FFCP PHASE1:Hg19::chr5:154135298..154135378,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:154135298..154135378,+ to FFCP PHASE1:Hg19::chr5:154135298..154135378,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23367 | |EntrezGene=23367 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29531 | |HGNC=29531 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=163bp_to_ENST00000518297_5end | |||
|cluster_id=chr5:154135298..154135378,+ | |||
|description=CAGE_peak_2_at_LARP1_5end | |||
|id=chr5:154135298..154135378,+ | |||
|ontology_enrichment_celltype=CL:0000222!3.43e-07!119 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.24e-07,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!6.08e-12!241;UBERON:0000477!4.38e-11!286;UBERON:0007023!1.49e-10!115;UBERON:0000025!2.26e-10!194;UBERON:0003914!1.50e-08!118;UBERON:0000055!2.76e-07!69;UBERON:0000483!4.53e-07!309;UBERON:0000119!4.93e-07!312;UBERON:0000475!5.68e-07!365;UBERON:0001981!7.14e-07!60;UBERON:0007500!7.14e-07!60;UBERON:0004537!7.14e-07!60;UBERON:0006965!7.14e-07!60 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,2.39e-11,240;UBERON:0007023,1.63e-10,114;UBERON:0000025,6.75e-10,192;UBERON:0003914,2.15e-08,117;UBERON:0000055,5.15e-07,68 | |||
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| ||
|short_description=p2@LARP1 | |||
}} | }} |
Latest revision as of 12:08, 16 September 2015
Short description: | p2@LARP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LARP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 163bp_to_ENST00000518297_5end |
EntrezGene: | LARP1 |
HGNC: | 29531 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.24e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 2.39e-11 | 240 |
adult organism | 1.63e-10 | 114 |
tube | 6.75e-10 | 192 |
epithelial tube | 2.15e-08 | 117 |
vessel | 5.15e-07 | 68 |