FFCP PHASE1:Hg19::chr3:56802693..56802695,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:56802693..56802695,- to FFCP PHASE1:Hg19::chr3:56802693..56802695,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:56802693..56802695,- | |||
|description=CAGE_peak_at_chr3:56802693..56802695,- | |||
|id=chr3:56802693..56802695,- | |||
|ontology_enrichment_celltype=CL:0000791!2.38e-10!18;CL:0000789!2.38e-10!18;CL:0002420!2.38e-10!18;CL:0002419!2.38e-10!18;CL:0000790!2.38e-10!18;CL:0000542!3.30e-10!53;CL:0000051!3.30e-10!53;CL:0000625!3.87e-10!11;CL:0000838!1.66e-09!52;CL:0000084!3.09e-07!25;CL:0000827!3.09e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0002591;9.72e-14;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,2.07e-13,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.13e-15!115;UBERON:0001049!1.77e-12!57;UBERON:0005068!1.77e-12!57;UBERON:0006241!1.77e-12!57;UBERON:0007135!1.77e-12!57;UBERON:0002346!1.20e-10!90;UBERON:0003075!2.55e-10!86;UBERON:0007284!2.55e-10!86;UBERON:0002616!9.84e-10!59;UBERON:0001893!1.49e-09!34;UBERON:0002020!1.65e-09!34;UBERON:0003528!1.65e-09!34;UBERON:0003080!2.69e-09!42;UBERON:0002791!6.19e-09!33;UBERON:0002619!1.18e-08!22;UBERON:0002780!1.40e-08!41;UBERON:0001890!1.40e-08!41;UBERON:0006240!1.40e-08!41;UBERON:0001950!1.45e-08!20;UBERON:0001869!1.56e-08!32;UBERON:0000955!1.07e-07!69;UBERON:0006238!1.07e-07!69;UBERON:0001017!1.30e-07!82;UBERON:0005743!2.63e-07!86;UBERON:0000956!3.83e-07!25;UBERON:0000203!3.83e-07!25;UBERON:0003056!6.77e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0000029;3.50e-14;1!UBERON:0000078;1.64e-07;2!UBERON:0002012;1.64e-07;2!UBERON:0008886;1.64e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,3.50e-14,1;UBERON:0000078,2.40e-07,2;UBERON:0007497,2.40e-07,2;UBERON:0003643,2.40e-07,2;UBERON:0003504,2.40e-07,2;UBERON:0003469,2.40e-07,2;UBERON:0003496,2.40e-07,2;UBERON:0002012,2.40e-07,2;UBERON:0008886,2.40e-07,2;UBERON:0007303,2.40e-07,2;UBERON:0002061,2.40e-07,2;UBERON:0005432,2.40e-07,2;UBERON:0004363,2.40e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.236132343941038,0,0,0,0,0,0,0.0774672005803016,0.142169232487422,0,0,0,0.434021741431704,0,0,0,0.145398238779565,0,0.970336244751265,0,0,0,0,0,0.236482229888585,0,0,0,0,0.272906150057846,0,0,0,0,0,0.199463657621632,0.852449501065388,0,0,0,0.251248665256743,0,0,0,0,0,0.211255286311942,0,0,0,0,0.16072558669708,0,0,0,0,0,0.889509253863555,0,0,0,0.661044872784862,0,1.1384259382189,0.587237189370939,0,0,0,0,0.393419540227666,0,0.205601498999509,0.167186495390678,0.32592226663359,0,0,0.111410456885174,0.294605907474837,0.221533894583621,0,1.66518715643378,1.95089021339817,1.15106533222573,2.21080014228679,0,0.14828656316206,0,0,0.453237370790265,0,0.34362744548263,0,0.637130828648193,0.651083453856419,1.90090408889675,0.301150238155546,0.255973222308837,2.49861453104692,0.473554504088034,0,0.201606743224732,0.802320587350522,0.434473211648397,0,0,0,0,0,0,0,0,0.283604451492204,0.443458794925128,0.43917392846563,0.392937226493138,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0.56530794192401,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0.573673241497627,0,0,0,0,0,0,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297262324577456,0,0.16798212819886,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.431255149719035,0.898401253958239,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.413536052245775,0.215714200818617,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,1.19115887728894,0.411362273086194,0,0.540031437238115,0.79312517629427,0,0,0,0.743212700502875,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0.1605880751037,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.422008249231538,0,0.16480387422676,0.211125408127993,0,0.276283915531148,0,0,0,0,0,0.179021174675609,0.511572370226872,0,0,0,0,0,1.99613798001194,0,0,0.724999575434793,0.1137934482855,0,0,0,0,0.868124974666461,0,0.361789315876224,0,0.442317039724898,0.886642856860642,0.219385397153973,0,0.278847488557207,0,0.113942055847001,0,0,0.108647371922008,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0.652931232636591,0,0.216388639742091,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0.182454789215666,0,0.485560759068186,0.394584402849391,0,0.61214552326098,0,0,0,0,0.330991955875499,0,0,0,0,0,0.0979923974143777,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0.640358984218058,0.19980960958213,0,0,0,0,0.124252535565433,0.235694034616795,0,0,0,0,0.600420288709789,0.410716136675979,0,0,0,0.279282401272254,0.229160424011684,0,0.199679000498991,0,0,0.0671834724867263,0,0,0.0787831823072236,0.164831716762333,0,0.0984274815147488,0,0,0.272406812223151,0,0,0,0,0,0.0607495566580247,0.335434687599266,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,1.32506888912221,0.129282956361551,0.13223260174269,0,0,0.106787412567695,0.314408610199332,0.414239055347196,2.48083010905975,0.592834895693833,0,0,0,0,0,0,0,0,0.122026264901963,0.500763722825999,1.14681839138014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.967809053062115,0,0,0.163565394255844,0,0.245772908753719,0,0,0.106691729694141,0,0,0.368211900503681,0,0,0,0.107824811396682,0,0,0,0.212574920101683,0.123935764259002,0,0,0,0,0,0,0,1.41696576325585,0.319267718114302,0.41023272848151,0,0.0691572524642179,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,1.56302802246618,0,0,0.147856086217045,0.270150338473579,0,0.206686796501184,0,0.546974809018219,0,0.992422356778588,0,0,0,0.336283722218824,0,0,0,0,0,0.203909198930495,0.328863867814245,0,0,0,0,0,0,0,0,0.0714765441766563,0,0.697448552208751,0,0,0,0,0,0,0.118332000730565,0,0.846774100381858,0.22910686854405,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0.22589216407792,0,0.150962843566674,0,0.218559560503957,0,0,0,0,0.297046400327086,1.2679671827502,0,0,0,0.499705779624645,0,0,0,0.730336388246517,0.458729283404541,0.286679166302903,0.157771562193185,0.0679914901909147,0,0,0,0,0,0,0,0.253397002022874,0.101988829741982,0,0,0,0.0757786982182394,0.535928260312357,0,0.103432995861895,0.213233981900981,0.23806443146374,0.129177819672012,0.124149428591716,0,0,0.808468755832877,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0.402547587182052,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.236132343941038,0,0,0,0,0,0,0.0774672005803016,0.142169232487422,0,0,0,0.434021741431704,0,0,0,0.145398238779565,0,0.970336244751265,0,0,0,0,0,0.236482229888585,0,0,0,0,0.272906150057846,0,0,0,0,0,0.199463657621632,0.852449501065388,0,0,0,0.251248665256743,0,0,0,0,0,0.211255286311942,0,0,0,0,0.16072558669708,0,0,0,0,0,0.889509253863555,0,0,0,0.661044872784862,0,1.1384259382189,0.587237189370939,0,0,0,0,0.393419540227666,0,0.205601498999509,0.167186495390678,0.32592226663359,0,0,0.111410456885174,0.294605907474837,0.221533894583621,0,1.66518715643378,1.95089021339817,1.15106533222573,2.21080014228679,0,0.14828656316206,0,0,0.453237370790265,0,0.34362744548263,0,0.637130828648193,0.651083453856419,1.90090408889675,0.301150238155546,0.255973222308837,2.49861453104692,0.473554504088034,0,0.201606743224732,0.802320587350522,0.434473211648397,0,0,0,0,0,0,0,0,0.283604451492204,0.443458794925128,0.43917392846563,0.392937226493138,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0.56530794192401,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0.573673241497627,0,0,0,0,0,0,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297262324577456,0,0.16798212819886,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.431255149719035,0.898401253958239,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.413536052245775,0.215714200818617,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,1.19115887728894,0.411362273086194,0,0.540031437238115,0.79312517629427,0,0,0,0.743212700502875,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0.1605880751037,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.422008249231538,0,0.16480387422676,0.211125408127993,0,0.276283915531148,0,0,0,0,0,0.179021174675609,0.511572370226872,0,0,0,0,0,1.99613798001194,0,0,0.724999575434793,0.1137934482855,0,0,0,0,0.868124974666461,0,0.361789315876224,0,0.442317039724898,0.886642856860642,0.219385397153973,0,0.278847488557207,0,0.113942055847001,0,0,0.108647371922008,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0.652931232636591,0,0.216388639742091,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0.182454789215666,0,0.485560759068186,0.394584402849391,0,0.61214552326098,0,0,0,0,0.330991955875499,0,0,0,0,0,0.0979923974143777,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0.640358984218058,0.19980960958213,0,0,0,0,0.124252535565433,0.235694034616795,0,0,0,0,0.600420288709789,0.410716136675979,0,0,0,0.279282401272254,0.229160424011684,0,0.199679000498991,0,0,0.0671834724867263,0,0,0.0787831823072236,0.164831716762333,0,0.0984274815147488,0,0,0.272406812223151,0,0,0,0,0,0.0607495566580247,0.335434687599266,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,1.32506888912221,0.129282956361551,0.13223260174269,0,0,0.106787412567695,0.314408610199332,0.414239055347196,2.48083010905975,0.592834895693833,0,0,0,0,0,0,0,0,0.122026264901963,0.500763722825999,1.14681839138014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.967809053062115,0,0,0.163565394255844,0,0.245772908753719,0,0,0.106691729694141,0,0,0.368211900503681,0,0,0,0.107824811396682,0,0,0,0.212574920101683,0.123935764259002,0,0,0,0,0,0,0,1.41696576325585,0.319267718114302,0.41023272848151,0,0.0691572524642179,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,1.56302802246618,0,0,0.147856086217045,0.270150338473579,0,0.206686796501184,0,0.546974809018219,0,0.992422356778588,0,0,0,0.336283722218824,0,0,0,0,0,0.203909198930495,0.328863867814245,0,0,0,0,0,0,0,0,0.0714765441766563,0,0.697448552208751,0,0,0,0,0,0,0.118332000730565,0,0.846774100381858,0.22910686854405,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0.22589216407792,0,0.150962843566674,0,0.218559560503957,0,0,0,0,0.297046400327086,1.2679671827502,0,0,0,0.499705779624645,0,0,0,0.730336388246517,0.458729283404541,0.286679166302903,0.157771562193185,0.0679914901909147,0,0,0,0,0,0,0,0.253397002022874,0.101988829741982,0,0,0,0.0757786982182394,0.535928260312357,0,0.103432995861895,0.213233981900981,0.23806443146374,0.129177819672012,0.124149428591716,0,0,0.808468755832877,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0.402547587182052,0 | ||
|short_description=p@chr3:56802693..56802695,- | |||
}} | }} |
Latest revision as of 22:47, 29 July 2015
Short description: | p@chr3:56802693..56802695, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:56802693..56802695, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 2.07e-13 | 1 |
Ontology term | p-value | n |
---|---|---|
lymph node | 3.50e-14 | 1 |
mixed ectoderm/mesoderm/endoderm-derived structure | 2.40e-07 | 2 |
developing epithelial placode | 2.40e-07 | 2 |
respiratory system arterial blood vessel | 2.40e-07 | 2 |
respiratory system blood vessel | 2.40e-07 | 2 |
respiratory system artery | 2.40e-07 | 2 |
head blood vessel | 2.40e-07 | 2 |
pulmonary artery | 2.40e-07 | 2 |
pulmonary vascular system | 2.40e-07 | 2 |
pharyngeal vasculature | 2.40e-07 | 2 |
truncus arteriosus | 2.40e-07 | 2 |
aortic sac | 2.40e-07 | 2 |
pharyngeal arch artery | 2.40e-07 | 2 |