FFCP PHASE1:Hg19::chr2:177001237..177001252,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:177001237..177001252,+ to FFCP PHASE1:Hg19::chr2:177001237..177001252,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3232 | |EntrezGene=3232 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5137 | |HGNC=5137 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-87bp_to_ENST00000459979,uc002ukr.2_5end | |||
|cluster_id=chr2:177001237..177001252,+ | |||
|description=CAGE_peak_5_at_HOXD3_5end | |||
|id=chr2:177001237..177001252,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002620;4.51e-08;23!CL:0002567;9.97e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,4.84e-08,23;CL:0002567,6.71e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006241;9.97e-07;3!UBERON:0003057;9.97e-07;3 | |||
|ontology_enrichment_disease=DOID:0050687!7.15e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002465!6.85e-08!10;UBERON:0005156!1.36e-07!59;UBERON:0000990!1.36e-07!59;UBERON:0003133!3.81e-07!48;UBERON:0001473!4.47e-07!8;UBERON:0004536!4.47e-07!8;UBERON:0006558!4.47e-07!8;UBERON:0000489!5.62e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0002240;9.97e-07;3!UBERON:0005174;9.97e-07;3!UBERON:0001137;9.97e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,6.71e-07,3;UBERON:0005174,6.71e-07,3;UBERON:0001137,6.71e-07,3 | |||
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|phase1_expression=0.54503513781167,0.214100523890983,0.281908808191942,0,0,0.872338524100369,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,1.01392563272577,0,0,0,0,0,0.916853528483988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03366703667732,1.42306505074684,0.66944122552934,0.805658634218294,0.760272105718513,0,0,0,0.535798369704479,1.34717623575702,0.900891843866578,0,0.949265659568129,0.366403487860815,0,0,0,0.993943903390637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469737994575059,0.485618833104395,0,0,0,0,0,0,0.910161361938026,0.718618141816238,0,0,0,0,0,0,0,1.25572744982203,1.2813443329114,0,0.900273288253207,0.103052529238439,3.34932702059318,1.11670113798954,1.35021065793013,0.487185025805993,1.51460264546469,0.828449087780694,0,1.42003837006646,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337169380156203,0.964044119533928,0.330881918197182,0.435758888184812,0.237270619111097,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0.4115740113314,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0.433099343283221,0.462985512576611,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0.444485260045183,0.763976851116555,2.34434894420094,1.71072446022705,0.205654985406647,0.901029173531752,0,0,0,0,0.387815147273333,0,0,0.26593811658487,1.04007436911366,0,0,0,0,0.542621605391443,0.823240336780769,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0.460385919864187,0.561320188866147,0.128139149255701,0,0,1.48418066444991,0,0.355123450626254,0.0821271560138091,0,0.348631135379878,0.725156697549733,0,0.276242966807689,0,0,0.393373244878272,0.451199612907412,0.231046011313244,0,0,0.105551628892876,0,0.340187410553031,0.431831832204279,1.54227252690289,0,0.501689773854853,0,0,0.671624264166535,0,0,0,0,0,0,0.54941678891006,0.082509499920588,0,0,0,0.193341436584244,0.616194468458578,0.15350367472613,0.137836572484531,0.537101224341368,0.290033387828457,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0.353437207037059,0.202182481573316,0,0,0,0,0,0,0.141405431953713,0,0.551365343546124,0,0,0,0,0,0,0,0,0.196498082026242,0,0.354761064070598,0.844430541190656,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17206543417515,0,0,0.568272293612826,0,0.296964680832639,0,0,0,0,0,0,1.59398390600856,0.828851746593443,0,0,0,0.622079175323615,0,0,0,0.295930216910801,0,0,0,0,0,0,0,2.17499872630438,0,0,0.709163045303809,1.37897349296586,1.74962768029953,0.520874984799877,0,0,0,0,0,0,0,0.139423744278603,1.23120413606075,0,0,0,1.73835795075213,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0.282706142867882,3.89499551535764,5.97157158647103,0.619202951523374,1.22206028986725,0,0,0,0,1.60515529459758,0,0,0,0,0.789168805698781,0,0,0.252746318513952,0,0.622129148383483,0,0,0,0,0.284609546029793,0.554698692052555,1.56203764501618,0.195984794828755,0,2.97035336011451,0.687944129886466,0,0,0,0,2.55942767405351,0.225980740780532,0,0,0,0.782205530939212,0,0.426905989478705,0,0.288180834308212,0,0,0,0,0,0.271808412147228,0.209205692624666,0.203996435272644,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0.717873024576814,0.798716001995964,0,0,0.0671834724867263,0.360299883542404,1.16495949527454,0,0,0,0.984274815147488,0,0,0,0,0,0,0,0,0,0,0.394028536495991,1.88836517285993,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0.170388021785422,0.566560457600628,0,0,0,0,0.171086837884329,0,0,0,0,0.496166021811951,0,0,0.638341257770182,1.08803560673895,1.0027595760908,0.612691153526923,0,0.471162288750703,0,0,0,0,0.110929051536852,0.124192805882767,0,0,0.303298235083296,0.285465333544967,0,0.468334905806882,0.579684114443301,0.149254802886874,0.233713309847224,1.10961172300523,0,0,0.889811221596536,0,0,0,0,0.318593534327405,0,0.621051827505038,0.829412415681711,0,0,0,0,0,0,0.214821114084977,0.464033759878494,0.398095888698616,0,0.343395705182793,0.673498977531838,0,0.192619830407303,0,0,0.453411851024545,0,0,0.358177682162975,0,0.877136198314828,0,0,0,0,0,0.607719912354764,0,0,0,0,0.327609848846413,0.737318726261158,0,0,0,0,0,0.736423801007363,0,0,0.383683113910955,0.215649622793364,0.943595651135378,0.436838552768056,0.169732529954025,0,1.23935764259002,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471878893390961,0,0,0,0,0.397832444232549,1.20336525358812,0,0.781514011233092,0,0,0,0,0,0,0.0634158101939068,0,0,1.48863353516788,0.175871244359621,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0.222462803784138,0.235479278551542,0,0,0.913158720509496,0.215927591218621,0.47775168788705,0,0,0,2.08629926763095,0,0,0,0,0,0.236664001461131,0.426067023795788,0.8467741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| ||
|short_description=p5@HOXD3 | |||
}} | }} |
Latest revision as of 09:16, 18 September 2015
Short description: | p5@HOXD3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_HOXD3_5end |
Coexpression cluster: | NA |
Association with transcript: | -87bp_to_ENST00000459979, uc002ukr.2_5end |
EntrezGene: | HOXD3 |
HGNC: | 5137 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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skin fibroblast | 4.84e-08 | 23 |
light melanocyte | 6.71e-07 | 3 |
Ontology term | p-value | n |
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spinal cord | 6.71e-07 | 3 |
dorsal region element | 6.71e-07 | 3 |
dorsum | 6.71e-07 | 3 |