FFCP PHASE1:Hg19::chr3:112359358..112359370,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:112359358..112359370,- to FFCP PHASE1:Hg19::chr3:112359358..112359370,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=151887 | |EntrezGene=151887 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=30649 | |HGNC=30649 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=73bp_to_AY726593_5end | |||
|cluster_id=chr3:112359358..112359370,- | |||
|coexpression_cluster_id=C333 | |||
|description=CAGE_peak_26_at_CCDC80_5end | |||
|id=chr3:112359358..112359370,- | |||
|ontology_enrichment_celltype=CL:0000055!1.60e-24!180;CL:0000057!1.65e-14!75;CL:0000680!6.46e-12!57;CL:0000056!6.46e-12!57;CL:0000355!6.46e-12!57;CL:0000187!2.19e-10!54;CL:0000183!4.60e-09!59;CL:0000192!5.26e-09!42;CL:0000514!5.26e-09!42;CL:0000359!2.42e-08!32;CL:0000393!3.50e-08!60;CL:0000211!3.50e-08!60;CL:0002494!5.13e-08!16;CL:0000136!1.57e-07!15;CL:0002334!3.19e-07!12;CL:0002620!7.37e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;7.64e-14;23!CL:1000306;1.33e-09;4!CL:0002547;1.33e-09;4!CL:0002580;7.43e-08;3!CL:0002579;7.85e-08;3!CL:0000057;8.88e-08;73!CL:0002615;1.07e-07;3!CL:0002494;3.32e-07;16!CL:0000135;7.01e-07;3!CL:0000388;7.01e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.21e-22,76;CL:0002620,5.99e-14,23;CL:0000048,1.41e-10,427;CL:0000723,3.60e-10,433;CL:1000306,7.90e-10,4;CL:0002547,7.90e-10,4;CL:0000034,1.21e-09,441;CL:0002580,6.57e-08,3;CL:0002579,9.99e-08,3;CL:0002615,1.51e-07,3;CL:0000136,1.81e-07,15;CL:0002494,3.16e-07,16;CL:0000135,6.58e-07,3;CL:0000388,6.58e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;4.39e-10;5!DOID:450;4.39e-10;5!DOID:66;4.39e-10;5!DOID:423;4.39e-10;5!DOID:0080000;4.39e-10;5!DOID:11722;4.39e-10;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,5.99e-10,5;DOID:450,5.99e-10,5;DOID:66,5.99e-10,5;DOID:423,5.99e-10,5;DOID:0080000,5.99e-10,5;DOID:11722,5.99e-10,5 | |||
|ontology_enrichment_uberon=UBERON:0002385!1.79e-11!63;UBERON:0001015!1.79e-11!63;UBERON:0000383!1.79e-11!63;UBERON:0001134!4.43e-11!61;UBERON:0002036!4.43e-11!61;UBERON:0003082!4.43e-11!61;UBERON:0004290!6.27e-10!70;UBERON:0000914!1.19e-09!83;UBERON:0002329!1.19e-09!83;UBERON:0003077!1.19e-09!83;UBERON:0003059!1.19e-09!83;UBERON:0007282!1.19e-09!83;UBERON:0009618!1.19e-09!83;UBERON:0007285!1.19e-09!83;UBERON:0004872!1.55e-09!84;UBERON:0000486!3.78e-09!82;UBERON:0000948!3.57e-08!24;UBERON:0005498!3.57e-08!24;UBERON:0004140!3.57e-08!24;UBERON:0009881!3.57e-08!24;UBERON:0004141!3.57e-08!24;UBERON:0003084!3.57e-08!24;UBERON:0007005!3.57e-08!24;UBERON:0004139!3.57e-08!24;UBERON:0004291!3.57e-08!24;UBERON:0007100!2.76e-07!27;UBERON:0001637!4.09e-07!42;UBERON:0003509!4.09e-07!42;UBERON:0004572!4.09e-07!42;UBERON:0002049!5.81e-07!79;UBERON:0007798!5.81e-07!79;UBERON:0003688!6.81e-07!6;UBERON:0002358!6.81e-07!6;UBERON:0003684!6.81e-07!6;UBERON:0001178!6.81e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;7.34e-14;6!UBERON:0002358;7.34e-14;6!UBERON:0003684;7.34e-14;6!UBERON:0001178;7.34e-14;6!UBERON:0004797;1.33e-09;4!UBERON:0000415;1.33e-09;4!UBERON:0007240;1.33e-09;4!UBERON:0005742;1.33e-09;4!UBERON:0005734;1.33e-09;4!UBERON:0004664;1.33e-09;4!UBERON:0004663;1.33e-09;4!UBERON:0002097;3.83e-09;41!UBERON:0004457;6.60e-09;9!UBERON:0000042;6.60e-09;9!UBERON:0002199;2.37e-07;46!UBERON:0002416;2.37e-07;46!UBERON:0007846;7.01e-07;3!UBERON:0000043;7.01e-07;3!UBERON:0007845;7.01e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.31e-13,6;UBERON:0002358,1.31e-13,6;UBERON:0003684,1.31e-13,6;UBERON:0001178,1.31e-13,6;UBERON:0002097,2.90e-11,41;UBERON:0004872,4.41e-10,83;UBERON:0000415,7.90e-10,4;UBERON:0007240,7.90e-10,4;UBERON:0005742,7.90e-10,4;UBERON:0005734,7.90e-10,4;UBERON:0004664,7.90e-10,4;UBERON:0004663,7.90e-10,4;UBERON:0002199,1.52e-09,46;UBERON:0002416,1.52e-09,46;UBERON:0004797,3.46e-08,7;UBERON:0001637,2.15e-07,42;UBERON:0003509,2.15e-07,42;UBERON:0004572,2.15e-07,42;UBERON:0007846,6.58e-07,3;UBERON:0000043,6.58e-07,3;UBERON:0007845,6.58e-07,3;UBERON:0000948,9.75e-07,24;UBERON:0005498,9.75e-07,24;UBERON:0004140,9.75e-07,24;UBERON:0009881,9.75e-07,24;UBERON:0004141,9.75e-07,24;UBERON:0003084,9.75e-07,24;UBERON:0007005,9.75e-07,24;UBERON:0004139,9.75e-07,24;UBERON:0004291,9.75e-07,24 | |||
|phase1_expression=1.2717486548939,2.14100523890983,5.3562673556469,2.00146596706261,3.12872766099101,2.61701557230111,0,0.631719873426831,0.783556884599516,0,0,1.74753097704138,1.58260186937072,0.123766352960047,0.331397375727916,0,0,0,0.975865597581014,0.984968464614303,0.612002073732759,0.313454721478088,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,1.66221330396589,0.361439152384566,2.00535164254356,1.44846518960824,0,0.973269740605272,0.283604451492204,0,0.263504357079378,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48485975847659,5.31848148991235,6.88527740228738,8.60509862246441,1.77334191099179,2.80338800071154,0,2.22000793575444,2.48968828319813,0.269421344139376,0.163461903113459,1.05950199351452,1.15235184896,0,0,0,0,0,0,0.140450806702248,0,0,0.206651562351531,0,0.741800787835671,0.910161361938026,0.718618141816238,0,0,0.277064115484183,0,0,0.300476117813194,0.680593098960126,2.87023417102179,1.06778694409284,1.27159140695737,3.00091096084402,1.13357782162283,1.28820270022815,1.30281799432113,4.05063197379039,1.36411807225678,1.26216887122057,2.85354685791128,0.646584227275248,3.90510551768276,1.61203357164224,1.18692414617341,0.193260853163297,0,0,0,0,0,0.10366105501537,0,0,0,0.643240938192885,1.38134921352481,0.464367928031979,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,1.2347220339942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,2.23076519048061,0.144366447761074,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0.224262168690721,0.87192013766656,0.36669142910475,2.84397774667111,0,0,0.531876233169741,0,0.514414748524284,0,0,0.714889968290738,0,2.46972101034231,0.65147236858747,1.06617584622764,0,0.904318131178758,0.871533458600294,0.499864955910285,0,0,0,0.958499421966331,0,1.42636905040718,3.04040744001916,0.61642896765115,1.07436577943937,0,0,0,0,0.76228387266739,0,0,0,0,0,0,0,0.613457458595699,0.500170521059677,0,0.623912584592421,1.42743191037729,0.473107245101804,0.35142424497814,0.902838299183157,2.27407504055985,1.03473071292505,0,0,0.521301686808497,0.195801157462741,0,0,0,0,0,14.9791895559447,2.72151263996712,3.2254015016441,4.45039722535381,3.64858122762996,10.7636885374789,2.04682899626681,5.79074116116987,0,0.154209693802656,0.710246901252508,0.246381468041427,0.519254429183621,0.348631135379878,0,0,0,1.49258782613989,0.182091168006717,1.57349297951309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0,0.082509499920588,0,0,3.21367859688319,0,0.154048617114644,0.307007349452259,0,0.429680979473094,0.870100163485371,0,0.445160178233687,0,0,0,0,0,15.1109926478707,0.6970372701606,0.308033580176089,1.06461206063404,0,1.66791797193528,1.00187420719394,0.744316738719335,0,0.762520775695299,0,0.855877976067841,0.318203247925937,0,0.359744915166629,0.54907405947211,0.471249609382746,1.01091240786658,3.17020642346017,0.842516912477962,0.975267478179181,1.21856744815642,1.05650146756755,0.9554993798559,1.27264888758341,1.13008116620243,0,0.66343897524122,0.438450885253763,0,0,2.63783490051515,0,0.563391205064483,0.573645408816206,2.25972794330179,2.85336841185,0,0.633322905892992,0.987884678879706,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.593929361665277,0,0,0,0.667852230137435,0,0,0.796991953004279,0.276283915531148,0,0,0,2.48831670129446,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331737779793674,0,0,0,0,0.769502585037971,0,0,0.0897576444097721,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0.649165919226273,0,0.176915129006678,0,0,0,0,0.067401132980677,0.802577647298789,0.234264445725339,0,0,0,0.394584402849391,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0.522355239482415,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0.19871461170299,0.126621591911757,0,0.0801588202515337,0.213452994739353,0,0,0.114536596165916,0,0,0.248505071130865,0,0,0,0.509991088181609,0.288950589901519,0,0.136905378891993,0,0.429765441419957,0,2.51354161145029,0.229160424011684,0,0.199679000498991,0,0,0.201550417460179,3.24269895188163,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0.542999601753713,0.864221491201268,1.63293680054705,0,0,0.511164065356265,0,0,0,0.129282956361551,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0.2506898940227,0.612691153526923,0.327872630709804,0,0,0.122026264901963,0,0,0.221858103073705,0.248385611765534,0,0,0,0,0,0,0,0.597019211547496,2.10341978862502,2.77402930751307,1.51522404220071,2.26411111577318,0.889811221596536,2.51724075236616,2.57092570397506,0.466311601748341,0.591420599958536,0.159296767163702,0,0.465788870628778,1.24411862352257,1.59505028734797,0,1.35231848097497,3.04644169735036,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| 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| ||
|short_description=p26@CCDC80 | |||
}} | }} |
Latest revision as of 14:28, 19 September 2015
Short description: | p26@CCDC80 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_26_at_CCDC80_5end |
Coexpression cluster: | C333_Fibroblast_Smooth_Preadipocyte_Adipocyte_Ewing_Placental_sacrococcigeal |
Association with transcript: | 73bp_to_AY726593_5end |
EntrezGene: | CCDC80 |
HGNC: | 30649 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.21e-22 | 76 |
skin fibroblast | 5.99e-14 | 23 |
multi fate stem cell | 1.41e-10 | 427 |
somatic stem cell | 3.60e-10 | 433 |
fibroblast of tunica adventitia of artery | 7.90e-10 | 4 |
fibroblast of the aortic adventitia | 7.90e-10 | 4 |
stem cell | 1.21e-09 | 441 |
preadipocyte of the breast | 6.57e-08 | 3 |
omentum preadipocyte | 9.99e-08 | 3 |
adipocyte of omentum tissue | 1.51e-07 | 3 |
fat cell | 1.81e-07 | 15 |
cardiocyte | 3.16e-07 | 16 |
fibrocyte | 6.58e-07 | 3 |
tendon cell | 6.58e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.31e-13 | 6 |
peritoneum | 1.31e-13 | 6 |
abdominal cavity | 1.31e-13 | 6 |
visceral peritoneum | 1.31e-13 | 6 |
skin of body | 2.90e-11 | 41 |
splanchnic layer of lateral plate mesoderm | 4.41e-10 | 83 |
artery wall | 7.90e-10 | 4 |
tunica adventitia of artery | 7.90e-10 | 4 |
adventitia | 7.90e-10 | 4 |
tunica adventitia of blood vessel | 7.90e-10 | 4 |
aorta tunica adventitia | 7.90e-10 | 4 |
aorta wall | 7.90e-10 | 4 |
integument | 1.52e-09 | 46 |
integumental system | 1.52e-09 | 46 |
blood vessel layer | 3.46e-08 | 7 |
artery | 2.15e-07 | 42 |
arterial blood vessel | 2.15e-07 | 42 |
arterial system | 2.15e-07 | 42 |
dense regular connective tissue | 6.58e-07 | 3 |
tendon | 6.58e-07 | 3 |
regular connective tissue | 6.58e-07 | 3 |
heart | 9.75e-07 | 24 |
primitive heart tube | 9.75e-07 | 24 |
primary heart field | 9.75e-07 | 24 |
anterior lateral plate mesoderm | 9.75e-07 | 24 |
heart tube | 9.75e-07 | 24 |
heart primordium | 9.75e-07 | 24 |
cardiac mesoderm | 9.75e-07 | 24 |
cardiogenic plate | 9.75e-07 | 24 |
heart rudiment | 9.75e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 5.99e-10 | 5 |
myotonic disease | 5.99e-10 | 5 |
muscle tissue disease | 5.99e-10 | 5 |
myopathy | 5.99e-10 | 5 |
muscular disease | 5.99e-10 | 5 |
myotonic dystrophy | 5.99e-10 | 5 |