FFCP PHASE1:Hg19::chr1:198290427..198290444,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:198290427..198290444,+ to FFCP PHASE1:Hg19::chr1:198290427..198290444,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:198290427..198290444,+ | |||
|description=CAGE_peak_at_chr1:198290427..198290444,+ | |||
|id=chr1:198290427..198290444,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002620;4.85e-13;23!CL:0002579;7.67e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,2.06e-13,23;CL:0000057,8.28e-11,76;CL:0000048,1.38e-08,427;CL:0000134,2.17e-08,354;CL:0000723,3.13e-08,433;CL:0002320,6.10e-08,361;CL:0002579,7.53e-08,3;CL:0000034,8.93e-08,441;CL:0000219,7.18e-07,386 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;2.00e-10;5!DOID:450;2.00e-10;5!DOID:66;2.00e-10;5!DOID:423;2.00e-10;5!DOID:0080000;2.00e-10;5!DOID:11722;2.00e-10;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,6.39e-11,5;DOID:450,6.39e-11,5;DOID:66,6.39e-11,5;DOID:423,6.39e-11,5;DOID:0080000,6.39e-11,5;DOID:11722,6.39e-11,5 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;3.84e-08;9!UBERON:0000042;3.84e-08;9!UBERON:0002097;8.18e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,1.44e-08,41;UBERON:0002384,2.41e-08,371;UBERON:0002199,3.06e-07,46;UBERON:0002416,3.06e-07,46 | |||
|phase1_expression=1.63510541343501,1.2846031433459,0.422863212287913,1.0007329835313,0.446961094427288,3.48935409640147,0,0.631719873426831,0,0,0,0,0.263766978228454,0.37129905888014,0.331397375727916,1.34465029290355,3.01347264011988,1.46062018077475,0.975865597581014,0,0,0,0,0.273748850145768,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0.142169232487422,0,0,0.401088894940283,0,0,0,0.257575567634187,0.145398238779565,0,0,0.232429036905685,0,0,0,0.256160706529101,0.236482229888585,0,0,0,0,0,0.224723484445085,0.612167784741805,0,0,0.329851300186716,0.797854630486527,0,0,0,0,0,0.521482918420201,0,0.605399502633369,0,0,0.211255286311942,0,0.209658645508376,0.44931452458598,0.150176892841506,0.16072558669708,0.570025487482497,0.19891667719909,0.182664153764634,0,0.546138611262131,0,0.426730222566507,0,0,0,0,1.1384259382189,0,0,0,0,0,0.196709770113833,0,0,0.167186495390678,0.32592226663359,0,0,0.668462741311041,0,0.221533894583621,0.270803863765016,0.640456598628376,0.390178042679635,0.822189523018381,0.552700035571697,0,0,0.267540828089713,0,0.226618685395132,0,0,0.253019692019503,0.637130828648193,0,0,0.150575119077773,0,0,0.236777252044017,0,0.201606743224732,0.267440195783507,0,0,0,0.511450247374121,2.1686349143074,0,1.44846518960824,0,1.94653948121054,0.189069634328136,0.443458794925128,0.087834785693126,0,0,0,0,0.522389211897802,0.398873881556595,0.238490624305342,0,0,0.198762407366705,0,0,0,0.419499436209906,0.275118041940067,0.208994966536811,0,0,0.66944122552934,0,0,0,0,0,0.17859945656816,0,0,0,0,0.183201743930407,0,0,0,3.97577561356255,1.51956613997496,0.662045904066094,1.14734648299525,1.41867352879343,0,0,0.49333509683432,0,0.808264032418128,0.490385709340376,0,0,0,0,0,0.747243402759005,0,0,0,0,0,0.103325781175765,0,0,0,0,0.168336113954066,0,0,0,1.22595118319608,0.751190294532984,1.47461838108027,1.4351170855109,2.13557388818567,2.96704661623387,1.80054657650641,1.75189299705346,2.83404594050192,2.97786970130544,0.675105328965065,1.07180705677318,2.27190396819703,3.40584624976508,0.80823028409406,3.55009592516614,2.51880245569101,1.69560592310488,0.386521706326594,0,0,0.243947412259191,0,0.232387885739037,0.414644220061482,0.252320850875628,0.36497735907583,0,1.92972281457866,0,0,0,0.473227200159376,0.674338760312407,1.20505514941741,0.441175890929576,0.653638332277218,0.237270619111097,0.404493924480493,0.392442930250692,0.769494313892781,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0.144366447761074,0.462985512576611,0.570762456703795,0,0,0,0,0.148631162288728,0,0,0,0.179117045405697,0.290633938513962,0,0,0.088048434013226,0,0,0,0.126995788584338,0,0,0,0.308482478109971,0.600686115687835,0.285826432630578,0,0,0.1466765716419,0.646358578788889,0,0,0.26593811658487,0,0,0,0,0.428933980974443,0,0,0.325736184293735,0.355391948742546,0,0.301439377059586,0.871533458600294,0.399891964728228,1.2162378064119,1.00451418286425,4.21667878966063,0.479249710983165,0,0,1.88215698667853,0.61642896765115,0.179060963239896,0.112085143993527,0,0.215627574859517,0.128343036279748,0.254094624222463,0,0,0,0,2.24702107184155,5.9832291840805,0.828831026872071,0.12269149171914,0.500170521059677,0,2.28767947683888,5.35286966391485,3.15404830067869,1.52283839490527,0,0,0,1.99267679560631,0,0.173767228936166,0,0,0,0,0.106727557803444,0.303127571446259,0,0,0.992431231275107,1.2276957863045,2.80660094433074,2.17836553734692,2.55853624533352,5.62988724002626,1.48418066444991,0.616838775210622,0.532685175939381,0.328508624055237,0.519254429183621,0.232420756919918,0.120859449591622,0.40101294060657,0.0920809889358963,0.459257792658427,0.728364672026868,0.393373244878272,0,0.15403067420883,0,0,0.105551628892876,0,0.340187410553031,0.431831832204279,0,0,0,0.254876273045038,0,0.223874754722178,0.438519753291869,0.261435451024901,0,0,0,0.103041011647722,0.183138929636687,0.165018999841176,0,0,3.21367859688319,0.096670718292122,0.154048617114644,0.307007349452259,0,0,0.435050081742686,0,0.267096106940212,0.495854746082934,0.192190067365106,0.255225424989168,0.10115778085555,3.253918845081,0.94443704049192,0.6970372701606,0,0,0,0.18532421910392,0.572499546967965,0,0.316379424718726,0.571890581771475,0,0,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0,1.58510321173008,0.421258456238981,0,1.46228093778771,1.05650146756755,0,0.707027159768564,0,0,0,2.19225442626881,0,0,0,0.30982349809975,0,0.286822704408103,0.294747123039363,0,0.354761064070598,1.05553817648832,1.31717957183961,0,0.349934720244983,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0.822724546172388,0,0,1.58625035258854,0,0,0.245040215981032,0.185803175125719,0.144269212976445,0,1.27541018183058,0,0.191505370132367,0.211673582723883,0,0,0.228234679033192,0,0,0.338583555603207,0.1605880751037,0.201799707191048,0,0.343505344755765,0.307240764308458,0.223676107892416,0,0.19538809540204,0,0,0.540911356951966,0,0,0.18714054040822,0,0,0.222886768554957,0.284136146806413,2.3874448473769,0.890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| ||
|short_description=p@chr1:198290427..198290444,+ | |||
}} | }} |
Latest revision as of 01:54, 28 July 2015
Short description: | p@chr1:198290427..198290444, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:198290427..198290444, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 2.06e-13 | 23 |
fibroblast | 8.28e-11 | 76 |
multi fate stem cell | 1.38e-08 | 427 |
mesenchymal cell | 2.17e-08 | 354 |
somatic stem cell | 3.13e-08 | 433 |
connective tissue cell | 6.10e-08 | 361 |
omentum preadipocyte | 7.53e-08 | 3 |
stem cell | 8.93e-08 | 441 |
motile cell | 7.18e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
skin of body | 1.44e-08 | 41 |
connective tissue | 2.41e-08 | 371 |
integument | 3.06e-07 | 46 |
integumental system | 3.06e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 6.39e-11 | 5 |
myotonic disease | 6.39e-11 | 5 |
muscle tissue disease | 6.39e-11 | 5 |
myopathy | 6.39e-11 | 5 |
muscular disease | 6.39e-11 | 5 |
myotonic dystrophy | 6.39e-11 | 5 |