FFCP PHASE1:Hg19::chr2:30864583..30864594,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=253558 | |EntrezGene=253558 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=26756 | |HGNC=26756 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=110bp_to_AK023269_5end | |||
|cluster_id=chr2:30864583..30864594,+ | |||
|description=CAGE_peak_18_at_LCLAT1_5end | |||
|id=chr2:30864583..30864594,+ | |||
|ontology_enrichment_celltype=CL:0002368!9.53e-08!13;CL:0002076!5.17e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0000333;4.21e-21;5!CL:0000062;2.45e-12;9!CL:0002321;5.55e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000062,2.37e-10,11;CL:0000375,2.37e-10,11;CL:0000335,2.37e-10,11 | |||
|ontology_enrichment_development_v019=CL:0000335;2.37e-10;11 | |||
|ontology_enrichment_disease=DOID:171!3.44e-18!10;DOID:169!7.07e-13!6;DOID:3095!1.10e-11!22;DOID:2994!1.10e-11!22;DOID:0050687!1.65e-09!143;DOID:14566!3.35e-09!239;DOID:162!3.54e-08!235;DOID:3910!2.25e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:3347;2.55e-98;1!DOID:169;7.67e-18;6!DOID:201;9.07e-18;6!DOID:0060100;9.07e-18;6!DOID:171;2.73e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,2.55e-98,1;DOID:169,7.67e-18,6;DOID:201,9.07e-18,6;DOID:0060100,9.07e-18,6;DOID:171,2.73e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0000013!2.94e-10!5;UBERON:0002410!2.94e-10!5;UBERON:0000010!3.77e-08!8;UBERON:0004903!2.25e-07!2;UBERON:0002173!2.25e-07!2;UBERON:0002186!2.25e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;4.21e-21;5!UBERON:0002410;4.21e-21;5!UBERON:0000010;2.19e-12;8!UBERON:0001474;7.60e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,4.21e-21,5;UBERON:0002410,4.21e-21,5;UBERON:0000010,2.19e-12,8 | |||
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| ||
|short_description=p18@LCLAT1 | |||
}} | }} |
Latest revision as of 22:17, 16 September 2015
Short description: | p18@LCLAT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_LCLAT1_5end |
Coexpression cluster: | NA |
Association with transcript: | 110bp_to_AK023269_5end |
EntrezGene: | LCLAT1 |
HGNC: | 26756 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteoblast | 2.37e-10 | 11 |
osteoprogenitor cell | 2.37e-10 | 11 |
mesenchyme condensation cell | 2.37e-10 | 11 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 4.21e-21 | 5 |
autonomic nervous system | 4.21e-21 | 5 |
peripheral nervous system | 2.19e-12 | 8 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 2.55e-98 | 1 |
neuroendocrine tumor | 7.67e-18 | 6 |
connective tissue cancer | 9.07e-18 | 6 |
musculoskeletal system cancer | 9.07e-18 | 6 |
neuroectodermal tumor | 2.73e-11 | 10 |