FFCP PHASE1:Hg19::chr4:66536368..66536382,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2044 | |EntrezGene=2044 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3389 | |HGNC=3389 | ||
|TSSclassifier=strong | |||
|UniProt=F8VP57 | |UniProt=F8VP57 | ||
|association_with_transcript=-155bp_to_ENST00000511294_5end | |||
|cluster_id=chr4:66536368..66536382,- | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_12_at_EPHA5_5end | |||
|id=chr4:66536368..66536382,- | |||
|ontology_enrichment_celltype=CL:1000306!2.35e-12!4;CL:0002547!2.35e-12!4 | |||
|ontology_enrichment_celltype_v019=CL:1000306;9.45e-18;4!CL:0002547;9.45e-18;4!CL:0000138;2.19e-12;6!CL:0000153;1.04e-08;9!CL:0000447;1.04e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:1000306,8.69e-18,4;CL:0002547,8.69e-18,4;CL:0000058,2.19e-12,6;CL:0000138,2.19e-12,6;CL:0000153,1.04e-08,9;CL:0000447,1.04e-08,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3371!7.49e-07!1;DOID:4549!7.49e-07!1;DOID:5861!7.49e-07!1;DOID:6496!7.49e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:3371;1.23e-66;1!DOID:4549;1.23e-66;1!DOID:5861;1.23e-66;1!DOID:6496;1.23e-66;1!DOID:201;2.19e-12;6!DOID:0060100;2.19e-12;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.23e-66,1;DOID:4549,1.23e-66,1;DOID:5861,1.23e-66,1;DOID:6496,1.23e-66,1;DOID:201,2.19e-12,6;DOID:0060100,2.19e-12,6 | |||
|ontology_enrichment_uberon=UBERON:0003075!9.77e-28!86;UBERON:0007284!9.77e-28!86;UBERON:0002346!2.79e-26!90;UBERON:0005743!4.71e-25!86;UBERON:0001049!4.40e-24!57;UBERON:0005068!4.40e-24!57;UBERON:0006241!4.40e-24!57;UBERON:0007135!4.40e-24!57;UBERON:0001017!4.43e-24!82;UBERON:0000955!6.12e-24!69;UBERON:0006238!6.12e-24!69;UBERON:0002616!3.82e-23!59;UBERON:0002298!1.36e-22!8;UBERON:0000073!3.01e-22!94;UBERON:0001016!3.01e-22!94;UBERON:0004733!6.79e-20!12;UBERON:0002028!6.79e-20!12;UBERON:0007277!6.79e-20!12;UBERON:0004732!2.70e-18!13;UBERON:0000033!9.61e-18!123;UBERON:0000153!1.09e-16!129;UBERON:0007811!1.09e-16!129;UBERON:0001896!3.41e-16!3;UBERON:0005290!3.41e-16!3;UBERON:0010096!3.41e-16!3;UBERON:0000988!6.98e-16!3;UBERON:0003076!9.78e-16!15;UBERON:0003057!9.78e-16!15;UBERON:0004121!2.20e-15!169;UBERON:0000924!6.69e-15!173;UBERON:0006601!6.69e-15!173;UBERON:0003056!9.15e-15!61;UBERON:0007023!8.84e-13!115;UBERON:0002619!1.07e-12!22;UBERON:0002020!2.01e-12!34;UBERON:0003528!2.01e-12!34;UBERON:0000415!2.35e-12!4;UBERON:0007240!2.35e-12!4;UBERON:0005742!2.35e-12!4;UBERON:0005734!2.35e-12!4;UBERON:0004664!2.35e-12!4;UBERON:0004663!2.35e-12!4;UBERON:0002780!2.36e-12!41;UBERON:0001890!2.36e-12!41;UBERON:0006240!2.36e-12!41;UBERON:0003080!5.12e-12!42;UBERON:0001905!7.75e-12!2;UBERON:0002757!7.75e-12!2;UBERON:0010134!7.75e-12!2;UBERON:0002784!7.75e-12!2;UBERON:0005408!7.75e-12!2;UBERON:0001899!7.75e-12!2;UBERON:0000956!4.32e-11!25;UBERON:0000203!4.32e-11!25;UBERON:0002148!5.00e-11!2;UBERON:0009662!5.00e-11!2;UBERON:0001950!8.04e-11!20;UBERON:0002791!2.67e-10!33;UBERON:0001893!5.79e-10!34;UBERON:0001872!1.16e-09!5;UBERON:0002680!4.21e-09!9;UBERON:0001895!4.21e-09!9;UBERON:0010092!4.21e-09!9;UBERON:0001869!1.76e-08!32;UBERON:0000025!1.19e-07!194;UBERON:0006331!1.25e-07!3;UBERON:0000064!5.40e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;5.96e-34;2!UBERON:0002757;5.96e-34;2!UBERON:0010134;5.96e-34;2!UBERON:0005408;5.96e-34;2!UBERON:0001899;5.96e-34;2!UBERON:0002418;2.62e-23;3!UBERON:0004755;2.62e-23;3!UBERON:0003296;9.45e-18;4!UBERON:0010133;9.45e-18;4!UBERON:0002784;9.45e-18;4!UBERON:0004797;9.45e-18;4!UBERON:0000415;9.45e-18;4!UBERON:0007240;9.45e-18;4!UBERON:0005742;9.45e-18;4!UBERON:0005734;9.45e-18;4!UBERON:0004664;9.45e-18;4!UBERON:0004663;9.45e-18;4!UBERON:0001894;9.43e-11;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,7.05e-34,2;UBERON:0002757,7.05e-34,2;UBERON:0010134,7.05e-34,2;UBERON:0005408,7.05e-34,2;UBERON:0001899,7.05e-34,2;UBERON:0002418,2.62e-23,3;UBERON:0004755,2.62e-23,3;UBERON:0000415,8.69e-18,4;UBERON:0007240,8.69e-18,4;UBERON:0005742,8.69e-18,4;UBERON:0005734,8.69e-18,4;UBERON:0004664,8.69e-18,4;UBERON:0004663,8.69e-18,4;UBERON:0003296,1.03e-17,4;UBERON:0010133,1.03e-17,4;UBERON:0002784,1.03e-17,4;UBERON:0004797,8.99e-11,7;UBERON:0001894,9.89e-11,7;UBERON:0006222,9.89e-11,7 | |||
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|short_description=p12@EPHA5 | |||
}} | }} |
Latest revision as of 06:14, 18 September 2015
Short description: | p12@EPHA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_EPHA5_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | -155bp_to_ENST00000511294_5end |
EntrezGene: | EPHA5 |
HGNC: | 3389 |
UniProt: | F8VP57 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 8.69e-18 | 4 |
fibroblast of the aortic adventitia | 8.69e-18 | 4 |
chondroblast | 2.19e-12 | 6 |
chondrocyte | 2.19e-12 | 6 |
GAG secreting cell | 1.04e-08 | 9 |
carbohydrate secreting cell | 1.04e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
pineal body | 7.05e-34 | 2 |
regional part of epithalamus | 7.05e-34 | 2 |
secretory circumventricular organ | 7.05e-34 | 2 |
circumventricular organ | 7.05e-34 | 2 |
epithalamus | 7.05e-34 | 2 |
cartilage tissue | 2.62e-23 | 3 |
skeletal tissue | 2.62e-23 | 3 |
artery wall | 8.69e-18 | 4 |
tunica adventitia of artery | 8.69e-18 | 4 |
adventitia | 8.69e-18 | 4 |
tunica adventitia of blood vessel | 8.69e-18 | 4 |
aorta tunica adventitia | 8.69e-18 | 4 |
aorta wall | 8.69e-18 | 4 |
gland of diencephalon | 1.03e-17 | 4 |
neuroendocrine gland | 1.03e-17 | 4 |
regional part of diencephalon | 1.03e-17 | 4 |
blood vessel layer | 8.99e-11 | 7 |
diencephalon | 9.89e-11 | 7 |
future diencephalon | 9.89e-11 | 7 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.23e-66 | 1 |
extraosseous chondrosarcoma | 1.23e-66 | 1 |
myxoid chondrosarcoma | 1.23e-66 | 1 |
extraskeletal myxoid chondrosarcoma | 1.23e-66 | 1 |
connective tissue cancer | 2.19e-12 | 6 |
musculoskeletal system cancer | 2.19e-12 | 6 |