FFCP PHASE1:Hg19::chr1:202172827..202172845,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=59352 | |EntrezGene=59352 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19719 | |HGNC=19719 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T508 | |UniProt=Q5T508 | ||
|association_with_transcript=-18bp_to_ENST00000255432,ENST00000367277_5end | |||
|cluster_id=chr1:202172827..202172845,+ | |||
|coexpression_cluster_id=C98 | |||
|description=CAGE_peak_5_at_LGR6_5end | |||
|id=chr1:202172827..202172845,+ | |||
|ontology_enrichment_celltype=CL:0000625!2.17e-26!11;CL:0000791!2.49e-25!18;CL:0000789!2.49e-25!18;CL:0002420!2.49e-25!18;CL:0002419!2.49e-25!18;CL:0000790!2.49e-25!18;CL:0000084!2.80e-17!25;CL:0000827!2.80e-17!25;CL:0000838!2.53e-12!52;CL:0000542!5.24e-12!53;CL:0000051!5.24e-12!53;CL:0000623!2.94e-10!3;CL:0000825!2.94e-10!3;CL:0000037!3.00e-10!172;CL:0000566!3.00e-10!172;CL:0000767!1.03e-09!3;CL:0000738!1.06e-09!140;CL:0000842!1.54e-09!3;CL:0000988!3.12e-09!182;CL:0002087!1.23e-08!119;CL:0002032!1.79e-08!165;CL:0000837!1.79e-08!165;CL:0000224!3.11e-07!4;CL:0002031!3.99e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000625;5.45e-62;11!CL:0000791;2.89e-37;18!CL:0000789;2.89e-37;18!CL:0002419;2.89e-37;18!CL:0000084;2.26e-26;25!CL:0000623;1.44e-22;3!CL:0000767;3.00e-21;3!CL:0000226;5.22e-21;3!CL:0000842;5.22e-21;3!CL:0000542;1.09e-10;53!CL:0000094;2.65e-08;8!CL:0002087;7.30e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,1.91e-62,11;CL:0000791,1.53e-37,18;CL:0000789,1.53e-37,18;CL:0002420,1.53e-37,18;CL:0002419,1.53e-37,18;CL:0000790,1.53e-37,18;CL:0000084,1.44e-26,25;CL:0000827,1.44e-26,25;CL:0000623,1.49e-22,3;CL:0000825,1.49e-22,3;CL:0000767,3.11e-21,3;CL:0000226,8.18e-21,3;CL:0000842,8.18e-21,3;CL:0000838,1.25e-20,52;CL:0000542,3.42e-20,53;CL:0000051,3.42e-20,53;CL:0000738,1.62e-16,136;CL:0002087,4.22e-14,115;CL:0000037,1.19e-12,168;CL:0000988,8.17e-12,177;CL:0002032,3.43e-09,161;CL:0000837,3.43e-09,161;CL:0002031,9.72e-09,120;CL:0000094,2.69e-08,8 | |||
|ontology_enrichment_development_v019=CL:0000790;2.89e-37;18!CL:0000051;1.09e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.03e-21!15;UBERON:0000179!1.03e-21!15;UBERON:0000463!1.03e-21!15;UBERON:0007023!3.27e-16!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.17e-43;15!UBERON:0000179;1.17e-43;15!UBERON:0000463;1.17e-43;15!UBERON:0002390;5.21e-19;32!UBERON:0002193;1.37e-10;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.73e-43,15;UBERON:0000179,1.73e-43,15;UBERON:0000463,1.73e-43,15 | |||
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| ||
|short_description=p5@LGR6 | |||
}} | }} |
Latest revision as of 20:17, 19 September 2015
Short description: | p5@LGR6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LGR6_5end |
Coexpression cluster: | C98_CD8_Natural_Basophils_blood_CD4_Peripheral_Whole |
Association with transcript: | -18bp_to_ENST00000255432, ENST00000367277_5end |
EntrezGene: | LGR6 |
HGNC: | 19719 |
UniProt: | Q5T508 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 1.91e-62 | 11 |
mature alpha-beta T cell | 1.53e-37 | 18 |
alpha-beta T cell | 1.53e-37 | 18 |
immature T cell | 1.53e-37 | 18 |
mature T cell | 1.53e-37 | 18 |
immature alpha-beta T cell | 1.53e-37 | 18 |
T cell | 1.44e-26 | 25 |
pro-T cell | 1.44e-26 | 25 |
natural killer cell | 1.49e-22 | 3 |
pro-NK cell | 1.49e-22 | 3 |
basophil | 3.11e-21 | 3 |
single nucleate cell | 8.18e-21 | 3 |
mononuclear cell | 8.18e-21 | 3 |
lymphoid lineage restricted progenitor cell | 1.25e-20 | 52 |
lymphocyte | 3.42e-20 | 53 |
common lymphoid progenitor | 3.42e-20 | 53 |
leukocyte | 1.62e-16 | 136 |
nongranular leukocyte | 4.22e-14 | 115 |
hematopoietic stem cell | 1.19e-12 | 168 |
hematopoietic cell | 8.17e-12 | 177 |
hematopoietic oligopotent progenitor cell | 3.43e-09 | 161 |
hematopoietic multipotent progenitor cell | 3.43e-09 | 161 |
hematopoietic lineage restricted progenitor cell | 9.72e-09 | 120 |
granulocyte | 2.69e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
blood | 1.73e-43 | 15 |
haemolymphatic fluid | 1.73e-43 | 15 |
organism substance | 1.73e-43 | 15 |