FFCP PHASE1:Hg19::chr17:6544113..6544125,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:6544113..6544125,+ to FFCP PHASE1:Hg19::chr17:6544113..6544125,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84817 | |EntrezGene=84817 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28218 | |HGNC=28218 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BRA2 | |UniProt=Q9BRA2 | ||
|association_with_transcript=35bp_to_ENST00000250101_5end | |||
|cluster_id=chr17:6544113..6544125,+ | |||
|description=CAGE_peak_4_at_TXNDC17_5end | |||
|id=chr17:6544113..6544125,+ | |||
|ontology_enrichment_celltype=CL:0000066!5.81e-18!254;CL:0002076!4.43e-15!43;CL:0000223!3.38e-13!59;CL:0002251!5.14e-10!21;CL:0002159!1.63e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;2.14e-10;42!CL:0000624;1.56e-09;6!CL:0002231;1.88e-09;3!CL:0000791;3.99e-08;18!CL:0000789;3.99e-08;18!CL:0002419;3.99e-08;18!CL:0002368;2.51e-07;13!CL:0002252;3.84e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.84e-12,42;CL:0000624,1.37e-09,6;CL:0002231,1.89e-09,3;CL:0000223,1.54e-08,58;CL:0000791,3.56e-08,18;CL:0000789,3.56e-08,18;CL:0002420,3.56e-08,18;CL:0002419,3.56e-08,18;CL:0000790,3.56e-08,18;CL:0002368,1.67e-07,13;CL:0002252,2.67e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000790;3.99e-08;18!UBERON:0009143;3.84e-07;1 | |||
|ontology_enrichment_disease=DOID:305!5.11e-22!106;DOID:0050687!4.91e-15!143;DOID:1749!4.35e-13!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!5.09e-16!72;UBERON:0004119!1.33e-12!169;UBERON:0000925!1.33e-12!169;UBERON:0006595!1.33e-12!169;UBERON:0000065!1.63e-12!53;UBERON:0000072!9.57e-11!46;UBERON:0001007!1.30e-10!155;UBERON:0001555!1.30e-10!155;UBERON:0007026!1.30e-10!155;UBERON:0004921!1.78e-09!129;UBERON:0004185!1.78e-09!129;UBERON:0001557!2.10e-09!19;UBERON:0000077!4.97e-09!130;UBERON:0001041!7.92e-09!98;UBERON:0001737!1.11e-07!9;UBERON:0008947!1.27e-07!38;UBERON:0003258!1.27e-07!38;UBERON:0000344!1.41e-07!12;UBERON:0000161!2.94e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0000974;2.75e-09;6!UBERON:0001043;1.05e-08;3!UBERON:0003343;9.92e-07;4!UBERON:0004785;9.92e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001043,8.03e-09,3;UBERON:0009143,8.03e-09,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0,0.672325146451775,0.602694528023977,0,0.487932798790507,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0.464448369948228,1.83884244895785,0,0,0.232401601740905,0.284338464974843,0,0,0.200544447470142,0.434021741431704,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0.56738522469114,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1384259382189,0,0,0,0,0,1.7703879310245,1.17903228824749,3.28962398399215,0,0.32592226663359,0,1.94826728407911,0,0,0,0,0,0,0,0,0,0,0,1.04535523804977,0,0.383220493601921,2.06176467289578,0,0,0,0,0.150575119077773,0,0,0.236777252044017,0,0.403213486449465,2.13952156626806,1.73789284659359,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0.728590576585084,0.741568885568859,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,3.87780264148325,1.74437620857014,0,0,0,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0.257640540045629,0,0,0,0.252433774244115,0.0920498986422993,0,0.355009592516614,0,0,1.93260853163297,0.272746120590835,0.286804595389004,0.121973706129595,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0,0,0.354920400119532,0.505754070234305,0.723033089650446,0.882351781859152,0,0.949082476444386,0.808987848960987,1.17732879075208,0.38474715694639,0,0,0,0,0,0,0,0,0.491953754172454,0,1.09750285408626,0,0.502644862058154,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0.335964256397719,0.850650583454319,0.626909658919938,0.290633938513962,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,0.985153801009636,0.862510299438069,0.77005821767849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0.604297247958111,6.81721999031168,4.69613043573071,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0.0852266274161009,0,1.81813406897076,1.53752053892085,0.765676274967505,1.51736671283325,0,0,0,0,0.532306030317022,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0.288666338176536,0.670302275535787,0,0.0941438007767792,2.15252686335615,0,0.443430153536676,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0.490080431962063,0,0,0.355709216742071,0.478278818186467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0.307160702099232,0,0,0,0,0.422250816255987,0,0,0.251932747854276,0,0.123084805461069,0,0.269605053441981,0.895105873378046,0,0,0,0,0,0,0,0,0.437299999980979,0,0.910347586283997,0.762760950878299,0.709163045303809,0,0,0,0,0,0,0,0,0,0.10893846351899,2.23077990845765,0.230850775511391,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,1.14262965711403,0.141353071433941,0,0,0.0884575645033392,0,2.37216902944498,0.988511511572023,0.939797545549098,0,0,0,0,0.586993856796269,0,0,0,0,0,1.20258735531594,0.207376382794494,0,0,0,0,0,0,0.520679215005393,0.587954384486266,0.34823682632161,0,0,0.0967563312890851,0.0730893170861856,0.328461828212837,1.35784623083787,0,0,0.137041924646751,0,0.0633107959558787,1.17330829640882,0,0.213452994739353,0,0.72045208577053,0,0.171594997861965,0.576219191952599,0,1.17847017308398,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0.315132729228895,0.164831716762333,0.0674035438541849,0.0984274815147488,0.169346664131569,0,0,0.482259445395058,0.137539436597234,0.83088067605837,0,0,0,0,0,0,0.105600336519406,0.179287339332845,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0.121792598380896,0.638341257770182,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0,0.303298235083296,0,0,0.468334905806882,0,0.149254802886874,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0.337884881306145,0,0,0,0,0,0,0,0,0,0.633936370075881,0.39997479170986,0.106691729694141,0,0,0.184105950251841,2.51783113895,2.48830904013189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27592034051333,0.353909170043221,1.10057159113007,0.577628330751691,0,0,0.198916222116275,0.0752103283492573,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0.0887023701626388,0,0,0,0,0.118193840883968,0.111231401892069,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0.51215543128185,0.691259661814092,0.430227358820278,0,0.0852134047591577,0,0,0,0,0,0.687051635306701,0.975343399858155,0,0,0,0,0,0,0.118920090777569,0,0.109940516745429,0,0.154348316215889,0,0.470317296361523,0,0,0,0,0,0,0,0.0644578879735772,0,0.357107877211315,0.352894871715692,0.240724100067505,0,0,0,0,0,0,0,0,0,0,0,0.218531143927391,0.126698501011437,0,0,0,0.250707539292375,0.454672189309436,0,0,0,1.49263787330687,0,0.129177819672012,0.062074714295857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|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0,0.672325146451775,0.602694528023977,0,0.487932798790507,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0.464448369948228,1.83884244895785,0,0,0.232401601740905,0.284338464974843,0,0,0.200544447470142,0.434021741431704,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0.56738522469114,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1384259382189,0,0,0,0,0,1.7703879310245,1.17903228824749,3.28962398399215,0,0.32592226663359,0,1.94826728407911,0,0,0,0,0,0,0,0,0,0,0,1.04535523804977,0,0.383220493601921,2.06176467289578,0,0,0,0,0.150575119077773,0,0,0.236777252044017,0,0.403213486449465,2.13952156626806,1.73789284659359,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0.728590576585084,0.741568885568859,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,3.87780264148325,1.74437620857014,0,0,0,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0.257640540045629,0,0,0,0.252433774244115,0.0920498986422993,0,0.355009592516614,0,0,1.93260853163297,0.272746120590835,0.286804595389004,0.121973706129595,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0,0,0.354920400119532,0.505754070234305,0.723033089650446,0.882351781859152,0,0.949082476444386,0.808987848960987,1.17732879075208,0.38474715694639,0,0,0,0,0,0,0,0,0.491953754172454,0,1.09750285408626,0,0.502644862058154,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0.335964256397719,0.850650583454319,0.626909658919938,0.290633938513962,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,0.985153801009636,0.862510299438069,0.77005821767849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0.604297247958111,6.81721999031168,4.69613043573071,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0.0852266274161009,0,1.81813406897076,1.53752053892085,0.765676274967505,1.51736671283325,0,0,0,0,0.532306030317022,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0.288666338176536,0.670302275535787,0,0.0941438007767792,2.15252686335615,0,0.443430153536676,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0.490080431962063,0,0,0.355709216742071,0.478278818186467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0.307160702099232,0,0,0,0,0.422250816255987,0,0,0.251932747854276,0,0.123084805461069,0,0.269605053441981,0.895105873378046,0,0,0,0,0,0,0,0,0.437299999980979,0,0.910347586283997,0.762760950878299,0.709163045303809,0,0,0,0,0,0,0,0,0,0.10893846351899,2.23077990845765,0.230850775511391,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,1.14262965711403,0.141353071433941,0,0,0.0884575645033392,0,2.37216902944498,0.988511511572023,0.939797545549098,0,0,0,0,0.586993856796269,0,0,0,0,0,1.20258735531594,0.207376382794494,0,0,0,0,0,0,0.520679215005393,0.587954384486266,0.34823682632161,0,0,0.0967563312890851,0.0730893170861856,0.328461828212837,1.35784623083787,0,0,0.137041924646751,0,0.0633107959558787,1.17330829640882,0,0.213452994739353,0,0.72045208577053,0,0.171594997861965,0.576219191952599,0,1.17847017308398,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0.315132729228895,0.164831716762333,0.0674035438541849,0.0984274815147488,0.169346664131569,0,0,0.482259445395058,0.137539436597234,0.83088067605837,0,0,0,0,0,0,0.105600336519406,0.179287339332845,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0.121792598380896,0.638341257770182,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0,0.303298235083296,0,0,0.468334905806882,0,0.149254802886874,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0.337884881306145,0,0,0,0,0,0,0,0,0,0.633936370075881,0.39997479170986,0.106691729694141,0,0,0.184105950251841,2.51783113895,2.48830904013189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27592034051333,0.353909170043221,1.10057159113007,0.577628330751691,0,0,0.198916222116275,0.0752103283492573,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0.0887023701626388,0,0,0,0,0.118193840883968,0.111231401892069,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0.51215543128185,0.691259661814092,0.430227358820278,0,0.0852134047591577,0,0,0,0,0,0.687051635306701,0.975343399858155,0,0,0,0,0,0,0.118920090777569,0,0.109940516745429,0,0.154348316215889,0,0.470317296361523,0,0,0,0,0,0,0,0.0644578879735772,0,0.357107877211315,0.352894871715692,0.240724100067505,0,0,0,0,0,0,0,0,0,0,0,0.218531143927391,0.126698501011437,0,0,0,0.250707539292375,0.454672189309436,0,0,0,1.49263787330687,0,0.129177819672012,0.062074714295857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| ||
|short_description=p4@TXNDC17 | |||
}} | }} |
Latest revision as of 22:10, 16 September 2015
Short description: | p4@TXNDC17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TXNDC17_5end |
Coexpression cluster: | NA |
Association with transcript: | 35bp_to_ENST00000250101_5end |
EntrezGene: | TXNDC17 |
HGNC: | 28218 |
UniProt: | Q9BRA2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.84e-12 | 42 |
CD4-positive, alpha-beta T cell | 1.37e-09 | 6 |
epithelial cell of prostate | 1.89e-09 | 3 |
endodermal cell | 1.54e-08 | 58 |
mature alpha-beta T cell | 3.56e-08 | 18 |
alpha-beta T cell | 3.56e-08 | 18 |
immature T cell | 3.56e-08 | 18 |
mature T cell | 3.56e-08 | 18 |
immature alpha-beta T cell | 3.56e-08 | 18 |
respiratory epithelial cell | 1.67e-07 | 13 |
epithelial cell of esophagus | 2.67e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
esophagus | 8.03e-09 | 3 |
esophageal region | 8.03e-09 | 3 |