FFCP PHASE1:Hg19::chr6:21597283..21597312,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:21597283..21597312,+ to FFCP PHASE1:Hg19::chr6:21597283..21597312,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6659 | |EntrezGene=6659 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11200 | |HGNC=11200 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-348bp_to_AJ420500_5end | |||
|cluster_id=chr6:21597283..21597312,+ | |||
|coexpression_cluster_id=C1086 | |||
|description=CAGE_peak_7_at_SOX4_5end | |||
|id=chr6:21597283..21597312,+ | |||
|ontology_enrichment_celltype=CL:0000066!6.17e-19!254;CL:0002321!1.09e-08!248;CL:0000012!2.21e-08!682;CL:0000548!3.31e-08!679;CL:0000004!3.31e-08!679;CL:0000255!3.31e-08!679;CL:0000220!3.89e-08!246 | |||
|ontology_enrichment_celltype_v019=CL:0000540;3.30e-08;6!CL:0000404;3.30e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.26e-13,253;CL:0000540,3.47e-08,6;CL:0000031,3.47e-08,6;CL:0000404,3.47e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000031;3.30e-08;6 | |||
|ontology_enrichment_disease=DOID:14566!1.66e-08!239;DOID:162!4.27e-08!235;DOID:305!4.06e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;5.07e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,3.50e-07,11 | |||
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| ||
|short_description=p7@SOX4 | |||
}} | }} |
Latest revision as of 03:54, 17 September 2015
Short description: | p7@SOX4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SOX4_5end |
Coexpression cluster: | C1086_occipital_parietal_temporal_duodenum_small_Neurons_transitionalcell |
Association with transcript: | -348bp_to_AJ420500_5end |
EntrezGene: | SOX4 |
HGNC: | 11200 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.26e-13 | 253 |
neuron | 3.47e-08 | 6 |
neuroblast | 3.47e-08 | 6 |
electrically signaling cell | 3.47e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
pigment epithelium of eye | 3.50e-07 | 11 |