FFCP PHASE1:Hg19::chr16:1275258..1275289,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:1275258..1275289,- to FFCP PHASE1:Hg19::chr16:1275258..1275289,-: NSchange) |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=25823 | |EntrezGene=25823 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14134 | |HGNC=14134 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NRR2 | |UniProt=Q9NRR2 | ||
|association_with_transcript=-4bp_to_ENST00000234798,NM_012467,uc002ckw.2_5end | |||
|cluster_id=chr16:1275258..1275289,- | |||
|coexpression_cluster_id=C201 | |||
|description=CAGE_peak_1_at_TPSG1_5end | |||
|id=chr16:1275258..1275289,- | |||
|ontology_enrichment_celltype=CL:0002274!1.11e-25!5;CL:0000457!1.11e-25!5;CL:0002191!1.11e-25!5;CL:0000097!1.11e-25!5;CL:0000831!1.11e-25!5;CL:0002028!1.11e-25!5;CL:0000163!2.19e-14!9;CL:0002563!5.09e-09!4 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0001045;7.72e-21;1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!7.57e-28!27;UBERON:0000059!1.38e-26!11;UBERON:0001155!8.25e-23!9;UBERON:0005409!2.62e-21!35;UBERON:0004907!2.61e-15!5;UBERON:0001046!1.87e-10!19;UBERON:0001154!1.43e-09!1;UBERON:0001153!1.43e-09!1;UBERON:0001052!4.16e-09!4;UBERON:0001242!5.09e-09!4;UBERON:0001262!5.09e-09!4;UBERON:0004786!5.09e-09!4;UBERON:0004808!5.09e-09!4;UBERON:0001277!5.09e-09!4;UBERON:0004921!2.65e-08!129;UBERON:0004185!2.65e-08!129;UBERON:0003350!2.21e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;3.85e-88;17!UBERON:0005409;5.57e-69;22!UBERON:0000059;3.73e-45;11!UBERON:0004921;3.30e-43;33!UBERON:0002108;2.88e-36;4!UBERON:0001155;1.25e-35;9!UBERON:0001154;7.72e-21;1!UBERON:0001153;7.72e-21;1!UBERON:0009854;7.72e-21;1!UBERON:0004907;8.82e-17;5!UBERON:0001555;1.82e-16;54!UBERON:0001007;2.33e-13;81!UBERON:0002114;6.78e-08;2!UBERON:0000922;1.51e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.48e-88,17;UBERON:0005409,4.78e-61,25;UBERON:0000059,3.40e-45,11;UBERON:0002108,2.88e-36,4;UBERON:0001155,1.14e-35,9;UBERON:0001154,6.31e-21,1;UBERON:0001153,6.31e-21,1;UBERON:0001045,6.31e-21,1;UBERON:0004907,8.14e-17,5;UBERON:0004921,4.04e-13,118;UBERON:0001007,1.31e-10,145;UBERON:0001555,1.31e-10,145;UBERON:0007026,1.31e-10,145;UBERON:0004119,1.42e-09,160;UBERON:0000925,1.42e-09,160;UBERON:0006595,1.42e-09,160;UBERON:0011216,2.87e-08,223;UBERON:0002114,6.78e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,1.59884970106048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.616339038092582,0.829312462163088,0.432359860250884,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,1.65770349318689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.565412285735763,0,35.8294295188262,3.62676014463691,21.9970852176105,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,6.39211104356647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487671699929078,0,0,0,0,0,0,0,0,0,0,5.09349443512435,20.1074795663641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1161073620616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,1.59884970106048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.616339038092582,0.829312462163088,0.432359860250884,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,1.65770349318689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.565412285735763,0,35.8294295188262,3.62676014463691,21.9970852176105,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,6.39211104356647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487671699929078,0,0,0,0,0,0,0,0,0,0,5.09349443512435,20.1074795663641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1161073620616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@TPSG1 | |||
}} | }} |
Latest revision as of 15:24, 24 September 2015
Short description: | p1@TPSG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TPSG1_5end |
Coexpression cluster: | C201_colon_small_adenocarcinoma_duodenum_temporal_signet_gall |
Association with transcript: | -4bp_to_ENST00000234798, NM_012467, uc002ckw.2_5end |
EntrezGene: | TPSG1 |
HGNC: | 14134 |
UniProt: | Q9NRR2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 3.48e-88 | 17 |
gastrointestinal system | 4.78e-61 | 25 |
large intestine | 3.40e-45 | 11 |
small intestine | 2.88e-36 | 4 |
colon | 1.14e-35 | 9 |
vermiform appendix | 6.31e-21 | 1 |
caecum | 6.31e-21 | 1 |
midgut | 6.31e-21 | 1 |
lower digestive tract | 8.14e-17 | 5 |
subdivision of digestive tract | 4.04e-13 | 118 |
digestive system | 1.31e-10 | 145 |
digestive tract | 1.31e-10 | 145 |
primitive gut | 1.31e-10 | 145 |
endoderm-derived structure | 1.42e-09 | 160 |
endoderm | 1.42e-09 | 160 |
presumptive endoderm | 1.42e-09 | 160 |
organ system subdivision | 2.87e-08 | 223 |
duodenum | 6.78e-08 | 2 |