FFCP PHASE1:Hg19::chr1:205601000..205601055,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:205601000..205601055,- to FFCP PHASE1:Hg19::chr1:205601000..205601055,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2005 | |EntrezGene=2005 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3326 | |HGNC=3326 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000539916_5end | |||
|cluster_id=chr1:205601000..205601055,- | |||
|description=CAGE_peak_2_at_ELK4_5end | |||
|id=chr1:205601000..205601055,- | |||
|ontology_enrichment_celltype=CL:0000084!8.92e-08!25;CL:0000827!8.92e-08!25;CL:0000791!9.00e-08!18;CL:0000789!9.00e-08!18;CL:0002420!9.00e-08!18;CL:0002419!9.00e-08!18;CL:0000790!9.00e-08!18;CL:0000838!9.40e-08!52;CL:0000542!1.40e-07!53;CL:0000051!1.40e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000791;6.17e-08;18!CL:0000789;6.17e-08;18!CL:0002419;6.17e-08;18!CL:0000084;7.05e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,8.51e-08,52;CL:0000084,8.80e-08,25;CL:0000827,8.80e-08,25;CL:0000791,8.88e-08,18;CL:0000789,8.88e-08,18;CL:0002420,8.88e-08,18;CL:0002419,8.88e-08,18;CL:0000790,8.88e-08,18;CL:0000542,1.27e-07,53;CL:0000051,1.27e-07,53 | |||
|ontology_enrichment_development_v019=CL:0000790;6.17e-08;18 | |||
|ontology_enrichment_disease=DOID:0050687!1.04e-13!143;DOID:162!3.36e-13!235;DOID:14566!3.14e-12!239;DOID:305!4.26e-12!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.15e-13,143;DOID:162,4.17e-13,235;DOID:14566,4.11e-12,239;DOID:305,4.37e-12,106 | |||
|ontology_enrichment_uberon=UBERON:0001007!2.14e-09!155;UBERON:0001555!2.14e-09!155;UBERON:0007026!2.14e-09!155;UBERON:0004119!9.34e-08!169;UBERON:0000925!9.34e-08!169;UBERON:0006595!9.34e-08!169 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001007,1.60e-07,145;UBERON:0001555,1.60e-07,145;UBERON:0007026,1.60e-07,145 | |||
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| ||
|short_description=p2@ELK4 | |||
}} | }} |
Latest revision as of 03:24, 20 September 2015
Short description: | p2@ELK4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ELK4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000539916_5end |
EntrezGene: | ELK4 |
HGNC: | 3326 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 8.51e-08 | 52 |
T cell | 8.80e-08 | 25 |
pro-T cell | 8.80e-08 | 25 |
mature alpha-beta T cell | 8.88e-08 | 18 |
alpha-beta T cell | 8.88e-08 | 18 |
immature T cell | 8.88e-08 | 18 |
mature T cell | 8.88e-08 | 18 |
immature alpha-beta T cell | 8.88e-08 | 18 |
lymphocyte | 1.27e-07 | 53 |
common lymphoid progenitor | 1.27e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
digestive system | 1.60e-07 | 145 |
digestive tract | 1.60e-07 | 145 |
primitive gut | 1.60e-07 | 145 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.15e-13 | 143 |
cancer | 4.17e-13 | 235 |
disease of cellular proliferation | 4.11e-12 | 239 |
carcinoma | 4.37e-12 | 106 |