122,0.154048617114644,0.460511024178389,0.689182862422653,0,0.145016693914229,1.10794615640931,0,0,0,0,0,0,0.31481234683064,0,0.308033580176089,0,0,0,0,0,0,0,0.511795582622668,0,0,0.78494864019923,0.179872457583315,0.274537029736055,0.117812402345686,0.202182481573316,0,0.421258456238981,0,0,0,0,0,1.13008116620243,0,0,0,0.578775534266688,0,0,0.6196469961995,0.563391205064483,0.143411352204052,0,0,0.354761064070598,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0.199579371432817,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0.123084805461069,0.622079175323615,0.179736702294654,0,0,0,0,1.11136990144637,0,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0.295547618953547,0,0,0,0,0,0.46112780877612,0,0.217294743844016,0.31900115973192,0.274792780205587,1.06606955203727,1.02193298195737,0,0,0.225595660617181,0,0,0,0,0,0.326465616318295,0.141353071433941,0,0,0,0,0,0,0,0,0,0.468528891450678,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0.677942222341597,0.137041924646751,0,0.0633107959558787,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.547621515567972,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0.0674035438541849,0,0,0,0,0.160753148465019,0,0.415440338029185,1.1248694577575,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0.864221491201268,0.653174720218818,0,0,0.340776043570843,0.226624183040251,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.732157589411779,0,0,0.221858103073705,0.124192805882767,0,0,0,0,1.88212655758537,0,0.144921028610825,0.895528817321244,0.934853239388898,0.554805861502613,0,0.251567901752575,0.889811221596536,0.228840068396924,0,0.310874401165561,0.591420599958536,0.477890301491107,0,0.776314784381297,0.829412415681711,2.12673371646396,0,0,0,0,0.909243296012797,0,0,1.59238355479446,0.800055529326307,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0.327130788511688,0.327609848846413,0.245772908753719,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0.352675943690684,0,0,0,0.159633859057151,0,0,0,0.484426936895553,0,0,0,0,0,0.381382095467167,0,0.198916222116275,0,0.40341013740704,0,0,0,0.147856086217045,0,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.532214220975833,0.691403925334676,0,0,0.0657727735628491,0.236387681767936,0,0,0,0,0,0.215927591218621,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0.170426809518315,0,0.22910686854405,0,0,0.223710863595585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.98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| ||
|short_description=p@chr15:74708308..74708313,- | |||
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Latest revision as of 04:11, 25 July 2015
Short description: | p@chr15:74708308..74708313, - |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:74708308..74708313, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 2.69e-31 | 12 |
subcutaneous preadipocyte | 4.54e-17 | 2 |
visceral preadipocyte | 3.09e-11 | 3 |
meningothelial cell | 3.05e-09 | 1 |
androgen binding protein secreting cell | 3.31e-09 | 1 |
seminiferous tubule epithelial cell | 3.31e-09 | 1 |
Sertoli cell | 3.31e-09 | 1 |
perirenal preadipocyte | 3.88e-09 | 1 |
smooth muscle cell of the pulmonary artery | 7.27e-09 | 1 |
hair follicle cell | 4.70e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 3.31e-09 | 1 |
seminiferous tubule of testis | 3.31e-09 | 1 |
epithelium of male gonad | 3.31e-09 | 1 |
epithelial cord | 3.31e-09 | 1 |
sex cord | 3.31e-09 | 1 |
seminiferous tubule epithelium | 3.31e-09 | 1 |
testis sex cord | 3.31e-09 | 1 |
genital ridge | 3.31e-09 | 1 |
primitive sex cord of indifferent gonad | 3.31e-09 | 1 |
coelomic epithelium | 3.31e-09 | 1 |
stroma of bone marrow | 8.49e-09 | 1 |
hypodermis | 2.39e-07 | 5 |
hair follicle | 4.70e-07 | 5 |
hair follicle placode | 4.70e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 3.05e-09 | 1 |
meningioma | 3.05e-09 | 1 |