FFCP PHASE1:Hg19::chr1:86045826..86045843,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:86045826..86045843,+ to FFCP PHASE1:Hg19::chr1:86045826..86045843,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:86045826..86045843,+ | |||
|description=CAGE_peak_at_chr1:86045826..86045843,+ | |||
|id=chr1:86045826..86045843,+ | |||
|ontology_enrichment_celltype=CL:0000220!9.71e-13!246;CL:0000055!2.24e-12!180;CL:0002321!2.86e-12!248;CL:0000066!4.02e-11!254;CL:0000057!9.40e-10!75;CL:0000222!9.44e-10!119;CL:0000076!4.80e-09!62;CL:0002620!7.89e-09!23;CL:0000548!2.77e-08!679;CL:0000004!2.77e-08!679;CL:0000255!2.77e-08!679;CL:0000012!7.82e-08!682 | |||
|ontology_enrichment_celltype_v019=CL:0002620;4.20e-12;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,6.42e-12,23;CL:0000057,4.66e-09,76;CL:0000076,4.20e-08,63 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;3.41e-07;5!DOID:450;3.41e-07;5!DOID:66;3.41e-07;5!DOID:423;3.41e-07;5!DOID:0080000;3.41e-07;5!DOID:11722;3.41e-07;5!DOID:120;9.63e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:17,3.35e-07,5;DOID:450,3.35e-07,5;DOID:66,3.35e-07,5;DOID:423,3.35e-07,5;DOID:0080000,3.35e-07,5;DOID:11722,3.35e-07,5;DOID:120,9.17e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0000468!7.38e-09!659;UBERON:0002049!2.55e-08!79;UBERON:0007798!2.55e-08!79;UBERON:0000467!4.36e-08!625;UBERON:0000055!4.61e-08!69;UBERON:0000480!6.09e-08!626;UBERON:0000475!1.76e-07!365;UBERON:0003914!2.73e-07!118;UBERON:0000490!3.44e-07!138;UBERON:0001981!7.42e-07!60;UBERON:0007500!7.42e-07!60;UBERON:0004537!7.42e-07!60;UBERON:0006965!7.42e-07!60;UBERON:0003104!9.45e-07!238;UBERON:0009142!9.45e-07!238;UBERON:0002100!9.79e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;2.79e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,1.78e-09,41;UBERON:0002199,7.78e-08,46;UBERON:0002416,7.78e-08,46 | |||
|phase1_expression=1.81678379270557,2.5692062866918,1.26858963686374,1.0007329835313,0.446961094427288,1.74467704820074,0,0,0.261185628199839,0.491467873003018,0.697801167972428,0.436882744260345,0.527533956456907,0.123766352960047,0,0,1.80808358407193,1.46062018077475,0.487932798790507,1.23121058076788,0.204000691244253,1.88072832886853,0.286235987131057,0.410623275218653,1.75759695432724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0.50133791063589,0.434539556882471,0.795285947051099,2.43317435151318,0.756278537312543,0.665188192387692,1.05401742831751,0.130979075497713,0.364295288292542,0,0,0,0,0,0,0,1.78886166630035,0,2.42998351125316,1.69592382577203,0.419499436209906,0.825354125820202,0.835979866147242,0.258416759169329,0.35576626268671,2.00832367658802,1.61131726843659,2.28081631715554,1.46437234528902,2.20597848207521,0.81014194788176,0.982297011124877,0.673588117878509,1.57656072676651,0,0,0,0,0,0.436094052142534,0,1.01304409331664,8.60659675285922,3.15520282823695,0.709336764396714,0.560677600142307,0,0.24666754841716,0,0.134710672069688,0,0,0.576175924479999,0,0,0.570471821544449,1.34503812496621,0.23486899728753,0.161872944368132,1.12360645361799,0.816616685019573,0.122834317311768,0.206651562351531,1.18800285728205,0,5.46096817162816,0,0.168336113954066,0.250237039743928,2.49357703935765,0.438977620880838,0.612975591598039,0.300476117813194,0.226864366320042,4.48474089222155,1.06778694409284,1.27159140695737,3.30100205692843,1.95799805553034,2.83404594050192,0.930584281657949,4.72573730275545,1.26668106709558,3.28163906517349,2.02509777013059,0.646584227275248,8.52023022039874,1.61203357164224,1.3564847384839,0,0.818238361772504,0,0,0,0,0,0,0,0,1.28648187638577,0,2.3218396401599,2.88751792667834,1.0647612003586,0.842923450390509,0,0.992645754591546,1.08939722046203,0.237270619111097,1.61797569792197,1.96221465125346,0.38474715694639,0,0,0.8231480226628,0,0,0,0,0,0.122988438543114,0.686271241194102,0.219500570817251,1.1240175325762,0.100528972411631,0.462942225792648,0,0,1.44331342025273,0,0.587043471179108,1.15493158208859,2.31492756288305,0.761016608938393,0,0,0,0,0,0.93733833986777,0,0.425325291727159,0.179117045405697,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,1.12131084345361,0,0.51336800074665,0.258543431515556,0,0,1.06375246633948,0,0,0,0.532844358032199,1.42977993658148,0,1.64648067356154,0.977208552881205,1.42156779497018,1.58390374586686,0.904318131178758,0,0.299918973546171,0,0,0,0,1.14861935834114,4.27910715122155,1.44781306667579,0.821905290201534,0.358121926479791,0,0,0,0,0,0,0.773288812777695,0,0.637938751653163,0,0,0,0.24538298343828,0,0,1.03985430765404,0.356857977594324,1.41932173530541,2.81139395982512,0,0,0,0,0.368738337083406,0.260650843404249,0,0,0,0,0,0.606255142892519,0,0,2.48107807818777,5.67809301165831,1.12264037773229,1.40953064181271,0.511707249066704,1.44768529029247,0,0.308419387605311,0.532685175939381,1.06765302817952,0,0.464841513839837,0,0.802025881213139,0.276242966807689,0.459257792658427,0,0.262248829918848,0.451199612907412,0.462092022626489,0.784349769176855,0,0.316654886678627,0,0.510281115829547,0.215915916102139,0,0.812839312631559,0,0.509752546090077,0,0.671624264166535,0,0,0.769350375349168,0.328014645699706,0,0.103041011647722,0.366277859273374,1.07262349896764,1.72279661398852,0,0,0.096670718292122,0.770243085573222,0.460511024178389,0.413509717453592,0.429680979473094,0.290033387828457,0.426133137080504,0.356128142586949,0,0,1.02090169995667,0.10115778085555,0,7.870308670766,0,0.616067160352178,0.532306030317022,0,0.9266210955196,0.429374660225974,0.372158369359667,0,0.38126038784765,0.511795582622668,0.855877976067841,0.318203247925937,0.78494864019923,0.179872457583315,0.54907405947211,0.353437207037059,0.202182481573316,0,0,0.975267478179181,0.487426979262569,0,0.136499911407986,0,1.13008116620243,0.551365343546124,0.66343897524122,0,0.578775534266688,0,1.42037263873893,0.30982349809975,0,0.286822704408103,0.294747123039363,1.07001315444375,2.12856638442359,0.633322905892992,1.64647446479951,0,0,0.192444225451024,0,1.08890984861323,0.0941438007767792,0.43050537267123,0,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0.121360521749513,0,2.55722532125772,0,0.296964680832639,0.307160702099232,0,0,3.11664374064136,0,0,0.796991953004279,0.552567831062295,0,7.15880777515084,0,0.622079175323615,1.97710372524119,0.358042349351218,0,0.295930216910801,0,1.11136990144637,0,0.0927680981618513,0,0,0.437299999980979,0,0,0.762760950878299,0.236387681767936,0,0,0.173624994933292,0.885741385813839,0,0,0,0,0.219385397153973,1.19832309870889,1.95193241990045,0.384751292518985,1.25336261431701,0,0,0,1.5950057986596,1.19076871422421,1.06606955203727,0,0,0,0,0,0,0,0,0.2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| ||
|short_description=p@chr1:86045826..86045843,+ | |||
}} | }} |
Latest revision as of 10:52, 28 July 2015
Short description: | p@chr1:86045826..86045843, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:86045826..86045843, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 6.42e-12 | 23 |
fibroblast | 4.66e-09 | 76 |
squamous epithelial cell | 4.20e-08 | 63 |
Ontology term | p-value | n |
---|---|---|
skin of body | 1.78e-09 | 41 |
integument | 7.78e-08 | 46 |
integumental system | 7.78e-08 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 3.35e-07 | 5 |
myotonic disease | 3.35e-07 | 5 |
muscle tissue disease | 3.35e-07 | 5 |
myopathy | 3.35e-07 | 5 |
muscular disease | 3.35e-07 | 5 |
myotonic dystrophy | 3.35e-07 | 5 |
female reproductive organ cancer | 9.17e-07 | 27 |