FFCP PHASE1:Hg19::chr3:42201673..42201718,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:42201673..42201718,+ to FFCP PHASE1:Hg19::chr3:42201673..42201718,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22906 | |EntrezGene=22906 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29947 | |HGNC=29947 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000469506_5end | |||
|cluster_id=chr3:42201673..42201718,+ | |||
|description=CAGE_peak_2_at_TRAK1_5end | |||
|id=chr3:42201673..42201718,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.99e-23!254;CL:0002076!8.83e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0002139;8.27e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.00e-26,253;CL:0000223,4.86e-08,58;CL:0002076,7.72e-08,42;CL:0002139,7.64e-07,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.44e-12!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.80e-14,106;DOID:0050687,6.03e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!5.17e-14!169;UBERON:0000925!5.17e-14!169;UBERON:0006595!5.17e-14!169;UBERON:0001007!5.54e-11!155;UBERON:0001555!5.54e-11!155;UBERON:0007026!5.54e-11!155;UBERON:0004921!4.45e-10!129;UBERON:0004185!4.45e-10!129;UBERON:0000481!4.82e-10!347;UBERON:0001004!7.73e-10!72;UBERON:0000464!1.65e-09!104;UBERON:0000077!7.08e-09!130;UBERON:0000477!1.15e-08!286;UBERON:0000065!2.64e-08!53;UBERON:0000466!3.25e-08!126;UBERON:0004111!4.95e-08!241;UBERON:0000119!6.20e-08!312;UBERON:0000483!2.20e-07!309;UBERON:0001048!2.24e-07!168;UBERON:0008947!3.50e-07!38;UBERON:0003258!3.50e-07!38;UBERON:0003104!3.57e-07!238;UBERON:0009142!3.57e-07!238;UBERON:0001041!5.65e-07!98;UBERON:0000063!7.10e-07!97 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,6.39e-14,160;UBERON:0000925,6.39e-14,160;UBERON:0006595,6.39e-14,160;UBERON:0001007,4.07e-11,145;UBERON:0001555,4.07e-11,145;UBERON:0007026,4.07e-11,145;UBERON:0004921,1.16e-10,118;UBERON:0001004,8.11e-10,74;UBERON:0000065,1.33e-08,54;UBERON:0005177,3.51e-08,101;UBERON:0008947,9.09e-08,38;UBERON:0003258,9.09e-08,38;UBERON:0001041,1.02e-07,87;UBERON:0005178,3.53e-07,34;UBERON:0002224,3.53e-07,34 | |||
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| ||
|short_description=p2@TRAK1 | |||
}} | }} |
Latest revision as of 05:59, 18 September 2015
Short description: | p2@TRAK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TRAK1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000469506_5end |
EntrezGene: | TRAK1 |
HGNC: | 29947 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.00e-26 | 253 |
endodermal cell | 4.86e-08 | 58 |
endo-epithelial cell | 7.72e-08 | 42 |
endothelial cell of vascular tree | 7.64e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 6.39e-14 | 160 |
endoderm | 6.39e-14 | 160 |
presumptive endoderm | 6.39e-14 | 160 |
digestive system | 4.07e-11 | 145 |
digestive tract | 4.07e-11 | 145 |
primitive gut | 4.07e-11 | 145 |
subdivision of digestive tract | 1.16e-10 | 118 |
respiratory system | 8.11e-10 | 74 |
respiratory tract | 1.33e-08 | 54 |
trunk region element | 3.51e-08 | 101 |
respiratory primordium | 9.09e-08 | 38 |
endoderm of foregut | 9.09e-08 | 38 |
foregut | 1.02e-07 | 87 |
thoracic cavity element | 3.53e-07 | 34 |
thoracic cavity | 3.53e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.80e-14 | 106 |
cell type cancer | 6.03e-08 | 143 |